| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is msbA [C]
Identifier: 126699077
GI number: 126699077
Start: 1707377
End: 1709200
Strand: Direct
Name: msbA [C]
Synonym: CD1473
Alternate gene names: 126699077
Gene position: 1707377-1709200 (Clockwise)
Preceding gene: 126699076
Following gene: 126699078
Centisome position: 39.8
GC content: 26.21
Gene sequence:
>1824_bases TTGAATTTAAGTACTGGAAATCAGAAGGTCAGTAGATTAAAGAAAAAAGAAAAGCCTAAAGATTTTAAAAAAACGTTTAA AAGAATTTTTATGTACTTTAAAAAAGATAAGAAGATTACTAGATTTATTTTTTTGCTAGTAATAATTGATTCAATTATAT CAACTGTAATACCATATACTATTGGAAAGGTAGTTGACATAATAGATATCGATACTTATTCAAAATCCATTTTCTTAAAA GGAATAATTATTTTACTTTCATTTTATATAATTGAGTTTTCAGTTAAACTGTCTAAGGGGATATGTACAGCTAGATTATC TCAAAGTATAGTTAAAGAAATGAGAAGTAATTTATTTTTAAAATTTAAAAATCTACCAATAACCTTTTTTGATAAAAGTT CTACTGGAGATATTATGAGTAGAGTGACAAATGATGTTGATAATATCAGTACAGGAATATCAAATTCATTAGTACAGTTA ATTACAGGAATCTTAAACATATTGATGACTTTTATTATGATGTTTGTATTAAGCCCAATTTTAACCTTTTGCAGTGTAAT ATTAATACCGATAGTAATGTTTGTGAGTAATTTTATTGCAAAGAGAACTAGAGTTTTTTTTAAGCAACAACAAGTTGAGT TGGGAAAACTAAATGCACATATTGAAGAAATGATATCAAACATAAATGTAGTAAAATCTTTTAATTATGAAAGAAAATCT GTAAATGATTTTAAAGAAGTCAATGATAGACTTCTAAATATTTCCCTTAAATCGCAAATTTACACTTCTCTTTTAATGCC TATTATGAATGTGATTAGTAATATAGGATTTGCAACTATATGTATTATAGGAGGCATTCTTGCATCTAAAGATATTATAA CCATAGGGGTTATAGCTAGTTTTTTAAGTTATGTAAGACAATTTACAAGACCTTTAAATGAATTAGCAAATCTATTTAAT ACATTACTTTCAGCCATAGCTGGATGTGAAAGAGTTTTTGAAATTATAGATGAACAAGAAGAGCAAGAAGTGCATAACAT GTTTAAAAGTGAGATTAACGATAATAAAGATGGTAATTTAAACTCTCATTTTGTAAAGGGAGAAATTGAGCTTAAAGATT TAAGTTTTTCTTATGATTCAAAAAAGAAAATTTTAGATAATATAAACCTAAAAATCAAAGCTGGCACATCAAATGCCATC ATAGGAGAGACGGGAAGTGGAAAAACAACTATTATAAATCTAATTACAAATTTTTATCATATAGATGAAGGAAGTATATT TTTAGATGGTAAGGATATATACTCTATTAACAGAAACTATTTGAGAACTTGTTTTGGAGTAGTTCCACAAGAAGGTTATA TATTCAATGATACAGTTATGGAAAATATAAGGTATGGAAATCTGGAGGCTACTGATGAAGAAGTTATATATGCTAGTAAA ATAGCAAATGCACATAAATTTATAGTTAAAATGCGTGAAGGATATAGTACTGTATTATCGGATAGGGGTGAAGATTTAAG TGAAGGTCAAAAACAATTAATAAGTATTGCTAGAGCAGTATTAAAAAATGCTCCAATACTTATTTTGGATGAGGCTACAA GTAACATAGATATAGCAACAGAAGCTAAAATTCAAGAAGCAATAAATAATTTAACTTATGGAAAGACAAGTATAATTATA GCTCATAGATTAAGTACCATATCAAATTGTGATAATATAATAGTTTTAGAAAATGGTAGAATTGTGGAATCAGGAAATCA TAAAGAATTGATAAAATTAAAGGGACATTATTATAGAAACATATTATTGACACAGGGAAAATAA
Upstream 100 bases:
>100_bases TGCTACACATGAAGATTTACTGGTTAGTTCTCCAATTTATAAAAAAATTTTTGCGTTGCAAAATTTAGTAAGTGAAGATG TAAATTAAGGAGGAAGTATA
Downstream 100 bases:
>100_bases GTATTTAGAAAAAACTTTTAAAAAAATTGTTTAAAGGTATATGGTGCGGGTATATATAGACTAACTTAATAAATAAAAAA TTTAATTTGATATATAAAAT
Product: ABC transporter ATP-binding/permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 607; Mature: 607
Protein sequence:
>607_residues MNLSTGNQKVSRLKKKEKPKDFKKTFKRIFMYFKKDKKITRFIFLLVIIDSIISTVIPYTIGKVVDIIDIDTYSKSIFLK GIIILLSFYIIEFSVKLSKGICTARLSQSIVKEMRSNLFLKFKNLPITFFDKSSTGDIMSRVTNDVDNISTGISNSLVQL ITGILNILMTFIMMFVLSPILTFCSVILIPIVMFVSNFIAKRTRVFFKQQQVELGKLNAHIEEMISNINVVKSFNYERKS VNDFKEVNDRLLNISLKSQIYTSLLMPIMNVISNIGFATICIIGGILASKDIITIGVIASFLSYVRQFTRPLNELANLFN TLLSAIAGCERVFEIIDEQEEQEVHNMFKSEINDNKDGNLNSHFVKGEIELKDLSFSYDSKKKILDNINLKIKAGTSNAI IGETGSGKTTIINLITNFYHIDEGSIFLDGKDIYSINRNYLRTCFGVVPQEGYIFNDTVMENIRYGNLEATDEEVIYASK IANAHKFIVKMREGYSTVLSDRGEDLSEGQKQLISIARAVLKNAPILILDEATSNIDIATEAKIQEAINNLTYGKTSIII AHRLSTISNCDNIIVLENGRIVESGNHKELIKLKGHYYRNILLTQGK
Sequences:
>Translated_607_residues MNLSTGNQKVSRLKKKEKPKDFKKTFKRIFMYFKKDKKITRFIFLLVIIDSIISTVIPYTIGKVVDIIDIDTYSKSIFLK GIIILLSFYIIEFSVKLSKGICTARLSQSIVKEMRSNLFLKFKNLPITFFDKSSTGDIMSRVTNDVDNISTGISNSLVQL ITGILNILMTFIMMFVLSPILTFCSVILIPIVMFVSNFIAKRTRVFFKQQQVELGKLNAHIEEMISNINVVKSFNYERKS VNDFKEVNDRLLNISLKSQIYTSLLMPIMNVISNIGFATICIIGGILASKDIITIGVIASFLSYVRQFTRPLNELANLFN TLLSAIAGCERVFEIIDEQEEQEVHNMFKSEINDNKDGNLNSHFVKGEIELKDLSFSYDSKKKILDNINLKIKAGTSNAI IGETGSGKTTIINLITNFYHIDEGSIFLDGKDIYSINRNYLRTCFGVVPQEGYIFNDTVMENIRYGNLEATDEEVIYASK IANAHKFIVKMREGYSTVLSDRGEDLSEGQKQLISIARAVLKNAPILILDEATSNIDIATEAKIQEAINNLTYGKTSIII AHRLSTISNCDNIIVLENGRIVESGNHKELIKLKGHYYRNILLTQGK >Mature_607_residues MNLSTGNQKVSRLKKKEKPKDFKKTFKRIFMYFKKDKKITRFIFLLVIIDSIISTVIPYTIGKVVDIIDIDTYSKSIFLK GIIILLSFYIIEFSVKLSKGICTARLSQSIVKEMRSNLFLKFKNLPITFFDKSSTGDIMSRVTNDVDNISTGISNSLVQL ITGILNILMTFIMMFVLSPILTFCSVILIPIVMFVSNFIAKRTRVFFKQQQVELGKLNAHIEEMISNINVVKSFNYERKS VNDFKEVNDRLLNISLKSQIYTSLLMPIMNVISNIGFATICIIGGILASKDIITIGVIASFLSYVRQFTRPLNELANLFN TLLSAIAGCERVFEIIDEQEEQEVHNMFKSEINDNKDGNLNSHFVKGEIELKDLSFSYDSKKKILDNINLKIKAGTSNAI IGETGSGKTTIINLITNFYHIDEGSIFLDGKDIYSINRNYLRTCFGVVPQEGYIFNDTVMENIRYGNLEATDEEVIYASK IANAHKFIVKMREGYSTVLSDRGEDLSEGQKQLISIARAVLKNAPILILDEATSNIDIATEAKIQEAINNLTYGKTSIII AHRLSTISNCDNIIVLENGRIVESGNHKELIKLKGHYYRNILLTQGK
Specific function: Involved In Lipid A Export And Possibly Also In Glycerophospholipid Export And For Biogenesis Of The Outer Membrane. Transmembrane Domains (Tmd) Form A Pore In The Inner Membrane And The ATP-Binding Domain (Nbd) Is Responsible For Energy Generation. [C]
COG id: COG1132
COG function: function code V; ABC-type multidrug transport system, ATPase and permease components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI9955966, Length=590, Percent_Identity=29.4915254237288, Blast_Score=283, Evalue=3e-76, Organism=Homo sapiens, GI45243524, Length=590, Percent_Identity=29.4915254237288, Blast_Score=283, Evalue=3e-76, Organism=Homo sapiens, GI156105685, Length=575, Percent_Identity=29.7391304347826, Blast_Score=277, Evalue=2e-74, Organism=Homo sapiens, GI171184400, Length=613, Percent_Identity=28.2218597063622, Blast_Score=273, Evalue=2e-73, Organism=Homo sapiens, GI9955968, Length=584, Percent_Identity=29.9657534246575, Blast_Score=272, Evalue=7e-73, Organism=Homo sapiens, GI9961252, Length=493, Percent_Identity=33.6713995943205, Blast_Score=262, Evalue=6e-70, Organism=Homo sapiens, GI9961250, Length=493, Percent_Identity=33.6713995943205, Blast_Score=262, Evalue=7e-70, Organism=Homo sapiens, GI4505771, Length=493, Percent_Identity=33.6713995943205, Blast_Score=262, Evalue=7e-70, Organism=Homo sapiens, GI42741659, Length=500, Percent_Identity=31.8, Blast_Score=257, Evalue=3e-68, Organism=Homo sapiens, GI255708477, Length=501, Percent_Identity=30.7385229540918, Blast_Score=246, Evalue=4e-65, Organism=Homo sapiens, GI9955963, Length=510, Percent_Identity=29.8039215686275, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI42490749, Length=512, Percent_Identity=30.2734375, Blast_Score=230, Evalue=3e-60, Organism=Homo sapiens, GI21536378, Length=534, Percent_Identity=28.6516853932584, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI9665248, Length=555, Percent_Identity=26.8468468468468, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI73747915, Length=583, Percent_Identity=25.7289879931389, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI148612844, Length=538, Percent_Identity=26.3940520446097, Blast_Score=196, Evalue=8e-50, Organism=Homo sapiens, GI73747917, Length=541, Percent_Identity=25.5083179297597, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI4557481, Length=480, Percent_Identity=27.2916666666667, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI9955970, Length=484, Percent_Identity=26.2396694214876, Blast_Score=179, Evalue=1e-44, Organism=Homo sapiens, GI134142345, Length=480, Percent_Identity=25, Blast_Score=172, Evalue=6e-43, Organism=Homo sapiens, GI134142340, Length=480, Percent_Identity=25, Blast_Score=172, Evalue=6e-43, Organism=Homo sapiens, GI134142342, Length=480, Percent_Identity=25, Blast_Score=172, Evalue=7e-43, Organism=Homo sapiens, GI134142337, Length=480, Percent_Identity=25, Blast_Score=172, Evalue=9e-43, Organism=Homo sapiens, GI190343023, Length=480, Percent_Identity=25, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI89111135, Length=614, Percent_Identity=25.8957654723127, Blast_Score=162, Evalue=7e-40, Organism=Homo sapiens, GI21729873, Length=533, Percent_Identity=25.328330206379, Blast_Score=160, Evalue=4e-39, Organism=Homo