| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is steT [H]
Identifier: 126699159
GI number: 126699159
Start: 1802604
End: 1803947
Strand: Direct
Name: steT [H]
Synonym: CD1555
Alternate gene names: 126699159
Gene position: 1802604-1803947 (Clockwise)
Preceding gene: 126699158
Following gene: 126699160
Centisome position: 42.02
GC content: 33.56
Gene sequence:
>1344_bases ATGAGGAGGAAAAAAATGGGAAGTAATGAACTGAAAAAGACTCTTGGCGTATCAGCAGCATTATCAACTGTTGTTGGTTC CGTTATAGGAGCGGGCGTATTTTTTAAACCACAAGCAGTCTATACATTAACTGGAGGAGCTCCAGGTCTTGGTATATTGG CATGGTTAATAGCTGGAATCATAACTATAACAGCTGGTCTTACAGCTGCAGAGGTATCAGTTGCGATACCAAAAACTGGT GGAATGATGGTATATATAAAAGAAATTTATGGAGAAAAATTAGGTTTTTTAACTGGATGGATGCAAATTGTATTATTTTA TCCAGGGATGATGGCAGCATTAGGTGTTATATTTGGAGAACAAGCATCAGCACTAATTGGTAGTCCATCACTTTTACTTC CAATAGCAATTGGAATTATAATAATAGTTGCAGGGCTTAATATGTTAGGTTCAAAAACTGGAGGAGTCATACAAACTGTT TCTACAATTTGTAAGTTAATACCACTTATTTTAATAATGGTTGTTGGATTTATTAAAGGTGGTGGAAATAATCCAATACT TACACCTATGGTTGGTGAAGGATTAAGCCTGGGTAGTGTACTAGGTCAAGTTTTAATTGCTATATTATTTGCTTTTGATG GATGGATGAATGTTGGTACTTTAGCTGGAGAAATGAAGAATCCTGGAAAAGACCTTCCAAAAGCTATAATAGGTGGATTG TCAGTTGTTATGGCTGTTTATTTTATAATAAATTTAGCGTATCTTTGGGTATTACCAGCTAATGAATTAGCAAATTATGC TTCTCCTGCATCAGCAGTTGCTGAAGTTATATTTGGTTCAATGGGTGGAAAAATAATATCTGTAGGTATATTAATTTCAG TGTTTGGAGCATTAAATGGATTTTTACTAACTGGTTCAAGGGTGGCATATACTTTAGCTACAGATAAGACTTTACCAAAG TATGGTATATTTTCTAAATTAAATTCTGCTCAAGTTCCAGCAAATGCAATAGCATTAGTATCTGTTATTGCATCTATATA TGCTTTGTCAGGTCAATTTAATTTATTAACTGACTTAGCTGTATTTGCTACTTGGATATTCTATGTATTAACTTTTATAG GGGTTATGAAACTTAGAAAGACTCATCCAAATATACCAAGAGAGTATAAAGTTCCATTATATCCTATTGTTCCTATAATA GCTATAGCAAGTGGTATATTTGTTGTAGTTAATCAATTGTGTTTTGCAGGTATGAAAACTACTATGATATCTATAGGAGG TCTTGTAATAACAGCTATAGGCTTACCAGTGTATGCTTATATGACTAGAGGAGTAAAAAGATAA
Upstream 100 bases:
>100_bases AGTAGAGTTTATTTTATTTTAATAAATAATAAAGCTATTTTTCTATATATTGGCATAATATATGCTTATTTAACTATGAA ATTAAAATTAAATAGGATTA
Downstream 100 bases:
>100_bases ACCAAGTAGTTTACAAATGCTTCATAATTAAAATAAAAGAGACTGTCTCAAATAGAGATAAGTCTCTTTTTTATTGTTAA AATGGTAAAGATATGTTTAA
Product: amino acid permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MRRKKMGSNELKKTLGVSAALSTVVGSVIGAGVFFKPQAVYTLTGGAPGLGILAWLIAGIITITAGLTAAEVSVAIPKTG GMMVYIKEIYGEKLGFLTGWMQIVLFYPGMMAALGVIFGEQASALIGSPSLLLPIAIGIIIIVAGLNMLGSKTGGVIQTV STICKLIPLILIMVVGFIKGGGNNPILTPMVGEGLSLGSVLGQVLIAILFAFDGWMNVGTLAGEMKNPGKDLPKAIIGGL SVVMAVYFIINLAYLWVLPANELANYASPASAVAEVIFGSMGGKIISVGILISVFGALNGFLLTGSRVAYTLATDKTLPK YGIFSKLNSAQVPANAIALVSVIASIYALSGQFNLLTDLAVFATWIFYVLTFIGVMKLRKTHPNIPREYKVPLYPIVPII AIASGIFVVVNQLCFAGMKTTMISIGGLVITAIGLPVYAYMTRGVKR
Sequences:
>Translated_447_residues MRRKKMGSNELKKTLGVSAALSTVVGSVIGAGVFFKPQAVYTLTGGAPGLGILAWLIAGIITITAGLTAAEVSVAIPKTG GMMVYIKEIYGEKLGFLTGWMQIVLFYPGMMAALGVIFGEQASALIGSPSLLLPIAIGIIIIVAGLNMLGSKTGGVIQTV STICKLIPLILIMVVGFIKGGGNNPILTPMVGEGLSLGSVLGQVLIAILFAFDGWMNVGTLAGEMKNPGKDLPKAIIGGL SVVMAVYFIINLAYLWVLPANELANYASPASAVAEVIFGSMGGKIISVGILISVFGALNGFLLTGSRVAYTLATDKTLPK YGIFSKLNSAQVPANAIALVSVIASIYALSGQFNLLTDLAVFATWIFYVLTFIGVMKLRKTHPNIPREYKVPLYPIVPII AIASGIFVVVNQLCFAGMKTTMISIGGLVITAIGLPVYAYMTRGVKR >Mature_447_residues MRRKKMGSNELKKTLGVSAALSTVVGSVIGAGVFFKPQAVYTLTGGAPGLGILAWLIAGIITITAGLTAAEVSVAIPKTG GMMVYIKEIYGEKLGFLTGWMQIVLFYPGMMAALGVIFGEQASALIGSPSLLLPIAIGIIIIVAGLNMLGSKTGGVIQTV STICKLIPLILIMVVGFIKGGGNNPILTPMVGEGLSLGSVLGQVLIAILFAFDGWMNVGTLAGEMKNPGKDLPKAIIGGL SVVMAVYFIINLAYLWVLPANELANYASPASAVAEVIFGSMGGKIISVGILISVFGALNGFLLTGSRVAYTLATDKTLPK YGIFSKLNSAQVPANAIALVSVIASIYALSGQFNLLTDLAVFATWIFYVLTFIGVMKLRKTHPNIPREYKVPLYPIVPII AIASGIFVVVNQLCFAGMKTTMISIGGLVITAIGLPVYAYMTRGVKR
Specific function: Exhibits an obligate exchange activity for serine, threonine and aromatic amino acids [H]
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. L-type amino acid transporter (LAT) (TC 2.A.3.8) family [H]
Homologues:
Organism=Homo sapiens, GI187423910, Length=422, Percent_Identity=28.9099526066351, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI7657591, Length=422, Percent_Identity=28.9099526066351, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI33286428, Length=439, Percent_Identity=28.4738041002278, Blast_Score=149, Evalue=6e-36, Organism=Homo sapiens, GI115648063, Length=444, Percent_Identity=27.2522522522523, Blast_Score=149, Evalue=7e-36, Organism=Homo sapiens, GI115648022, Length=444, Percent_Identity=27.2522522522523, Blast_Score=149, Evalue=7e-36, Organism=Homo sapiens, GI186910308, Length=442, Percent_Identity=26.2443438914027, Blast_Score=145, Evalue=5e-35, Organism=Homo sapiens, GI186910306, Length=442, Percent_Identity=26.2443438914027, Blast_Score=145, Evalue=5e-35, Organism=Homo sapiens, GI186910304, Length=442, Percent_Identity=26.2443438914027, Blast_Score=145, Evalue=5e-35, Organism=Homo sapiens, GI71979932, Length=445, Percent_Identity=28.5393258426966, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI7657683, Length=439, Percent_Identity=27.5626423690205, Blast_Score=135, Evalue=8e-32, Organism=Homo sapiens, GI71999149, Length=402, Percent_Identity=27.363184079602, Blast_Score=120, Evalue=4e-27, Organism=Homo sapiens, GI9790235, Length=438, Percent_Identity=27.3972602739726, Blast_Score=119, Evalue=8e-27, Organism=Homo sapiens, GI258645169, Length=429, Percent_Identity=25.6410256410256, Blast_Score=83, Evalue=5e-16, Organism=Homo sapiens, GI4507047, Length=438, Percent_Identity=26.4840182648402, Blast_Score=83, Evalue=7e-16, Organism=Homo sapiens, GI258614003, Length=430, Percent_Identity=26.046511627907, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI258614005, Length=430, Percent_Identity=26.046511627907, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI33286430, Length=230, Percent_Identity=28.2608695652174, Blast_Score=80, Evalue=6e-15, Organism=Homo sapiens, GI114326544, Length=425, Percent_Identity=24.9411764705882, Blast_Score=79, Evalue=8e-15, Organism=Homo sapiens, GI114326550, Length=425, Percent_Identity=24.9411764705882, Blast_Score=79, Evalue=8e-15, Organism=Escherichia coli, GI87082250, Length=461, Percent_Identity=27.114967462039, Blast_Score=134, Evalue=1e-32, Organism=Escherichia coli, GI2367353, Length=438, Percent_Identity=27.3972602739726, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI87081708, Length=416, Percent_Identity=25.2403846153846, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1788480, Length=463, Percent_Identity=23.3261339092873, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1787890, Length=352, Percent_Identity=27.2727272727273, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1786908, Length=357, Percent_Identity=22.96918767507, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI87081915, Length=410, Percent_Identity=25.1219512195122, Blast_Score=75, Evalue=9e-15, Organism=Escherichia