| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is hisH [H]
Identifier: 126699155
GI number: 126699155
Start: 1799057
End: 1799662
Strand: Direct
Name: hisH [H]
Synonym: CD1551
Alternate gene names: 126699155
Gene position: 1799057-1799662 (Clockwise)
Preceding gene: 126699154
Following gene: 126699156
Centisome position: 41.93
GC content: 29.37
Gene sequence:
>606_bases ATGAATATAATAGTAGACTATGGTCTTGGAAATATAGATTCTGTGTCTAGGGGTTTTAGAAAAGCTGGAATAGAAACTAA AATTTCTAGTGATATAGATGAAATAAAACAGGCAGATTCACTTATACTTCCGGGTGTTGGAGCTTTTAGAGATTCTATAA GTGCCTTAGATAAACTAGGATTGATACCAATAATAAAGGAGCATGTTTCTAAGGGTAAATTTATGATAGGTATATGTCTA GGAATGCAATTACTTTATGAAAAAAGTTATGAGTATGGAGAATATGAAGGATTAGGACTTATAAAAGGAAGTATTGATAA ACTGGATATAAGTTTAAAAGTGCCACATATGGGATGGAATAATCTAAAATTTAATAAGGCAAATGATGATATACTTAAAT ATATAAATGAAGATGATTATGTATACTTCGTTCACTCATATTATGCAAATTCATCAAATGAAGAACTAATTGCATTTTCA GAATATGAAAAGAAAATCCCTGCTATTGTTAGAAAAGGCAATGTATATGGTATACAATTTCATCCTGAAAAAAGTGGAGA AGTAGGGTTAAATATATTAAGAGCATATGGGGAGATGATAAAATGA
Upstream 100 bases:
>100_bases CATAAGATAGAAAGTATTTTTAAAGCATTTGCAAGAGCTTTAAAAGAGGGTAGTGAAATAGTTTCTAATGAGATAGCATC TTCAAAGGGGGTTTTGTAGA
Downstream 100 bases:
>100_bases TAATATTTCCAGCAATAGATATAAAAGATAATAAGTGTGTAAGACTCACACAAGGAGAATTTGACAAAGTAAATGTATAT TATGATAATCCATTAGAAGT
Product: imidazole glycerol phosphate synthase subunit HisH
Products: NA
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH [H]
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MNIIVDYGLGNIDSVSRGFRKAGIETKISSDIDEIKQADSLILPGVGAFRDSISALDKLGLIPIIKEHVSKGKFMIGICL GMQLLYEKSYEYGEYEGLGLIKGSIDKLDISLKVPHMGWNNLKFNKANDDILKYINEDDYVYFVHSYYANSSNEELIAFS EYEKKIPAIVRKGNVYGIQFHPEKSGEVGLNILRAYGEMIK
Sequences:
>Translated_201_residues MNIIVDYGLGNIDSVSRGFRKAGIETKISSDIDEIKQADSLILPGVGAFRDSISALDKLGLIPIIKEHVSKGKFMIGICL GMQLLYEKSYEYGEYEGLGLIKGSIDKLDISLKVPHMGWNNLKFNKANDDILKYINEDDYVYFVHSYYANSSNEELIAFS EYEKKIPAIVRKGNVYGIQFHPEKSGEVGLNILRAYGEMIK >Mature_201_residues MNIIVDYGLGNIDSVSRGFRKAGIETKISSDIDEIKQADSLILPGVGAFRDSISALDKLGLIPIIKEHVSKGKFMIGICL GMQLLYEKSYEYGEYEGLGLIKGSIDKLDISLKVPHMGWNNLKFNKANDDILKYINEDDYVYFVHSYYANSSNEELIAFS EYEKKIPAIVRKGNVYGIQFHPEKSGEVGLNILRAYGEMIK
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=198, Percent_Identity=38.8888888888889, Blast_Score=136, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6319725, Length=206, Percent_Identity=31.0679611650485, Blast_Score=95, Evalue=8e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.-
Molecular weight: Translated: 22570; Mature: 22570
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIIVDYGLGNIDSVSRGFRKAGIETKISSDIDEIKQADSLILPGVGAFRDSISALDKLG CEEEEECCCCCHHHHHHHHHHCCCCCHHHCCHHHHHHCCCEECCCCHHHHHHHHHHHHCC LIPIIKEHVSKGKFMIGICLGMQLLYEKSYEYGEYEGLGLIKGSIDKLDISLKVPHMGWN CHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEEECCCCCCC NLKFNKANDDILKYINEDDYVYFVHSYYANSSNEELIAFSEYEKKIPAIVRKGNVYGIQF CEEECCCCHHHHHHCCCCCEEEEEEEEECCCCCCCEEEEHHHHHHHHHHEECCCEEEEEE HPEKSGEVGLNILRAYGEMIK CCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MNIIVDYGLGNIDSVSRGFRKAGIETKISSDIDEIKQADSLILPGVGAFRDSISALDKLG CEEEEECCCCCHHHHHHHHHHCCCCCHHHCCHHHHHHCCCEECCCCHHHHHHHHHHHHCC LIPIIKEHVSKGKFMIGICLGMQLLYEKSYEYGEYEGLGLIKGSIDKLDISLKVPHMGWN CHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEEECCCCCCC NLKFNKANDDILKYINEDDYVYFVHSYYANSSNEELIAFSEYEKKIPAIVRKGNVYGIQF CEEECCCCHHHHHHCCCCCEEEEEEEEECCCCCCCEEEEHHHHHHHHHHEECCCEEEEEE HPEKSGEVGLNILRAYGEMIK CCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1400209; 11337471 [H]