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The map label for this gene is yccM [C]

Identifier: 126699112

GI number: 126699112

Start: 1745246

End: 1746145

Strand: Direct

Name: yccM [C]

Synonym: CD1508

Alternate gene names: 126699112

Gene position: 1745246-1746145 (Clockwise)

Preceding gene: 126699111

Following gene: 126699113

Centisome position: 40.68

GC content: 29.33

Gene sequence:

>900_bases
ATGAAGTTATTATCTAAAGTAAATAATAATATAAGACTTATTACTCAAGTTGCATTTACAGCATTAACAAATGGATATGT
AAATGGATTTTTAGAAGGAACTATATATGGAGGAGAAAGTAAAAAATTATGTGTACCTGGATTGAATTGTTATTCATGTC
CAGGTGCACTTGGAGCATGTCCAATAGGTTCATTACAAGCAGTTTTATCAAGCAGAGAGTATAAATTCTCATTTTATGTT
GTTGGTTTTTTAATGGCATTTGGTGCTTTTTTTGGCAGATTTGTTTGTGGTTGGCTTTGTCCCTTTGGACTTGTACAAGA
TTTACTACATAAAGTACCCTTTCCAGTAAAGATAAAAAAAGTTTATGGTGATAAATATCTAAAATATCTAAAGTATATAG
TCTTAATAATGTTTGTAATTATTTTGCCAGTTGCTATTGTAAATGTAGCAGGGGGTGGAAATCCTTGGTTTTGTAAATGG
ATTTGCCCTTCAGGAACACTTTTGGGAGGAATACCACTTATTTTAGGAAATGAGAATTTAAGAGAATCAATAGGATTTTT
ATTTAGCTGGAAGTTAAGTATTTTGCTATTGATATTATTGATGTCAATCATTACTTATAGGCCATTTTGCAAGTATATAT
GCCCTTTAGGAGCAATCCATGGTTTTTTTAATCCTATTTCAATATATAGATTTAAAATTGATAAAGATAAATGTACAAAT
TGTACAGCATGTCAAACAAAATGTAAGCTTGATATACCAATATATAAAGATGTAAATAGTCCAGACTGTATTAGGTGTGG
TGAATGTATAAAAGTTTGTCCACAAAATGCAATTACTACAACTTTTTCAAAAGATAAAAAAGAGAATAATATTTGTGCAA
AAAAGTATAGGGGGATATAA

Upstream 100 bases:

>100_bases
TTTATTGCATTAGGTACATATCGTGGAGAAACAAATACAGTATTAACTAAAGCAATTATGATTTGTCTTGAGTGTATTGG
TATTGGTTAGGAGAAGAGGA

Downstream 100 bases:

>100_bases
TTTAATGAAGAAATTTATTATATGTATTATAATGTTTGCAATATCAGTACTGGTGTTAGCTGGTTGTACTAATGATAATA
AGATAAAAAATGAAGTGGAT

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MKLLSKVNNNIRLITQVAFTALTNGYVNGFLEGTIYGGESKKLCVPGLNCYSCPGALGACPIGSLQAVLSSREYKFSFYV
VGFLMAFGAFFGRFVCGWLCPFGLVQDLLHKVPFPVKIKKVYGDKYLKYLKYIVLIMFVIILPVAIVNVAGGGNPWFCKW
ICPSGTLLGGIPLILGNENLRESIGFLFSWKLSILLLILLMSIITYRPFCKYICPLGAIHGFFNPISIYRFKIDKDKCTN
CTACQTKCKLDIPIYKDVNSPDCIRCGECIKVCPQNAITTTFSKDKKENNICAKKYRGI

Sequences:

>Translated_299_residues
MKLLSKVNNNIRLITQVAFTALTNGYVNGFLEGTIYGGESKKLCVPGLNCYSCPGALGACPIGSLQAVLSSREYKFSFYV
VGFLMAFGAFFGRFVCGWLCPFGLVQDLLHKVPFPVKIKKVYGDKYLKYLKYIVLIMFVIILPVAIVNVAGGGNPWFCKW
ICPSGTLLGGIPLILGNENLRESIGFLFSWKLSILLLILLMSIITYRPFCKYICPLGAIHGFFNPISIYRFKIDKDKCTN
CTACQTKCKLDIPIYKDVNSPDCIRCGECIKVCPQNAITTTFSKDKKENNICAKKYRGI
>Mature_299_residues
MKLLSKVNNNIRLITQVAFTALTNGYVNGFLEGTIYGGESKKLCVPGLNCYSCPGALGACPIGSLQAVLSSREYKFSFYV
VGFLMAFGAFFGRFVCGWLCPFGLVQDLLHKVPFPVKIKKVYGDKYLKYLKYIVLIMFVIILPVAIVNVAGGGNPWFCKW
ICPSGTLLGGIPLILGNENLRESIGFLFSWKLSILLLILLMSIITYRPFCKYICPLGAIHGFFNPISIYRFKIDKDKCTN
CTACQTKCKLDIPIYKDVNSPDCIRCGECIKVCPQNAITTTFSKDKKENNICAKKYRGI

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1787226, Length=237, Percent_Identity=24.0506329113924, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33301; Mature: 33301

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
6.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLSKVNNNIRLITQVAFTALTNGYVNGFLEGTIYGGESKKLCVPGLNCYSCPGALGAC
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEECCCCCCCCCCCCCCC
PIGSLQAVLSSREYKFSFYVVGFLMAFGAFFGRFVCGWLCPFGLVQDLLHKVPFPVKIKK
CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHH
VYGDKYLKYLKYIVLIMFVIILPVAIVNVAGGGNPWFCKWICPSGTLLGGIPLILGNENL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEECCCHH
RESIGFLFSWKLSILLLILLMSIITYRPFCKYICPLGAIHGFFNPISIYRFKIDKDKCTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCC
CTACQTKCKLDIPIYKDVNSPDCIRCGECIKVCPQNAITTTFSKDKKENNICAKKYRGI
CHHHCCCCEECCCEECCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHCCC
>Mature Secondary Structure
MKLLSKVNNNIRLITQVAFTALTNGYVNGFLEGTIYGGESKKLCVPGLNCYSCPGALGAC
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEECCCCCCCCCCCCCCC
PIGSLQAVLSSREYKFSFYVVGFLMAFGAFFGRFVCGWLCPFGLVQDLLHKVPFPVKIKK
CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHH
VYGDKYLKYLKYIVLIMFVIILPVAIVNVAGGGNPWFCKWICPSGTLLGGIPLILGNENL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEECCCHH
RESIGFLFSWKLSILLLILLMSIITYRPFCKYICPLGAIHGFFNPISIYRFKIDKDKCTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCC
CTACQTKCKLDIPIYKDVNSPDCIRCGECIKVCPQNAITTTFSKDKKENNICAKKYRGI
CHHHCCCCEECCCEECCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]