coli, GI1789017, Length=430, Percent_Identity=25.5813953488372, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1790584, Length=379, Percent_Identity=24.802110817942, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1786302, Length=412, Percent_Identity=23.7864077669903, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1786789, Length=441, Percent_Identity=22.9024943310658, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI1790653, Length=427, Percent_Identity=22.0140515222482, Blast_Score=65, Evalue=9e-12, Organism=Escherichia coli, GI1786602, Length=421, Percent_Identity=23.7529691211401, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71982612, Length=419, Percent_Identity=27.2076372315036, Blast_Score=137, Evalue=9e-33, Organism=Caenorhabditis elegans, GI71982608, Length=419, Percent_Identity=27.2076372315036, Blast_Score=137, Evalue=9e-33, Organism=Caenorhabditis elegans, GI32566699, Length=366, Percent_Identity=27.5956284153005, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI71995388, Length=404, Percent_Identity=27.970297029703, Blast_Score=122, Evalue=4e-28, Organism=Caenorhabditis elegans, GI71995382, Length=404, Percent_Identity=27.970297029703, Blast_Score=122, Evalue=5e-28, Organism=Caenorhabditis elegans, GI71993915, Length=405, Percent_Identity=25.679012345679, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17540018, Length=444, Percent_Identity=26.3513513513513, Blast_Score=115, Evalue=4e-26, Organism=Caenorhabditis elegans, GI71990446, Length=469, Percent_Identity=25.7995735607676, Blast_Score=112, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17568033, Length=453, Percent_Identity=25.60706401766, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI71982623, Length=283, Percent_Identity=28.2685512367491, Blast_Score=98, Evalue=9e-21, Organism=Caenorhabditis elegans, GI193208714, Length=415, Percent_Identity=23.855421686747, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI32566695, Length=416, Percent_Identity=23.7980769230769, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71987339, Length=448, Percent_Identity=22.3214285714286, Blast_Score=66, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17532491, Length=425, Percent_Identity=24.7058823529412, Blast_Score=66, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6321492, Length=340, Percent_Identity=22.9411764705882, Blast_Score=83, Evalue=7e-17, Organism=Saccharomyces cerevisiae, GI6321751, Length=411, Percent_Identity=25.7907542579075, Blast_Score=80, Evalue=8e-16, Organism=Drosophila melanogaster, GI24651635, Length=409, Percent_Identity=27.1393643031785, Blast_Score=145, Evalue=4e-35, Organism=Drosophila melanogaster, GI24651633, Length=409, Percent_Identity=27.1393643031785, Blast_Score=145, Evalue=4e-35, Organism=Drosophila melanogaster, GI45550968, Length=445, Percent_Identity=26.5168539325843, Blast_Score=143, Evalue=3e-34, Organism=Drosophila melanogaster, GI19921172, Length=445, Percent_Identity=26.5168539325843, Blast_Score=143, Evalue=3e-34, Organism=Drosophila melanogaster, GI24641995, Length=404, Percent_Identity=27.2277227722772, Blast_Score=142, Evalue=4e-34, Organism=Drosophila