sapiens, GI15149474, Length=533, Percent_Identity=25.328330206379, Blast_Score=160, Evalue=4e-39, Organism=Homo sapiens, GI110832837, Length=520, Percent_Identity=26.7307692307692, Blast_Score=152, Evalue=1e-36, Organism=Homo sapiens, GI110832835, Length=533, Percent_Identity=26.078799249531, Blast_Score=150, Evalue=4e-36, Organism=Homo sapiens, GI110832839, Length=533, Percent_Identity=26.078799249531, Blast_Score=150, Evalue=4e-36, Organism=Homo sapiens, GI157502201, Length=506, Percent_Identity=24.5059288537549, Blast_Score=139, Evalue=8e-33, Organism=Homo sapiens, GI118582255, Length=530, Percent_Identity=25.4716981132075, Blast_Score=139, Evalue=9e-33, Organism=Homo sapiens, GI66529005, Length=519, Percent_Identity=23.6994219653179, Blast_Score=132, Evalue=7e-31, Organism=Homo sapiens, GI25914749, Length=473, Percent_Identity=26.215644820296, Blast_Score=132, Evalue=9e-31, Organism=Homo sapiens, GI21729876, Length=501, Percent_Identity=24.750499001996, Blast_Score=123, Evalue=5e-28, Organism=Homo sapiens, GI90421313, Length=493, Percent_Identity=24.3407707910751, Blast_Score=116, Evalue=5e-26, Organism=Homo sapiens, GI134142335, Length=294, Percent_Identity=28.5714285714286, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI255708373, Length=122, Percent_Identity=41.8032786885246, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI255708371, Length=125, Percent_Identity=41.6, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI157502203, Length=481, Percent_Identity=21.6216216216216, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI30795238, Length=259, Percent_Identity=27.4131274131274, Blast_Score=75, Evalue=3e-13, Organism=Homo sapiens, GI27881501, Length=259, Percent_Identity=27.4131274131274, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI105990541, Length=206, Percent_Identity=26.6990291262136, Blast_Score=74, Evalue=5e-13, Organism=Homo sapiens, GI31657092, Length=255, Percent_Identity=24.7058823529412, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI21536376, Length=211, Percent_Identity=27.0142180094787, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI116734710, Length=358, Percent_Identity=23.463687150838, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI150417984, Length=210, Percent_Identity=27.1428571428571, Blast_Score=67, Evalue=7e-11, Organism=Escherichia coli, GI1787143, Length=525, Percent_Identity=34.2857142857143, Blast_Score=316, Evalue=2e-87, Organism=Escherichia coli, GI1786653, Length=594, Percent_Identity=29.1245791245791, Blast_Score=246, Evalue=2e-66, Organism=Escherichia coli, GI1786654, Length=601, Percent_Identity=27.287853577371, Blast_Score=236, Evalue=4e-63, Organism=Escherichia coli, GI1787112, Length=503, Percent_Identity=24.6520874751491, Blast_Score=162, Evalue=4e-41, Organism=Escherichia coli, GI1787113, Length=507, Percent_Identity=20.9072978303748, Blast_Score=123, Evalue=4e-29, Organism=Escherichia coli, GI1787029, Length=229, Percent_Identity=29.6943231441048, Blast_Score=96, Evalue=6e-21, Organism=Escherichia coli, GI1790739, Length=227, Percent_Identity=27.3127753303965, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1789891, Length=236, Percent_Identity=27.9661016949153, Blast_Score=90, Evalue=5e-19, Organism=Escherichia coli, GI1786398, Length=213, Percent_Identity=32.3943661971831, Blast_Score=90, Evalue=5e-19, Organism=Escherichia coli, GI1790162, Length=240, Percent_Identity=29.5833333333333, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1787105, Length=244, Percent_Identity=27.0491803278689, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1787370, Length=230, Percent_Identity=28.695652173913, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI87081709, Length=230, Percent_Identity=29.1304347826087, Blast_Score=86, Evalue=8e-18, Organism=Escherichia