The gene/protein map for NC_009089 is currently unavailable.
Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699085

Identifier: 126699085

GI number: 126699085

Start: 1717327

End: 1718046

Strand: Direct

Name: 126699085

Synonym: CD1481

Alternate gene names: NA

Gene position: 1717327-1718046 (Clockwise)

Preceding gene: 126699084

Following gene: 126699086

Centisome position: 40.03

GC content: 34.44

Gene sequence:

>720_bases
GTGAATATTATGTTTAAATTTGATGTTACAAACGAGCTTATGTGTATAGCAAGGGGAAGTGGTAAATTTTTTGCAAAAAA
AGGTGCTATGGTAGCCTTTAAAGGAAATTTTAATTTTGAAAAATTGCTGTTAGGTCCAAGTAATGGCGGTGGATTGGGAA
GAGCATTATTAGGTCATGTTCAGAGGTCATTGACAGGAGAACAAATGCCAATAATGGTGGTTGAAGGTGAAGGTGAAATT
TACCTAGCTCAAAATGCTTACCATGTAGATGTAATATCAATTGACCCAGGTGATTCCATTTATGTTGAGAGTGAAAACTT
ATTGGCATTTTCTGAACAATTAAATTACAGTGTAAAATTGATTGGTTCAGGGGTAATATCTCAAAAAGGTCTTTTTACTA
CACATTTAGTAAATAAAACAGGTCAAAATCAAGATGTTGCTATAATAACAGATGGTAATCCTCTAATTCTTGAAGGACCT
TGTTGTGTTGACCCAGATGCATTAGTAGCTTGGACTGGAAGAGAACCATATCCTAAAGTATCAAAACTATCATGGAAGAC
TTTTATTGGTCAGACTTCAGGAGAATCTTATCATATGGAATTTGTTGAACCTGGACAAATAGTCATTATACAACCATCTG
AAAGATTGTCTGGCTTAAAAACAGATTCTACACCTTCTGATAGAATGAGTTCAGGTGGATTAAGACTTGGCATAGATTAA

Upstream 100 bases:

>100_bases
ATTTCATATTTGAAGTAGGTTAGACTATGCTGTAATTTTACTGTATAATTATATATAAATATATGATTAGGAGGGATTAT
TGCTAAATTAAGCAATATAA

Downstream 100 bases:

>100_bases
ATCTTATGATATAGCTTAATTATTATTTAAGATATTAAAAAATAAAAAGGGTAGCAGGGATAGATATGTTAAAAGGAGTT
TTATATGTTTGAGAAAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MNIMFKFDVTNELMCIARGSGKFFAKKGAMVAFKGNFNFEKLLLGPSNGGGLGRALLGHVQRSLTGEQMPIMVVEGEGEI
YLAQNAYHVDVISIDPGDSIYVESENLLAFSEQLNYSVKLIGSGVISQKGLFTTHLVNKTGQNQDVAIITDGNPLILEGP
CCVDPDALVAWTGREPYPKVSKLSWKTFIGQTSGESYHMEFVEPGQIVIIQPSERLSGLKTDSTPSDRMSSGGLRLGID

Sequences:

>Translated_239_residues
MNIMFKFDVTNELMCIARGSGKFFAKKGAMVAFKGNFNFEKLLLGPSNGGGLGRALLGHVQRSLTGEQMPIMVVEGEGEI
YLAQNAYHVDVISIDPGDSIYVESENLLAFSEQLNYSVKLIGSGVISQKGLFTTHLVNKTGQNQDVAIITDGNPLILEGP
CCVDPDALVAWTGREPYPKVSKLSWKTFIGQTSGESYHMEFVEPGQIVIIQPSERLSGLKTDSTPSDRMSSGGLRLGID
>Mature_239_residues
MNIMFKFDVTNELMCIARGSGKFFAKKGAMVAFKGNFNFEKLLLGPSNGGGLGRALLGHVQRSLTGEQMPIMVVEGEGEI
YLAQNAYHVDVISIDPGDSIYVESENLLAFSEQLNYSVKLIGSGVISQKGLFTTHLVNKTGQNQDVAIITDGNPLILEGP
CCVDPDALVAWTGREPYPKVSKLSWKTFIGQTSGESYHMEFVEPGQIVIIQPSERLSGLKTDSTPSDRMSSGGLRLGID

Specific function: Unknown

COG id: COG2013

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25908; Mature: 25908

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIMFKFDVTNELMCIARGSGKFFAKKGAMVAFKGNFNFEKLLLGPSNGGGLGRALLGHV
CCEEEEEECCCEEEEEEECCCCEEEECCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHH
QRSLTGEQMPIMVVEGEGEIYLAQNAYHVDVISIDPGDSIYVESENLLAFSEQLNYSVKL
HHHCCCCCCCEEEEECCCCEEEECCCEEEEEEEECCCCEEEEECCCEEEEECCCCEEEEE
IGSGVISQKGLFTTHLVNKTGQNQDVAIITDGNPLILEGPCCVDPDALVAWTGREPYPKV
EECCCCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEECCCCCCCCCEEEECCCCCCCCH
SKLSWKTFIGQTSGESYHMEFVEPGQIVIIQPSERLSGLKTDSTPSDRMSSGGLRLGID
HHEEEEHEEECCCCCEEEEEEECCCEEEEECCHHHHCCCCCCCCCCHHHCCCCEEEECC
>Mature Secondary Structure
MNIMFKFDVTNELMCIARGSGKFFAKKGAMVAFKGNFNFEKLLLGPSNGGGLGRALLGHV
CCEEEEEECCCEEEEEEECCCCEEEECCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHH
QRSLTGEQMPIMVVEGEGEIYLAQNAYHVDVISIDPGDSIYVESENLLAFSEQLNYSVKL
HHHCCCCCCCEEEEECCCCEEEECCCEEEEEEEECCCCEEEEECCCEEEEECCCCEEEEE
IGSGVISQKGLFTTHLVNKTGQNQDVAIITDGNPLILEGPCCVDPDALVAWTGREPYPKV
EECCCCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEECCCCCCCCCEEEECCCCCCCCH
SKLSWKTFIGQTSGESYHMEFVEPGQIVIIQPSERLSGLKTDSTPSDRMSSGGLRLGID
HHEEEEHEEECCCCCEEEEEEECCCEEEEECCHHHHCCCCCCCCCCHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA