Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is ssuC [H]

Identifier: 126699086

GI number: 126699086

Start: 1718131

End: 1718901

Strand: Direct

Name: ssuC [H]

Synonym: CD1482

Alternate gene names: 126699086

Gene position: 1718131-1718901 (Clockwise)

Preceding gene: 126699085

Following gene: 126699087

Centisome position: 40.05

GC content: 27.5

Gene sequence:

>771_bases
ATGTTTGAGAAAATTCATAAAAGGCTTAAAGGATATTATATTTTTTTAATAATTTTAATTTTATGGAAGATAGTATGTGT
TTTGGGTATATGGAGTAGCTATATTCTGCCTCCTCCTGAAATAGTCTTAGATACTTTTATAAAAATGATATATGACGGTT
CTATTTTCTTAAATGTTTATGCCAGTGTAAGAAGGATATTAATAGGTTTTTTAATAAGTTCATTGATGGCTATACCACTT
GGAGTTTTATTTGGAGTAAATAAAAAAATGTATGAATATTTCAAACCACTATTTGAATTTATGCGAAGTACACCTCCACT
AGCTTTGGTGCCAATGCTTATTTTATGGTTTGGTATAGGTGAAGAATCTAAAATTATAATTATTATTTTGGCATCCTTTT
TTCCAATATTTTTAAATACATTGAAAGGTATAAAAAATTGTGACAATAAATTAATAGAAGTAGGTAAATCTTTTAATTTA
TCTAAAAAGAGAATTTTTTATAAAATAATAATCCCTAATTCTATGCTGGATATTGTTGTTGGACTTAGTTTAGGGCTTGG
GTATAGTTTTAGGGCTATAATTGGAGCAGAGCTTATTGCAGCTTCTTCAGGACTAGGATATTTGATTTCTGATGGAAAAG
ATATGTCTAGAACTGATGTTGTATTGGTAGGAATTTTTGTTATTGGATTTTTAGGTATACTTTCAGATTATCTATTTTCA
AAGATAATAACAAAATTTAGCAAAGGGAAGCAGGTTGATTTAAATGGTTAG

Upstream 100 bases:

>100_bases
ACTTGGCATAGATTAAATCTTATGATATAGCTTAATTATTATTTAAGATATTAAAAAATAAAAAGGGTAGCAGGGATAGA
TATGTTAAAAGGAGTTTTAT

Downstream 100 bases:

>100_bases
AAGTGGATTTTTGCTAGAGAATATATATAAGAAATATTTAGTTGATAATAAAGAGCATTTAGTTCTTGATAATATATCTT
TAAATATATCTAGTGAAGAG

Product: aliphatic sulfonate ABC transporter permease

Products: taurine [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MFEKIHKRLKGYYIFLIILILWKIVCVLGIWSSYILPPPEIVLDTFIKMIYDGSIFLNVYASVRRILIGFLISSLMAIPL
GVLFGVNKKMYEYFKPLFEFMRSTPPLALVPMLILWFGIGEESKIIIIILASFFPIFLNTLKGIKNCDNKLIEVGKSFNL
SKKRIFYKIIIPNSMLDIVVGLSLGLGYSFRAIIGAELIAASSGLGYLISDGKDMSRTDVVLVGIFVIGFLGILSDYLFS
KIITKFSKGKQVDLNG

Sequences:

>Translated_256_residues
MFEKIHKRLKGYYIFLIILILWKIVCVLGIWSSYILPPPEIVLDTFIKMIYDGSIFLNVYASVRRILIGFLISSLMAIPL
GVLFGVNKKMYEYFKPLFEFMRSTPPLALVPMLILWFGIGEESKIIIIILASFFPIFLNTLKGIKNCDNKLIEVGKSFNL
SKKRIFYKIIIPNSMLDIVVGLSLGLGYSFRAIIGAELIAASSGLGYLISDGKDMSRTDVVLVGIFVIGFLGILSDYLFS
KIITKFSKGKQVDLNG
>Mature_256_residues
MFEKIHKRLKGYYIFLIILILWKIVCVLGIWSSYILPPPEIVLDTFIKMIYDGSIFLNVYASVRRILIGFLISSLMAIPL
GVLFGVNKKMYEYFKPLFEFMRSTPPLALVPMLILWFGIGEESKIIIIILASFFPIFLNTLKGIKNCDNKLIEVGKSFNL
SKKRIFYKIIIPNSMLDIVVGLSLGLGYSFRAIIGAELIAASSGLGYLISDGKDMSRTDVVLVGIFVIGFLGILSDYLFS
KIITKFSKGKQVDLNG

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1786564, Length=237, Percent_Identity=32.4894514767932, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI87081802, Length=229, Percent_Identity=35.3711790393013, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI1789033, Length=180, Percent_Identity=28.8888888888889, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1788449, Length=183, Percent_Identity=26.775956284153, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28805; Mature: 28805

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCCCEECCCC
>Mature Secondary Structure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HHHHHHCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: taurine [Periplasm]; ATP; H2O [C]

Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8011666; 9782504; 9384377 [H]