coli, GI1788225, Length=236, Percent_Identity=30.0847457627119, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI48995001, Length=223, Percent_Identity=29.1479820627803, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI87081791, Length=225, Percent_Identity=26.6666666666667, Blast_Score=82, Evalue=8e-17, Organism=Escherichia coli, GI1787758, Length=257, Percent_Identity=26.0700389105058, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1789991, Length=219, Percent_Identity=30.5936073059361, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1786563, Length=208, Percent_Identity=30.7692307692308, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI1786319, Length=245, Percent_Identity=27.7551020408163, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI48994943, Length=237, Percent_Identity=28.2700421940928, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1788450, Length=224, Percent_Identity=26.3392857142857, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1786253, Length=235, Percent_Identity=27.6595744680851, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1788506, Length=216, Percent_Identity=28.7037037037037, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1788540, Length=217, Percent_Identity=26.2672811059908, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1788472, Length=213, Percent_Identity=29.1079812206573, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1787712, Length=225, Percent_Identity=26.6666666666667, Blast_Score=76, Evalue=6e-15, Organism=Escherichia coli, GI1786345, Length=236, Percent_Identity=25.8474576271186, Blast_Score=76, Evalue=6e-15, Organism=Escherichia coli, GI1789962, Length=264, Percent_Identity=23.4848484848485, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1788761, Length=222, Percent_Identity=27.9279279279279, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1790467, Length=212, Percent_Identity=27.8301886792453, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI48994883, Length=249, Percent_Identity=26.5060240963855, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI48994997, Length=252, Percent_Identity=25, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1789032, Length=241, Percent_Identity=26.5560165975104, Blast_Score=73, Evalue=6e-14, Organism=Escherichia coli, GI1786698, Length=203, Percent_Identity=25.1231527093596, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI1786703, Length=212, Percent_Identity=26.4150943396226, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1787500, Length=265, Percent_Identity=24.9056603773585, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1786803, Length=226, Percent_Identity=26.1061946902655, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1790190, Length=214, Percent_Identity=26.6355140186916, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1789586, Length=229, Percent_Identity=27.0742358078603, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1788897, Length=209, Percent_Identity=28.2296650717703, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1788210, Length=215, Percent_Identity=27.906976744186, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI87081782, Length=209, Percent_Identity=24.8803827751196, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1788165, Length=239, Percent_Identity=25.5230125523013, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1787089, Length=253, Percent_Identity=26.0869565217391, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI87082267, Length=220, Percent_Identity=20.4545454545455, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI87082268, Length=219, Percent_Identity=26.027397260274, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1790525, Length=210, Percent_Identity=25.7142857142857, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1790544, Length=250, Percent_Identity=24.4, Blast_Score=64, Evalue=3e-11, Organism=Caenorhabditis