The gene/protein map for NC_009089 is currently unavailable.
Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is mviN [H]

Identifier: 126699103

GI number: 126699103

Start: 1736355

End: 1736753

Strand: Direct

Name: mviN [H]

Synonym: CD1499

Alternate gene names: 126699103

Gene position: 1736355-1736753 (Clockwise)

Preceding gene: 126699102

Following gene: 126699104

Centisome position: 40.47

GC content: 27.82

Gene sequence:

>3427_bases
ATGAGCAAGGTAGCTAAAGCAACTTTTTATTTGATGATAGTTACTATAATCTCTAAGATTCTTGGAATGGGTAGAGAATT
AGTATTATCATCAATTTATGGTACAGGCTTATATACAGAGAGTTATTTAACAGCTATGAATATACCAAATATTATATTTG
CAGCAATAGGTACTGCTATAGTTACTACTTTTATTCCAATGTATCAAGATATAAGTAGTAAACAAGGTGAAAAGCAAGCA
CTAAAGTTTTTAAACAATGTTTTAAATATAATAGTTGGTATATGCATAGTTGTAGCTATATTAGGAGTTATTTTCTCAAA
GCAACTTGTAAGTATATTTGCTATAGGATTTGAAGGAGAGAGGTTTTTACTTACCGTAAAATTTACTAAAATATTGATTA
AAAAATAGCTACGCACACTCGTGACTTTAGTCATGAGTTAGTAGCTAAAATAGTCAGCATATAGGGAAACCTATATGTAG
AGATAGGATAGAACCTATCCAATACTACTTGAATTGCTGGAAACCCCTAAAGCTAATCAAACTAAAACATAAGGATGAAA
TAAACCTAAGTGTGAAAGTTACGAAAGTAGAAAAAATTGGTTAGATGGTATAAGGTTAAATCCTAAGTACTTTAAAATGG
GCAATCAGCAGGTAAACTCCGAATAGGAGAAACTTCAACGACTATTCCTCTTGAGGGAAGTACACTACAAGCTATTGGTA
GTGGAAGTGGGTAGACCTTAACGGATAATGCTGAAGGATAAGATATAGTCTGTGCTTACATGAAAGTGTAAGAAGTTCAT
AAGAGAACTGCATAGGTAGTAGCGAACTTATGTGAACGACAACCTCAAAAATGATAAAAGTTAAGACTTACGGTTCTTAA
ATATGTTATTTAAAATTAAATATAAAACCTTCTAAATAATTGTTTTAAATAATTACATTTGTTAATATTATGATAGGTGA
TTAATAAATTGTTCACCACAGCATTATATAATATATTAAATATTAAAATTATTAAAAAGTGTATCAAAAAACAATTAAAG
TGAGGTGATAGCAGTGAAAAAAGCTTATAAGTTTAGAATATATCCTAATAAAAAACAGCAAGAGTTAATTAACAAAACTT
TTGGATGTTGTAGGTTTGTATATAATAAATATCTTGCTAAAAGAATAGATGTTTATAAAAACGATAAAGAAACTTTTACT
TATAAACAGTGTAGTTCTGATTTGACCAATTTAAAAAAAGAATTAAATTGGCTTAAAGAACCTGATAAATTTTCACTACA
AAACGCCTTAAAAGATTTAGATAATGCATATAAAAAATTCTTTAAAGAAAAGGCAGGATTTCCTAAATTTAAATCAAAGA
AAATTAATAGATTTTCATATAAAACTAACTTTACAAATGGAAACATTATGTATTGTGGTCAACATATAAAACTACCTAAA
CTTGGTATGGTTAAGGTAAGGGATAAACAAGTACCTAAAGGGAGAATACTTAATGCTACTATATCTAAAGAACCAAGTGG
TAGATATTATGTATCATTATGCTGTACTGATGTAGATATTGAAGTATTTGAAAATACTAATAATCATATAGGTTTAGATT
TAGGAATTAAAGAATTTTGTATCTCAAGTTGTGGAGAATTTATAGAAAATCCTAAGTATCTTAAGAAGTCATTAAACAAA
CTTGCTAAATTACAAAGAGAATTATCGAGAAAAACAATCGGTAGTTTAAATAGAAATAAAACAAGATTAAAAGTTGCAAG
ACTTCAAGAACATATAGCTAATCAAAGAAATGATTTTCTACAAAAACTATCTACTAAATTAATAAAAGAGAACGATATTA
TTTGCATAGAAGATTTACAAGTAAAGAATATGATTAGAAATCGTAAACTATCTCGCTTAATTTCTGATGTATCATGGTCA
GAGTTTATTCGTCAATTAGAATACAAGGCTAATTGGCATGGTAGACAAATTGTAAAGGTAGGTAAATTCTTTGCAAGTTC
ACAAATATGTAATAAATGTGGGTATAAAAACGAGGAAGTGAAGGACTTAAATATAAGAGAATGGATTTGTCCTAGTTGTA
ATGAAACTCACGATAGAGATATAAATGCAAGTAGAAATATATTAAAAGAAGGATTAAGATTAATAACGATTCAAAATAAA
TAACTTATGTAAGAACCGTAGGAACTACGGGGATAGCCTGTGGAGAATTAGTAAGACATATTTTAGTATGCAAAATTCTA
TGAAGCAGGAACCCTGTGACTTTAGTCATGGGAGGTTCAGAACAGGAATAATATTCATAGGTATTACAAGTGTTATGTCA
GCATTTTTACAAATTAAAGAGAACTTTATTGTAGTTGGATTTGGAAGTATACCCTATAATATAGTAATAATTATTTCAAT
AATGTTAAGTACCATATTTGGACCATACATACTTCCAATTGGTGCTGTGGTTGCTATGGTAGTTCAACTGCTCTTTTACA
TGTTTTTTGTTAAAAAAACGAACTACAAATACTTATACTACTTAAACTTTAAAGATGATAGCCTTATTAAATTACTAGCA
TTACTTTCACCAGTATTTATAGGTGTTGCTGTTAATCAAGTGAACTCATTGGTAGATACAACTTTAGCCTCAACATTAGT
TAAAGGAAGCATTCCAGCACTTACTTATGCAGATAGATTAAATGGTTTTGTTACAGGAACATTTACAGCTTCAATAGTAT
CTGTTATGTATCCTATGTTATCTAAGTTAAGTGCAGAAAATAATCAAAAGAAGTTTACTAGTTCAGTTAAATCTAGTATA
AATATGATAATAATTTCTATGATTCCTATTTCAGTTGCTTCTATTTTTTTTGCAACTCCTGTTGTTAGAATCATTTTTGA
GAGAGGTGCTTTTGATGCGAGGGCAACCCAAATGACAGCAACTGCCTTAATTTTTTATGCAGTTGGTATGACTGCATTTG
GATTAAGAGATATTTTGGGAAAGGTTTTTTATTCATTACAAGACACAAAAACACCTATGGTAAATGGGATTATATCTGTA
GGGGTAAATATAGTATTGGACTTAGTTTTAATAAAACCAATGGCTCATGGTGGTCTTGCTCTTGCAACTAGTTCATCATC
AATTGCATGTATATTGTTACTCTTCTTGAACCTAAAAAGAAAAGTTGGATATTTTGGACAAGATAAAATAATAAAAGCAA
CTTTGAAATCGGTAGTTGCATCTTTAATTATGGGTGTTTTATCATACTTTACGTATAAATTTATATTTGGAATTTTGGGA
GTAGGAACATTTAATGAGTTTGTATCACTAGCTATTTCAGTTATAGTTGGAGGTGGAATTTATACACTACTAATGACTAT
TTTTAAAGTTGAAGAGGTTGATATGATACTGAATATTGCAAAAAGAAAATTGCATTTAAAAAAGTAA

