| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is hisI [H]
Identifier: 126699158
GI number: 126699158
Start: 1801149
End: 1801817
Strand: Direct
Name: hisI [H]
Synonym: CD1554
Alternate gene names: 126699158
Gene position: 1801149-1801817 (Clockwise)
Preceding gene: 126699157
Following gene: 126699159
Centisome position: 41.98
GC content: 27.65
Gene sequence:
>669_bases ATGGATAATAAGTGTAACAATGTATACAGTGATGAAGTAGAGAAATTTATAAGAAGTATAAAGTTTGATGATAAAGGGTT AGTCCCTGTTGTTGTTCAAGAGGTAGTTAGCAAAGATGTACTGATGTTAGCATATATGAATAAAGATGCTATAAAGAAAA CCTTAAAAGATAAAATAGCTTGCTATTTTAGTAGAAGTAGACAAGAACTTTGGGTTAAAGGTGAGACATCTGGTAATACT CAAAAAGTAGTTAAGATGTCTTATGATTGTGATGTAGATACTATACTACTTTTTGTTGAACAAACTGGTGTAGCTTGTCA TACAGGCAATTATTCTTGTTTTTACAGAGACTTGTTTGATGATAGTTCAAAAATGGAGCTTGAAGTACAAACAAATATAT TGAAAGAATTATATGATTTAATCAATGAAAGAAAAAATAATCCAGTTGAAGGTTCTTATACTAATTATCTTTTTGAAAAA GGAATAGATAAGATTCTTAAAAAAGTAGGTGAAGAGAGTAGTGAGGTAATTATAGCATCAAAAAATACCGATAAAAGTGA ACTTATTTACGAAATTAGCGATTTAGTATATCATACATTGGTTTTAATGATAGAAAAAGGTGTTGAAATTGATGAAATAA AAAAAGAATTACTTAAAAGAAGAAAATAG
Upstream 100 bases:
>100_bases TCATTTTGGCGAGATAAAAATAAACGATTTAAAGAAATATTTAAAAGACATGGGTGTAGAAGTAAGATTATAAGTTAAAT ACTAAAAGGAGATTAGAAAT
Downstream 100 bases:
>100_bases AATAAGATAGATTAATGGGTAATAAGAAAATATACCGCTTTTAATAAAAAGTGGTATATTTTTTATTTTATATTTTAATT TATAGAATAATATTTAAATT
Product: histidine biosynthesis bifunctional protein
Products: NA
Alternate protein names: Phosphoribosyl-AMP cyclohydrolase; PRA-CH; Phosphoribosyl-ATP pyrophosphatase; PRA-PH [H]
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MDNKCNNVYSDEVEKFIRSIKFDDKGLVPVVVQEVVSKDVLMLAYMNKDAIKKTLKDKIACYFSRSRQELWVKGETSGNT QKVVKMSYDCDVDTILLFVEQTGVACHTGNYSCFYRDLFDDSSKMELEVQTNILKELYDLINERKNNPVEGSYTNYLFEK GIDKILKKVGEESSEVIIASKNTDKSELIYEISDLVYHTLVLMIEKGVEIDEIKKELLKRRK
Sequences:
>Translated_222_residues MDNKCNNVYSDEVEKFIRSIKFDDKGLVPVVVQEVVSKDVLMLAYMNKDAIKKTLKDKIACYFSRSRQELWVKGETSGNT QKVVKMSYDCDVDTILLFVEQTGVACHTGNYSCFYRDLFDDSSKMELEVQTNILKELYDLINERKNNPVEGSYTNYLFEK GIDKILKKVGEESSEVIIASKNTDKSELIYEISDLVYHTLVLMIEKGVEIDEIKKELLKRRK >Mature_222_residues MDNKCNNVYSDEVEKFIRSIKFDDKGLVPVVVQEVVSKDVLMLAYMNKDAIKKTLKDKIACYFSRSRQELWVKGETSGNT QKVVKMSYDCDVDTILLFVEQTGVACHTGNYSCFYRDLFDDSSKMELEVQTNILKELYDLINERKNNPVEGSYTNYLFEK GIDKILKKVGEESSEVIIASKNTDKSELIYEISDLVYHTLVLMIEKGVEIDEIKKELLKRRK
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0139
COG function: function code E; Phosphoribosyl-AMP cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PRA-PH family [H]
Homologues:
Organism=Escherichia coli, GI2367128, Length=197, Percent_Identity=43.1472081218274, Blast_Score=163, Evalue=8e-42, Organism=Saccharomyces cerevisiae, GI6319819, Length=180, Percent_Identity=34.4444444444444, Blast_Score=92, Evalue=9e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023019 - InterPro: IPR008179 - InterPro: IPR021130 - InterPro: IPR002496 - ProDom: PD002610 [H]
Pfam domain/function: PF01502 PRA-CH; PF01503 PRA-PH [H]
EC number: =3.5.4.19; =3.6.1.31 [H]
Molecular weight: Translated: 25676; Mature: 25676
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNKCNNVYSDEVEKFIRSIKFDDKGLVPVVVQEVVSKDVLMLAYMNKDAIKKTLKDKIA CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHH CYFSRSRQELWVKGETSGNTQKVVKMSYDCDVDTILLFVEQTGVACHTGNYSCFYRDLFD HHHHCCCCEEEEECCCCCCCEEEEEEECCCCHHHHEEEEECCCCEEECCCCCEEEHHHHC DSSKMELEVQTNILKELYDLINERKNNPVEGSYTNYLFEKGIDKILKKVGEESSEVIIAS CCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEE KNTDKSELIYEISDLVYHTLVLMIEKGVEIDEIKKELLKRRK CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure MDNKCNNVYSDEVEKFIRSIKFDDKGLVPVVVQEVVSKDVLMLAYMNKDAIKKTLKDKIA CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHH CYFSRSRQELWVKGETSGNTQKVVKMSYDCDVDTILLFVEQTGVACHTGNYSCFYRDLFD HHHHCCCCEEEEECCCCCCCEEEEEEECCCCHHHHEEEEECCCCEEECCCCCEEEHHHHC DSSKMELEVQTNILKELYDLINERKNNPVEGSYTNYLFEKGIDKILKKVGEESSEVIIAS CCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEE KNTDKSELIYEISDLVYHTLVLMIEKGVEIDEIKKELLKRRK CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]