elegans, GI115533592, Length=500, Percent_Identity=32.6, Blast_Score=285, Evalue=7e-77, Organism=Caenorhabditis elegans, GI17565938, Length=563, Percent_Identity=31.2611012433393, Blast_Score=279, Evalue=4e-75, Organism=Caenorhabditis elegans, GI17511077, Length=604, Percent_Identity=30.9602649006623, Blast_Score=278, Evalue=7e-75, Organism=Caenorhabditis elegans, GI193202349, Length=547, Percent_Identity=31.2614259597806, Blast_Score=261, Evalue=9e-70, Organism=Caenorhabditis elegans, GI71992290, Length=579, Percent_Identity=29.3609671848014, Blast_Score=260, Evalue=1e-69, Organism=Caenorhabditis elegans, GI115535101, Length=585, Percent_Identity=30.4273504273504, Blast_Score=259, Evalue=2e-69, Organism=Caenorhabditis elegans, GI17533971, Length=503, Percent_Identity=31.013916500994, Blast_Score=259, Evalue=2e-69, Organism=Caenorhabditis elegans, GI17543740, Length=570, Percent_Identity=28.9473684210526, Blast_Score=258, Evalue=4e-69, Organism=Caenorhabditis elegans, GI17541710, Length=499, Percent_Identity=30.8617234468938, Blast_Score=251, Evalue=9e-67, Organism=Caenorhabditis elegans, GI17567265, Length=528, Percent_Identity=30.8712121212121, Blast_Score=250, Evalue=1e-66, Organism=Caenorhabditis elegans, GI17567269, Length=507, Percent_Identity=28.9940828402367, Blast_Score=245, Evalue=4e-65, Organism=Caenorhabditis elegans, GI17558664, Length=521, Percent_Identity=30.3262955854127, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI71992285, Length=570, Percent_Identity=30, Blast_Score=237, Evalue=1e-62, Organism=Caenorhabditis elegans, GI71996550, Length=622, Percent_Identity=28.7781350482315, Blast_Score=237, Evalue=2e-62, Organism=Caenorhabditis elegans, GI71984940, Length=582, Percent_Identity=30.4123711340206, Blast_Score=234, Evalue=1e-61, Organism=Caenorhabditis elegans, GI17569145, Length=546, Percent_Identity=29.3040293040293, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI25146777, Length=515, Percent_Identity=30.4854368932039, Blast_Score=230, Evalue=2e-60, Organism=Caenorhabditis elegans, GI193208177, Length=575, Percent_Identity=28, Blast_Score=228, Evalue=8e-60, Organism=Caenorhabditis elegans, GI17569143, Length=534, Percent_Identity=27.3408239700375, Blast_Score=224, Evalue=1e-58, Organism=Caenorhabditis elegans, GI115534520, Length=612, Percent_Identity=26.9607843137255, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI212646699, Length=490, Percent_Identity=32.8571428571429, Blast_Score=221, Evalue=9e-58, Organism=Caenorhabditis elegans, GI193211015, Length=235, Percent_Identity=44.2553191489362, Blast_Score=211, Evalue=1e-54, Organism=Caenorhabditis elegans, GI71996809, Length=235, Percent_Identity=44.2553191489362, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI193211017, Length=235, Percent_Identity=44.2553191489362, Blast_Score=210, Evalue=2e-54, Organism=Caenorhabditis elegans, GI193209708, Length=518, Percent_Identity=30.6949806949807, Blast_Score=206, Evalue=4e-53, Organism=Caenorhabditis elegans, GI32563727, Length=514, Percent_Identity=27.6264591439689, Blast_Score=185, Evalue=5e-47, Organism=Caenorhabditis elegans, GI71988343, Length=462, Percent_Identity=27.9220779220779, Blast_Score=178, Evalue=7e-45, Organism=Caenorhabditis elegans, GI17569081, Length=594, Percent_Identity=24.9158249158249, Blast_Score=176, Evalue=3e-44, Organism=Caenorhabditis elegans, GI71992070, Length=496, Percent_Identity=24.3951612903226, Blast_Score=164, Evalue=2e-40, Organism=Caenorhabditis elegans, GI25146765, Length=496, Percent_Identity=24.3951612903226, Blast_Score=164, Evalue=2e-40, Organism=Caenorhabditis elegans, GI193209740, Length=473, Percent_Identity=27.2727272727273, Blast_Score=162, Evalue=4e-40, Organism=Caenorhabditis elegans, GI17556528, Length=462, Percent_Identity=28.1385281385281, Blast_Score=160, Evalue=2e-39, Organism=Caenorhabditis elegans, GI71992066, Length=497, Percent_Identity=24.9496981891348, Blast_Score=158, Evalue=7e-39, Organism=Caenorhabditis elegans, GI86564969, Length=497, Percent_Identity=24.1448692152917, Blast_Score=155, Evalue=7e-38, Organism=Caenorhabditis elegans, GI17567243, Length=491, Percent_Identity=25.4582484725051, Blast_Score=152, Evalue=7e-37, Organism=Caenorhabditis elegans, GI17551702, Length=517, Percent_Identity=24.5647969052224, Blast_Score=148, Evalue=7e-36, Organism=Caenorhabditis elegans, GI17551700, Length=517, Percent_Identity=24.5647969052224, Blast_Score=148, Evalue=7e-36, Organism=Caenorhabditis elegans, GI71992080, Length=300, Percent_Identity=28.3333333333333, Blast_Score=128, Evalue=7e-30, Organism=Caenorhabditis elegans, GI32566680, Length=293, Percent_Identity=30.0341296928328, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17558094, Length=493, Percent_Identity=23.3265720081136, Blast_Score=115, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17510237, Length=244, Percent_Identity=25, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI115533608, Length=341, Percent_Identity=23.4604105571848, Blast_Score=70, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17565586, Length=232, Percent_Identity=24.1379310344828, Blast_Score=68, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324985, Length=611, Percent_Identity=31.0965630114566, Blast_Score=254, Evalue=2e-68, Organism=Saccharomyces cerevisiae, GI6323959, Length=626, Percent_Identity=30.0319488817891, Blast_Score=238, Evalue=3e-63, Organism=Saccharomyces cerevisiae, GI6323217, Length=601, Percent_Identity=28.2861896838602, Blast_Score=225, Evalue=2e-59, Organism=Saccharomyces cerevisiae, GI6320339, Length=481, Percent_Identity=27.027027027027, Blast_Score=168, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6322980, Length=496, Percent_Identity=25.2016129032258, Blast_Score=154, Evalue=4e-38, Organism=Saccharomyces cerevisiae, GI6322640, Length=486, Percent_Identity=26.5432098765432, Blast_Score=150, Evalue=4e-37, Organism=Saccharomyces cerevisiae, GI6321720, Length=507, Percent_Identity=25.0493096646943, Blast_Score=149, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6321752, Length=497, Percent_Identity=25.7545271629779, Blast_Score=140, Evalue=5e-34, Organism=Saccharomyces cerevisiae, GI6322957, Length=245, Percent_Identity=36.3265306122449, Blast_Score=137, Evalue=4e-33, Organism=Saccharomyces cerevisiae, GI6323014, Length=530, Percent_Identity=26.0377358490566, Blast_Score=135, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6322956, Length=473, Percent_Identity=23.2558139534884, Blast_Score=87, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6320214, Length=267, Percent_Identity=26.2172284644195, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24641565, Length=554, Percent_Identity=30.14440433213, Blast_Score=294, Evalue=1e-79, Organism=Drosophila melanogaster, GI23397593, Length=592, Percent_Identity=28.2094594594595, Blast_Score=270, Evalue=3e-72, Organism=Drosophila melanogaster, GI85726357, Length=557, Percent_Identity=30.8797127468582, Blast_Score=251, Evalue=9e-67, Organism=Drosophila melanogaster, GI24659289, Length=519, Percent_Identity=29.2870905587669, Blast_Score=242, Evalue=5e-64, Organism=Drosophila melanogaster, GI45551501, Length=617, Percent_Identity=29.6596434359805, Blast_Score=241, Evalue=1e-63, Organism=Drosophila melanogaster, GI45551502, Length=599, Percent_Identity=29.7161936560935, Blast_Score=241, Evalue=1e-63, Organism=Drosophila melanogaster, GI21357851, Length=599, Percent_Identity=29.7161936560935, Blast_Score=240, Evalue=2e-63, Organism=Drosophila melanogaster, GI21357907, Length=630, Percent_Identity=26.984126984127, Blast_Score=238, Evalue=9e-63, Organism=Drosophila melanogaster, GI24653245, Length=489, Percent_Identity=29.8568507157464, Blast_Score=237, Evalue=2e-62, Organism=Drosophila melanogaster, GI17136662, Length=517, Percent_Identity=30.3675048355899, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI281363262, Length=451, Percent_Identity=29.7117516629712, Blast_Score=216, Evalue=3e-56, Organism=Drosophila melanogaster, GI45552353, Length=486, Percent_Identity=26.9547325102881, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI24583969, Length=486, Percent_Identity=26.9547325102881, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI45552343, Length=498, Percent_Identity=26.1044176706827, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI45552363, Length=498, Percent_Identity=26.1044176706827, Blast_Score=180, Evalue=3e-45, Organism=Drosophila melanogaster, GI45552349, Length=474, Percent_Identity=26.5822784810127, Blast_Score=177, Evalue=2e-44, Organism=Drosophila melanogaster, GI45552361, Length=474, Percent_Identity=26.5822784810127, Blast_Score=177, Evalue=2e-44, Organism=Drosophila melanogaster, GI45552337, Length=512, Percent_Identity=25.390625, Blast_Score=177, Evalue=2e-44, Organism=Drosophila melanogaster, GI45552347, Length=512, Percent_Identity=25.390625, Blast_Score=177, Evalue=3e-44, Organism=Drosophila melanogaster, GI45552335, Length=481, Percent_Identity=25.987525987526, Blast_Score=176, Evalue=5e-44, Organism=Drosophila melanogaster, GI45552345, Length=481, Percent_Identity=25.987525987526, Blast_Score=176, Evalue=6e-44, Organism=Drosophila melanogaster, GI45552339, Length=474, Percent_Identity=26.1603375527426, Blast_Score=174, Evalue=2e-43, Organism=Drosophila melanogaster, GI45552351, Length=474, Percent_Identity=26.1603375527426, Blast_Score=174, Evalue=2e-43, Organism=Drosophila melanogaster, GI45552359, Length=470, Percent_Identity=25.9574468085106, Blast_Score=172, Evalue=6e-43, Organism=Drosophila melanogaster, GI45550972, Length=470, Percent_Identity=25.9574468085106, Blast_Score=172, Evalue=6e-43, Organism=Drosophila melanogaster, GI45552341, Length=470, Percent_Identity=25.9574468085106, Blast_Score=172, Evalue=7e-43, Organism=Drosophila melanogaster, GI45552357, Length=482, Percent_Identity=25.5186721991701, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI45552355, Length=482, Percent_Identity=25.5186721991701, Blast_Score=170, Evalue=3e-42, Organism=Drosophila melanogaster, GI19920928, Length=506, Percent_Identity=26.6798418972332, Blast_Score=167, Evalue=3e-41, Organism=Drosophila melanogaster, GI221474134, Length=240, Percent_Identity=37.5, Blast_Score=157, Evalue=3e-38, Organism=Drosophila melanogaster, GI24649703, Length=526, Percent_Identity=24.1444866920152, Blast_Score=152, Evalue=9e-37, Organism=Drosophila melanogaster, GI24585091, Length=493, Percent_Identity=24.7464503042596, Blast_Score=149, Evalue=6e-36, Organism=Drosophila melanogaster, GI45550390, Length=549, Percent_Identity=24.2258652094718, Blast_Score=149, Evalue=7e-36, Organism=Drosophila melanogaster, GI24648279, Length=488, Percent_Identity=22.9508196721311, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI281361582, Length=475, Percent_Identity=24.8421052631579, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI62484234, Length=500, Percent_Identity=24.2, Blast_Score=146, Evalue=4e-35, Organism=Drosophila melanogaster, GI221460257, Length=486, Percent_Identity=24.8971193415638, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI24650986, Length=504, Percent_Identity=23.2142857142857, Blast_Score=143, Evalue=3e-34, Organism=Drosophila melanogaster, GI21358185, Length=504, Percent_Identity=23.2142857142857, Blast_Score=143, Evalue=3e-34, Organism=Drosophila melanogaster, GI28574259, Length=524, Percent_Identity=23.4732824427481, Blast_Score=142, Evalue=1e-33, Organism=Drosophila melanogaster, GI24585557, Length=491, Percent_Identity=24.2362525458248, Blast_Score=137, Evalue=3e-32, Organism=Drosophila melanogaster, GI45552437, Length=491, Percent_Identity=24.2362525458248, Blast_Score=137, Evalue=3e-32, Organism=Drosophila