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The map label for this gene is tlpB [C]

Identifier: 126699175

GI number: 126699175

Start: 1819642

End: 1820727

Strand: Direct

Name: tlpB [C]

Synonym: CD1572

Alternate gene names: 126699175

Gene position: 1819642-1820727 (Clockwise)

Preceding gene: 126699174

Following gene: 126699176

Centisome position: 42.41

GC content: 26.15

Gene sequence:

>1086_bases
ATGTATCCAAATAAAAAACAACAAGAGTTAATTAACAAAACTTTTGGATGTTGTAGATTTGTATATAATAAGTATCTTGC
TAAAAGAATAGAAGTTTATAAAAACAATAAAGAAACTTTTACTTATAAACAGTGTAGTTCTGATTTGACCAATTTAAAAA
AAGAATTAAAATGGCTTAAGGAACCTGACAAATTTTCACTACAAAACGCCTTAAAAGATTTAGATAATGCATATAAAAAA
TTCTTTAAAGAAAAATCAGGATTTCCTAAATTTAAATCAAAGAAAATTAATAGATTTTCATATAAAACTAACTTTACAAA
TGGAAACATTATGTACTTTAGTCAACATATAAAACTACCTAAACTTGGTATGGTTAAGATAAGGGATAAACAAGTACCTC
AAGGTAGAATACTTAATGCTACTATATCTAAAGAACCAAGTGGTAGATATTATGTATCATTATGCTGTACTGATGTAGAC
ATTGAAGCATTTGAAAATACTAACAATCAGATAGGTTTAGATTTAGGAATTAAAGAATTTTGTATCTCAAGTTGTGGAGA
CTTTATAGAAAATCCTAAGTATCTTAAGAAGTCATTAAGCAAACTTGCTAAATTACAAAGAGAATTATCGAGAAAAACAA
TCGGTAGTTTAAATAGAAATAAAGCAAGATTAAAAGTTGCAAGACTTCAAGAACATATAGCTAATCAAAGAAATGATTTT
CTACAAAAACTATCTACTAAATTAATAAAAGAGAATGATATTATTTGCATAGAAGATTTACAAGTAAAGAATATGATTAG
AAATCGTAAACTATCTCGCTTAATTTCTGATGTGTCATGGTCAGAATTTATTCGTCAATTAAAATACAAGGCTAATTGGC
ATGGTAGACAAATTGTAAAGGTAGGTAAATTCTTTGCAAGTTCACAAATATGCAATAAATGTGGGTATAAAAACGAGGAA
GTTAAGGACTTAAATGTAAGAGAATGGATTTGTCCTAGTTGTAATGAAACTCACGATAGAGATATAAATGCAAGTATAAA
TATATTAAAAGAAGGATTAAGACTAATAACGATTCAAAATAAATAA

Upstream 100 bases:

>100_bases
CGTTGCTACTGTATCAGAAAATACAGAGGAGCAGATAAGAAAATATAGAAAAAACAAGTAAAGTGAGGTGGCAGTAGTGG
AAAAAGCTTATAAGTTTAGA

Downstream 100 bases:

>100_bases
CTTATGTAAGAACCGTAGGAACTACGGGGATAGCCTGTGGAGAATTAGTAAGACATATTTTAGTATGCAAAATTTTATGA
AGCAGGAACCCTGTGACTTT

Product: transposase-like protein B

Products: NA

Alternate protein names: ORF401 [H]

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MYPNKKQQELINKTFGCCRFVYNKYLAKRIEVYKNNKETFTYKQCSSDLTNLKKELKWLKEPDKFSLQNALKDLDNAYKK
FFKEKSGFPKFKSKKINRFSYKTNFTNGNIMYFSQHIKLPKLGMVKIRDKQVPQGRILNATISKEPSGRYYVSLCCTDVD
IEAFENTNNQIGLDLGIKEFCISSCGDFIENPKYLKKSLSKLAKLQRELSRKTIGSLNRNKARLKVARLQEHIANQRNDF
LQKLSTKLIKENDIICIEDLQVKNMIRNRKLSRLISDVSWSEFIRQLKYKANWHGRQIVKVGKFFASSQICNKCGYKNEE
VKDLNVREWICPSCNETHDRDINASINILKEGLRLITIQNK

Sequences:

>Translated_361_residues
MYPNKKQQELINKTFGCCRFVYNKYLAKRIEVYKNNKETFTYKQCSSDLTNLKKELKWLKEPDKFSLQNALKDLDNAYKK
FFKEKSGFPKFKSKKINRFSYKTNFTNGNIMYFSQHIKLPKLGMVKIRDKQVPQGRILNATISKEPSGRYYVSLCCTDVD
IEAFENTNNQIGLDLGIKEFCISSCGDFIENPKYLKKSLSKLAKLQRELSRKTIGSLNRNKARLKVARLQEHIANQRNDF
LQKLSTKLIKENDIICIEDLQVKNMIRNRKLSRLISDVSWSEFIRQLKYKANWHGRQIVKVGKFFASSQICNKCGYKNEE
VKDLNVREWICPSCNETHDRDINASINILKEGLRLITIQNK
>Mature_361_residues
MYPNKKQQELINKTFGCCRFVYNKYLAKRIEVYKNNKETFTYKQCSSDLTNLKKELKWLKEPDKFSLQNALKDLDNAYKK
FFKEKSGFPKFKSKKINRFSYKTNFTNGNIMYFSQHIKLPKLGMVKIRDKQVPQGRILNATISKEPSGRYYVSLCCTDVD
IEAFENTNNQIGLDLGIKEFCISSCGDFIENPKYLKKSLSKLAKLQRELSRKTIGSLNRNKARLKVARLQEHIANQRNDF
LQKLSTKLIKENDIICIEDLQVKNMIRNRKLSRLISDVSWSEFIRQLKYKANWHGRQIVKVGKFFASSQICNKCGYKNEE
VKDLNVREWICPSCNETHDRDINASINILKEGLRLITIQNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the transposase 35 family [H]

Homologues:

Organism=Escherichia coli, GI288549314, Length=362, Percent_Identity=33.4254143646409, Blast_Score=187, Evalue=1e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001959
- InterPro:   IPR010095
- InterPro:   IPR021027 [H]

Pfam domain/function: PF12323 HTH_14; PF01385 Transposase_2; PF07282 Transposase_35 [H]

EC number: NA

Molecular weight: Translated: 42339; Mature: 42339

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYPNKKQQELINKTFGCCRFVYNKYLAKRIEVYKNNKETFTYKQCSSDLTNLKKELKWLK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHC
EPDKFSLQNALKDLDNAYKKFFKEKSGFPKFKSKKINRFSYKTNFTNGNIMYFSQHIKLP
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHEEEEEECCCCCEEEEECCCCCC
KLGMVKIRDKQVPQGRILNATISKEPSGRYYVSLCCTDVDIEAFENTNNQIGLDLGIKEF
CCCEEEECCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCHHHHHCCCCEEEEECCHHHH
CISSCGDFIENPKYLKKSLSKLAKLQRELSRKTIGSLNRNKARLKVARLQEHIANQRNDF
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LQKLSTKLIKENDIICIEDLQVKNMIRNRKLSRLISDVSWSEFIRQLKYKANWHGRQIVK
HHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHH
VGKFFASSQICNKCGYKNEEVKDLNVREWICPSCNETHDRDINASINILKEGLRLITIQN
HHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEC
K
C
>Mature Secondary Structure
MYPNKKQQELINKTFGCCRFVYNKYLAKRIEVYKNNKETFTYKQCSSDLTNLKKELKWLK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHC
EPDKFSLQNALKDLDNAYKKFFKEKSGFPKFKSKKINRFSYKTNFTNGNIMYFSQHIKLP
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHEEEEEECCCCCEEEEECCCCCC
KLGMVKIRDKQVPQGRILNATISKEPSGRYYVSLCCTDVDIEAFENTNNQIGLDLGIKEF
CCCEEEECCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCHHHHHCCCCEEEEECCHHHH
CISSCGDFIENPKYLKKSLSKLAKLQRELSRKTIGSLNRNKARLKVARLQEHIANQRNDF
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LQKLSTKLIKENDIICIEDLQVKNMIRNRKLSRLISDVSWSEFIRQLKYKANWHGRQIVK
HHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHH
VGKFFASSQICNKCGYKNEEVKDLNVREWICPSCNETHDRDINASINILKEGLRLITIQN
HHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7665509 [H]