Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is bltR [H]

Identifier: 126699120

GI number: 126699120

Start: 1757492

End: 1758310

Strand: Direct

Name: bltR [H]

Synonym: CD1516

Alternate gene names: 126699120

Gene position: 1757492-1758310 (Clockwise)

Preceding gene: 126699119

Following gene: 126699124

Centisome position: 40.96

GC content: 24.05

Gene sequence:

>819_bases
TTGGAAAAACAGTATTTTACAACAGGTGAATTTGCTAAATTGTGTGGTATATCTAAGCAGACATTAATTTTCTATGACAA
AATAGGTATTTTTTCTCCTGAATATAAAGATAAAAATAATTATAGATATTACTCAGTTTATCAATATGATACACTTGATA
TATTACAATCATTAAGAGAAATAGGAATGAGTTTAGAGGAAATAAAAGAGTATATACAAAATAGAACTCCCCAGCTTTGT
GTGAAAATGCTTAAAGAAGAAGAAAAAAAGATAAGAGAAAAAATAAAAAAACTAAGAAAGATAAGTTCTAAGATGCAAAA
TAGAATAAATATAACAGTTGAAGGAATTTCTAAAATGAATAGTGAAGAAATTTATATATCCAAAAAGTTTGAAGAATATT
TAGTTCTATCAAGCGATTTGAGTAATATGAGTAATAGTGATTTTATGATGGAATTAATAGATTTTACCAATTATTGTAAA
TCGAAAAATTTGTATCAAGGATATGAGTTGGGAGTAATAGTAAGTAATGAAAATATAAAAAATGGGGACTATTTAAGTAT
ATCAAGTTTTTATTTGAAGATAGATAAAAAAATAAAGGATAAAAAGCTATATGTAAAGCCAGAAGGAATGTATGCTTGCA
TAAAACATATTGGAAAATATGAGGATTCATATAAATCTTACGAAAAATTGAAAAAATATATATATGAAAATGAATATAAA
ATTATTGGAAATTCGTATGAGGAGAGTATACTTGACTTTTTTTGTGAAAGTAATGAAGATAATTATATGACTGAAATTTC
AATCCAAGTATCCAGATAA

Upstream 100 bases:

>100_bases
AAACCATATTGATTTTCTAAAATAATAACTACTTGATTTAGTAAATAATAAAGAATATAGTAACTATATAGACAACAAAA
AGAAAAGGAGTGTATAACCC

Downstream 100 bases:

>100_bases
GAATTAAAATAGAGATATATTCAAATGTTAAGTAATTTTACTTATCATTGAATATATCTCTATGCTTTATAATAAAGTAT
ATAAATTTTTAAATAGTTTC

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MEKQYFTTGEFAKLCGISKQTLIFYDKIGIFSPEYKDKNNYRYYSVYQYDTLDILQSLREIGMSLEEIKEYIQNRTPQLC
VKMLKEEEKKIREKIKKLRKISSKMQNRINITVEGISKMNSEEIYISKKFEEYLVLSSDLSNMSNSDFMMELIDFTNYCK
SKNLYQGYELGVIVSNENIKNGDYLSISSFYLKIDKKIKDKKLYVKPEGMYACIKHIGKYEDSYKSYEKLKKYIYENEYK
IIGNSYEESILDFFCESNEDNYMTEISIQVSR

Sequences:

>Translated_272_residues
MEKQYFTTGEFAKLCGISKQTLIFYDKIGIFSPEYKDKNNYRYYSVYQYDTLDILQSLREIGMSLEEIKEYIQNRTPQLC
VKMLKEEEKKIREKIKKLRKISSKMQNRINITVEGISKMNSEEIYISKKFEEYLVLSSDLSNMSNSDFMMELIDFTNYCK
SKNLYQGYELGVIVSNENIKNGDYLSISSFYLKIDKKIKDKKLYVKPEGMYACIKHIGKYEDSYKSYEKLKKYIYENEYK
IIGNSYEESILDFFCESNEDNYMTEISIQVSR
>Mature_272_residues
MEKQYFTTGEFAKLCGISKQTLIFYDKIGIFSPEYKDKNNYRYYSVYQYDTLDILQSLREIGMSLEEIKEYIQNRTPQLC
VKMLKEEEKKIREKIKKLRKISSKMQNRINITVEGISKMNSEEIYISKKFEEYLVLSSDLSNMSNSDFMMELIDFTNYCK
SKNLYQGYELGVIVSNENIKNGDYLSISSFYLKIDKKIKDKKLYVKPEGMYACIKHIGKYEDSYKSYEKLKKYIYENEYK
IIGNSYEESILDFFCESNEDNYMTEISIQVSR

Specific function: Activates transcription of the blt gene in response to structurally dissimilar drugs [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR011256
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 32411; Mature: 32411

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKQYFTTGEFAKLCGISKQTLIFYDKIGIFSPEYKDKNNYRYYSVYQYDTLDILQSLRE
CCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHH
IGMSLEEIKEYIQNRTPQLCVKMLKEEEKKIREKIKKLRKISSKMQNRINITVEGISKMN
HCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEHHCCC
SEEIYISKKFEEYLVLSSDLSNMSNSDFMMELIDFTNYCKSKNLYQGYELGVIVSNENIK
CCEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCC
NGDYLSISSFYLKIDKKIKDKKLYVKPEGMYACIKHIGKYEDSYKSYEKLKKYIYENEYK
CCCEEEEEHHEEEECCCCCCCEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEE
IIGNSYEESILDFFCESNEDNYMTEISIQVSR
EECCCHHHHHHHHHHCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MEKQYFTTGEFAKLCGISKQTLIFYDKIGIFSPEYKDKNNYRYYSVYQYDTLDILQSLRE
CCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHH
IGMSLEEIKEYIQNRTPQLCVKMLKEEEKKIREKIKKLRKISSKMQNRINITVEGISKMN
HCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEHHCCC
SEEIYISKKFEEYLVLSSDLSNMSNSDFMMELIDFTNYCKSKNLYQGYELGVIVSNENIK
CCEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCC
NGDYLSISSFYLKIDKKIKDKKLYVKPEGMYACIKHIGKYEDSYKSYEKLKKYIYENEYK
CCCEEEEEHHEEEECCCCCCCEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEE
IIGNSYEESILDFFCESNEDNYMTEISIQVSR
EECCCHHHHHHHHHHCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7608059; 8969508; 9384377 [H]