melanogaster, GI161077321, Length=472, Percent_Identity=22.8813559322034, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI161078426, Length=515, Percent_Identity=21.9417475728155, Blast_Score=99, Evalue=1e-20, Organism=Drosophila melanogaster, GI161076682, Length=270, Percent_Identity=26.6666666666667, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI161076684, Length=270, Percent_Identity=26.6666666666667, Blast_Score=72, Evalue=2e-12, Organism=Drosophila melanogaster, GI24581617, Length=270, Percent_Identity=26.6666666666667, Blast_Score=72, Evalue=2e-12, Organism=Drosophila melanogaster, GI24581615, Length=270, Percent_Identity=26.6666666666667, Blast_Score=72, Evalue=2e-12, Organism=Drosophila melanogaster, GI85725262, Length=220, Percent_Identity=25.9090909090909, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI221512771, Length=249, Percent_Identity=26.1044176706827, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017940 - InterPro: IPR001140 - InterPro: IPR011527 - InterPro: IPR003593 [H]
Pfam domain/function: PF00664 ABC_membrane; PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 68625; Mature: 68625
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: PS50893 ABC_TRANSPORTER_2 ; PS50929 ABC_TM1F
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSTGNQKVSRLKKKEKPKDFKKTFKRIFMYFKKDKKITRFIFLLVIIDSIISTVIPYT CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH IGKVVDIIDIDTYSKSIFLKGIIILLSFYIIEFSVKLSKGICTARLSQSIVKEMRSNLFL HHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEE KFKNLPITFFDKSSTGDIMSRVTNDVDNISTGISNSLVQLITGILNILMTFIMMFVLSPI EEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTFCSVILIPIVMFVSNFIAKRTRVFFKQQQVELGKLNAHIEEMISNINVVKSFNYERKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHH VNDFKEVNDRLLNISLKSQIYTSLLMPIMNVISNIGFATICIIGGILASKDIITIGVIAS HHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHH FLSYVRQFTRPLNELANLFNTLLSAIAGCERVFEIIDEQEEQEVHNMFKSEINDNKDGNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCC NSHFVKGEIELKDLSFSYDSKKKILDNINLKIKAGTSNAIIGETGSGKTTIINLITNFYH CCCEEEEEEEEEECCCCCCCHHHHHHCCCEEEEECCCCCEEECCCCCCHHHHHHHHHHEE IDEGSIFLDGKDIYSINRNYLRTCFGVVPQEGYIFNDTVMENIRYGNLEATDEEVIYASK ECCCCEEECCCHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHCCCCCCCCCCHHHHHHHH IANAHKFIVKMREGYSTVLSDRGEDLSEGQKQLISIARAVLKNAPILILDEATSNIDIAT HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHH EAKIQEAINNLTYGKTSIIIAHRLSTISNCDNIIVLENGRIVESGNHKELIKLKGHYYRN HHHHHHHHHHCCCCCHHEEHHHHHHHHCCCCCEEEEECCEEEECCCCCCEEEECCCEEEE ILLTQGK EEEECCC >Mature Secondary Structure MNLSTGNQKVSRLKKKEKPKDFKKTFKRIFMYFKKDKKITRFIFLLVIIDSIISTVIPYT CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH IGKVVDIIDIDTYSKSIFLKGIIILLSFYIIEFSVKLSKGICTARLSQSIVKEMRSNLFL HHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEE KFKNLPITFFDKSSTGDIMSRVTNDVDNISTGISNSLVQLITGILNILMTFIMMFVLSPI EEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTFCSVILIPIVMFVSNFIAKRTRVFFKQQQVELGKLNAHIEEMISNINVVKSFNYERKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHH VNDFKEVNDRLLNISLKSQIYTSLLMPIMNVISNIGFATICIIGGILASKDIITIGVIAS HHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHH FLSYVRQFTRPLNELANLFNTLLSAIAGCERVFEIIDEQEEQEVHNMFKSEINDNKDGNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCC NSHFVKGEIELKDLSFSYDSKKKILDNINLKIKAGTSNAIIGETGSGKTTIINLITNFYH CCCEEEEEEEEEECCCCCCCHHHHHHCCCEEEEECCCCCEEECCCCCCHHHHHHHHHHEE IDEGSIFLDGKDIYSINRNYLRTCFGVVPQEGYIFNDTVMENIRYGNLEATDEEVIYASK ECCCCEEECCCHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHCCCCCCCCCCHHHHHHHH IANAHKFIVKMREGYSTVLSDRGEDLSEGQKQLISIARAVLKNAPILILDEATSNIDIAT HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHH EAKIQEAINNLTYGKTSIIIAHRLSTISNCDNIIVLENGRIVESGNHKELIKLKGHYYRN HHHHHHHHHHCCCCCHHEEHHHHHHHHCCCCCEEEEECCEEEECCCCCCEEEECCCEEEE ILLTQGK EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]