Click here to switch to the map view.

The map label for this gene is 126699078

Identifier: 126699078

GI number: 126699078

Start: 1709318

End: 1709863

Strand: Direct

Name: 126699078

Synonym: CD1474

Alternate gene names: NA

Gene position: 1709318-1709863 (Clockwise)

Preceding gene: 126699077

Following gene: 126699079

Centisome position: 39.84

GC content: 34.62

Gene sequence:

>546_bases
ATGAAGAAATTTGTTTGTACAGTATGTGGATATATACATGAAGGAGATGCTGCACCAGCACAATGTCCAGTATGTAAAGT
TGGAGCTGATAAATTTGAAGAAATGAAAGGCGAAAAAAATTGGGCTGATGAGCACAGAATAGGAGTAGCTCAAGGTGTAG
ATGAAGAAATAATCGAAGGATTAAGAGCTAACTTTGTTGGTGAGTGTACAGAAGTAGGAATGTATTTAGCAATGAGTAGA
CAAGCTGATAGAGAAGGTTATCCAGAAGTAGGAGAAGCTTATAAGAGAATAGCTCTTGAAGAAGCTGAACATGCTGCTAA
ATTTGCAGAACTTCTTGGAGAAGTTGTAGTTGCAGATACAAAAGAAAACTTAAGAGTTAGAGTTGATGCTGAGTATGGTG
CAACTGATGGAAAATTAAAATTAGCTAAGAAAGCAAAAGAATTAGGATTAGATGCTATACATGATACAGTACATGAAATG
TGTAAAGATGAAGCTAGACATGGTAAAGCATTCTTAGGATTATTAAATAGATATTTTGGAAAATAA

Upstream 100 bases:

>100_bases
TTAAAAAAATTGTTTAAAGGTATATGGTGCGGGTATATATAGACTAACTTAATAAATAAAAAATTTAATTTGATATATAA
AATTTAGGAGGAAAGTAATT

Downstream 100 bases:

>100_bases
ATTTAATATAAAGTAGATTTTAGGAGTATCTCACTTATAATTTTTAAAGTTATGAGTGAGATATTTTTTAATTATTTGTA
CTTTATTTTTTATTTCTAAC

Product: ruberythrin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MKKFVCTVCGYIHEGDAAPAQCPVCKVGADKFEEMKGEKNWADEHRIGVAQGVDEEIIEGLRANFVGECTEVGMYLAMSR
QADREGYPEVGEAYKRIALEEAEHAAKFAELLGEVVVADTKENLRVRVDAEYGATDGKLKLAKKAKELGLDAIHDTVHEM
CKDEARHGKAFLGLLNRYFGK

Sequences:

>Translated_181_residues
MKKFVCTVCGYIHEGDAAPAQCPVCKVGADKFEEMKGEKNWADEHRIGVAQGVDEEIIEGLRANFVGECTEVGMYLAMSR
QADREGYPEVGEAYKRIALEEAEHAAKFAELLGEVVVADTKENLRVRVDAEYGATDGKLKLAKKAKELGLDAIHDTVHEM
CKDEARHGKAFLGLLNRYFGK
>Mature_181_residues
MKKFVCTVCGYIHEGDAAPAQCPVCKVGADKFEEMKGEKNWADEHRIGVAQGVDEEIIEGLRANFVGECTEVGMYLAMSR
QADREGYPEVGEAYKRIALEEAEHAAKFAELLGEVVVADTKENLRVRVDAEYGATDGKLKLAKKAKELGLDAIHDTVHEM
CKDEARHGKAFLGLLNRYFGK

Specific function: Unknown

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ferritin-like diiron domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 20008; Mature: 20008

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS50903 RUBREDOXIN_LIKE ; PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFVCTVCGYIHEGDAAPAQCPVCKVGADKFEEMKGEKNWADEHRIGVAQGVDEEIIEG
CCHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHH
LRANFVGECTEVGMYLAMSRQADREGYPEVGEAYKRIALEEAEHAAKFAELLGEVVVADT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KENLRVRVDAEYGATDGKLKLAKKAKELGLDAIHDTVHEMCKDEARHGKAFLGLLNRYFG
CCCCEEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
K
C
>Mature Secondary Structure
MKKFVCTVCGYIHEGDAAPAQCPVCKVGADKFEEMKGEKNWADEHRIGVAQGVDEEIIEG
CCHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHH
LRANFVGECTEVGMYLAMSRQADREGYPEVGEAYKRIALEEAEHAAKFAELLGEVVVADT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KENLRVRVDAEYGATDGKLKLAKKAKELGLDAIHDTVHEMCKDEARHGKAFLGLLNRYFG
CCCCEEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]