melanogaster, GI24641993, Length=404, Percent_Identity=27.2277227722772, Blast_Score=142, Evalue=4e-34, Organism=Drosophila melanogaster, GI21357367, Length=437, Percent_Identity=26.3157894736842, Blast_Score=128, Evalue=9e-30, Organism=Drosophila melanogaster, GI221331183, Length=444, Percent_Identity=25.9009009009009, Blast_Score=126, Evalue=2e-29, Organism=Drosophila melanogaster, GI17647653, Length=444, Percent_Identity=25.9009009009009, Blast_Score=126, Evalue=2e-29, Organism=Drosophila melanogaster, GI24664379, Length=444, Percent_Identity=25.9009009009009, Blast_Score=126, Evalue=2e-29, Organism=Drosophila melanogaster, GI24667468, Length=394, Percent_Identity=26.9035532994924, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24668806, Length=432, Percent_Identity=23.6111111111111, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI21356285, Length=432, Percent_Identity=23.6111111111111, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24668802, Length=432, Percent_Identity=23.6111111111111, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24666159, Length=392, Percent_Identity=24.4897959183673, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI221512776, Length=392, Percent_Identity=24.4897959183673, Blast_Score=75, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 46728; Mature: 46728
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRKKMGSNELKKTLGVSAALSTVVGSVIGAGVFFKPQAVYTLTGGAPGLGILAWLIAGI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEECCCCCHHHHHHHHHHHH ITITAGLTAAEVSVAIPKTGGMMVYIKEIYGEKLGFLTGWMQIVLFYPGMMAALGVIFGE HHHHCCCHHHHEEEEECCCCCEEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QASALIGSPSLLLPIAIGIIIIVAGLNMLGSKTGGVIQTVSTICKLIPLILIMVVGFIKG CHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC GGNNPILTPMVGEGLSLGSVLGQVLIAILFAFDGWMNVGTLAGEMKNPGKDLPKAIIGGL CCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHH SVVMAVYFIINLAYLWVLPANELANYASPASAVAEVIFGSMGGKIISVGILISVFGALNG HHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC FLLTGSRVAYTLATDKTLPKYGIFSKLNSAQVPANAIALVSVIASIYALSGQFNLLTDLA EEEECCEEEEEEECCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH VFATWIFYVLTFIGVMKLRKTHPNIPREYKVPLYPIVPIIAIASGIFVVVNQLCFAGMKT HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TMISIGGLVITAIGLPVYAYMTRGVKR HHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRRKKMGSNELKKTLGVSAALSTVVGSVIGAGVFFKPQAVYTLTGGAPGLGILAWLIAGI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEECCCCCHHHHHHHHHHHH ITITAGLTAAEVSVAIPKTGGMMVYIKEIYGEKLGFLTGWMQIVLFYPGMMAALGVIFGE HHHHCCCHHHHEEEEECCCCCEEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QASALIGSPSLLLPIAIGIIIIVAGLNMLGSKTGGVIQTVSTICKLIPLILIMVVGFIKG CHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC GGNNPILTPMVGEGLSLGSVLGQVLIAILFAFDGWMNVGTLAGEMKNPGKDLPKAIIGGL CCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHH SVVMAVYFIINLAYLWVLPANELANYASPASAVAEVIFGSMGGKIISVGILISVFGALNG HHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC FLLTGSRVAYTLATDKTLPKYGIFSKLNSAQVPANAIALVSVIASIYALSGQFNLLTDLA EEEECCEEEEEEECCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH VFATWIFYVLTFIGVMKLRKTHPNIPREYKVPLYPIVPIIAIASGIFVVVNQLCFAGMKT HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TMISIGGLVITAIGLPVYAYMTRGVKR HHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]