Upstream 100 bases:

>100_bases
TTTGATAGGGCTAAGCAAGGCAAATTAGTTGATAGAATTATATCTAATGAGCTAAATTTTACTTGATTAAAAAGAGGTAT
GTTAGAAGTGGAGTGATAAA

Downstream 100 bases:

>100_bases
TCTAATTATATTAATTATAAATTTAGGAGGATTTTATGAAACATATATTAAAAACAGTAGACCATACTATTTTAAAAGCT
ACAACTACATGGGAAGATAT

Product: virulence factor MviN-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>514_residues
MSKVAKATFYLMIVTIISKILGMGRELVLSSIYGTGLYTESYLTAMNIPNIIFAAIGTAIVTTFIPMYQDISSKQGEKQA
LKFLNNVLNIIVGICIVVAILGVIFSKQLVSIFAIGFEGERFLLTVKFTKILITGIIFIGITSVMSAFLQIKENFIVVGF
GSIPYNIVIIISIMLSTIFGPYILPIGAVVAMVVQLLFYMFFVKKTNYKYLYYLNFKDDSLIKLLALLSPVFIGVAVNQV
NSLVDTTLASTLVKGSIPALTYADRLNGFVTGTFTASIVSVMYPMLSKLSAENNQKKFTSSVKSSINMIIISMIPISVAS
IFFATPVVRIIFERGAFDARATQMTATALIFYAVGMTAFGLRDILGKVFYSLQDTKTPMVNGIISVGVNIVLDLVLIKPM
AHGGLALATSSSSIACILLLFLNLKRKVGYFGQDKIIKATLKSVVASLIMGVLSYFTYKFIFGILGVGTFNEFVSLAISV
IVGGGIYTLLMTIFKVEEVDMILNIAKRKLHLKK

Sequences:

>Translated_133_residues
MSKVAKATFYLMIVTIISKILGMGRELVLSSIYGTGLYTESYLTAMNIPNIIFAAIGTAIVTTFIPMYQDISSKQGEKQA
LKFLNNVLNIIVGICIVVAILGVIFSKQLVSIFAIGFEGERFLLTVKFTKILI
>Mature_132_residues
SKVAKATFYLMIVTIISKILGMGRELVLSSIYGTGLYTESYLTAMNIPNIIFAAIGTAIVTTFIPMYQDISSKQGEKQAL
KFLNNVLNIIVGICIVVAILGVIFSKQLVSIFAIGFEGERFLLTVKFTKILI

Specific function: Unknown

COG id: COG0728

COG function: function code R; Uncharacterized membrane protein, putative virulence factor

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mviN family [H]

Homologues:

Organism=Escherichia coli, GI1787309, Length=123, Percent_Identity=29.2682926829268, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004268 [H]

Pfam domain/function: PF03023 MVIN [H]

EC number: NA

Molecular weight: Translated: 14591; Mature: 14460

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVAKATFYLMIVTIISKILGMGRELVLSSIYGTGLYTESYLTAMNIPNIIFAAIGTAI
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHH
VTTFIPMYQDISSKQGEKQALKFLNNVLNIIVGICIVVAILGVIFSKQLVSIFAIGFEGE
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RFLLTVKFTKILI
EEEEEEHHHHHCC
>Mature Secondary Structure 
SKVAKATFYLMIVTIISKILGMGRELVLSSIYGTGLYTESYLTAMNIPNIIFAAIGTAI
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHH
VTTFIPMYQDISSKQGEKQALKFLNNVLNIIVGICIVVAILGVIFSKQLVSIFAIGFEGE
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RFLLTVKFTKILI
EEEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10993077 [H]