Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699113

Identifier: 126699113

GI number: 126699113

Start: 1746150

End: 1746719

Strand: Direct

Name: 126699113

Synonym: CD1509

Alternate gene names: NA

Gene position: 1746150-1746719 (Clockwise)

Preceding gene: 126699112

Following gene: 126699119

Centisome position: 40.7

GC content: 25.26

Gene sequence:

>570_bases
ATGAAGAAATTTATTATATGTATTATAATGTTTGCAATATCAGTACTGGTGTTAGCTGGTTGTACTAATGATAATAAGAT
AAAAAATGAAGTGGATAGTATGTTTAATTCAATAAAAACACAAGATGCAGATACTGTTGATAAGTATTTCCCAAAATCAG
GGTTAGGTAATCTTATATACGAAGATAAAGAAGGATTTAAAATGTATTCTAAAAATATGACTTGGGAAATTTCAGATATA
AAGAATAATAAGGATAAAGTGACTGTAGATTTAAAAATTAACAATACTGATATGGTTTCTATTTTAAAAAAGAATCCTCC
TAAACTAGGAGAAATGATGCCAAATCCAACTATGAAAGATATTGATTCTGCAAAGAAAAAAGAATTTAATATTACATTAG
AGCTTGTTAAATCTGGTGATAATTATGTTTGTAAAGTTAATCAAGAATCTGCAATGAAATTATTAAATGTGATTACAGGA
GGTGGTATAGATTATCTAGCTGACTATAATAAAGATTATTATAAACAGCTTGATGAAGAACAAAAAAATTATGAAAATAA
AAATAGTTAG

Upstream 100 bases:

>100_bases
TGTATAAAAGTTTGTCCACAAAATGCAATTACTACAACTTTTTCAAAAGATAAAAAAGAGAATAATATTTGTGCAAAAAA
GTATAGGGGGATATAATTTA

Downstream 100 bases:

>100_bases
TAATATATATGAAAATCGGAGCAATTAATAATATAGAAACACAAATTAAAAGAATATAAAAGTGGTAGAATGAAAGTCTT
GTAGAAGCTTTTATTCTACC

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKKFIICIIMFAISVLVLAGCTNDNKIKNEVDSMFNSIKTQDADTVDKYFPKSGLGNLIYEDKEGFKMYSKNMTWEISDI
KNNKDKVTVDLKINNTDMVSILKKNPPKLGEMMPNPTMKDIDSAKKKEFNITLELVKSGDNYVCKVNQESAMKLLNVITG
GGIDYLADYNKDYYKQLDEEQKNYENKNS

Sequences:

>Translated_189_residues
MKKFIICIIMFAISVLVLAGCTNDNKIKNEVDSMFNSIKTQDADTVDKYFPKSGLGNLIYEDKEGFKMYSKNMTWEISDI
KNNKDKVTVDLKINNTDMVSILKKNPPKLGEMMPNPTMKDIDSAKKKEFNITLELVKSGDNYVCKVNQESAMKLLNVITG
GGIDYLADYNKDYYKQLDEEQKNYENKNS
>Mature_189_residues
MKKFIICIIMFAISVLVLAGCTNDNKIKNEVDSMFNSIKTQDADTVDKYFPKSGLGNLIYEDKEGFKMYSKNMTWEISDI
KNNKDKVTVDLKINNTDMVSILKKNPPKLGEMMPNPTMKDIDSAKKKEFNITLELVKSGDNYVCKVNQESAMKLLNVITG
GGIDYLADYNKDYYKQLDEEQKNYENKNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21603; Mature: 21603

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFIICIIMFAISVLVLAGCTNDNKIKNEVDSMFNSIKTQDADTVDKYFPKSGLGNLIY
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEE
EDKEGFKMYSKNMTWEISDIKNNKDKVTVDLKINNTDMVSILKKNPPKLGEMMPNPTMKD
ECCCCCEEHHCCCCEEEECCCCCCCEEEEEEEECCCHHHHHHHCCCCHHHHCCCCCCHHH
IDSAKKKEFNITLELVKSGDNYVCKVNQESAMKLLNVITGGGIDYLADYNKDYYKQLDEE
HHHHHHHHHEEEEEEEECCCCEEEEECHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHH
QKNYENKNS
HHCCCCCCC
>Mature Secondary Structure
MKKFIICIIMFAISVLVLAGCTNDNKIKNEVDSMFNSIKTQDADTVDKYFPKSGLGNLIY
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEE
EDKEGFKMYSKNMTWEISDIKNNKDKVTVDLKINNTDMVSILKKNPPKLGEMMPNPTMKD
ECCCCCEEHHCCCCEEEECCCCCCCEEEEEEEECCCHHHHHHHCCCCHHHHCCCCCCHHH
IDSAKKKEFNITLELVKSGDNYVCKVNQESAMKLLNVITGGGIDYLADYNKDYYKQLDEE
HHHHHHHHHEEEEEEEECCCCEEEEECHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHH
QKNYENKNS
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA