| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is yibN [C]
Identifier: 126699074
GI number: 126699074
Start: 1702534
End: 1702833
Strand: Direct
Name: yibN [C]
Synonym: CD1470
Alternate gene names: 126699074
Gene position: 1702534-1702833 (Clockwise)
Preceding gene: 126699072
Following gene: 126699076
Centisome position: 39.68
GC content: 22.33
Gene sequence:
>300_bases ATGTATAAGAATATAAATAAAAAGCAACTTAAAGAAATGATGAAAAATGAAAAGGATGTTTTATTATTAGATGTAAGAAC TAAAGATGAATTTAAGGAATATAAAATAGAAAATGCTATAAATATATCTTTACAAGAGTTAATCAATAATATAGATGAAA TTTACGATTATAAAGATAAGAAAGTAGTAGTTTATTGCAGAAGTGGTCATAGAAGTGTTACTGCATGTAATTTGTTAGCT GAAGAAGGTTTTGAGCATTTATATAATTTAAATTCAGGAATAATTGATTATATGAGTTAA
Upstream 100 bases:
>100_bases CTTTTTATATAACAGAGAAAAATATAAAAATAATATTTGTTGTTGTATAAAGAATAAAGGGTATAGGTAATATATAAATA AAATGGAGGAATTTTAGACA
Downstream 100 bases:
>100_bases ATAATGTAAGTTATACATTAAATACTATGTATAGCTCTGCTTATTAAGTAGGAATATATCTAAATATTTATAAGATAAAT TTAGGAAAGAACGAATTTTT
Product: phage shock protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Rhodanese-Like Domain-Containing Protein; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Rhodanese-Related Sulfurtransferase; Phage Shock Protein; Phage Shock Protein E; Thiosulfate Sulfurtransferase; Molybdopterin Biosynthesis Protein; NADH Oxidase; Rhodanese Domain Sulfurtransferase; Rhodanese-Like Protein
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MYKNINKKQLKEMMKNEKDVLLLDVRTKDEFKEYKIENAINISLQELINNIDEIYDYKDKKVVVYCRSGHRSVTACNLLA EEGFEHLYNLNSGIIDYMS
Sequences:
>Translated_99_residues MYKNINKKQLKEMMKNEKDVLLLDVRTKDEFKEYKIENAINISLQELINNIDEIYDYKDKKVVVYCRSGHRSVTACNLLA EEGFEHLYNLNSGIIDYMS >Mature_99_residues MYKNINKKQLKEMMKNEKDVLLLDVRTKDEFKEYKIENAINISLQELINNIDEIYDYKDKKVVVYCRSGHRSVTACNLLA EEGFEHLYNLNSGIIDYMS
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11728; Mature: 11728
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKNINKKQLKEMMKNEKDVLLLDVRTKDEFKEYKIENAINISLQELINNIDEIYDYKDK CCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCHHCHHHHHHHHHHHHHHCCCCC KVVVYCRSGHRSVTACNLLAEEGFEHLYNLNSGIIDYMS EEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MYKNINKKQLKEMMKNEKDVLLLDVRTKDEFKEYKIENAINISLQELINNIDEIYDYKDK CCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCHHCHHHHHHHHHHHHHHCCCCC KVVVYCRSGHRSVTACNLLAEEGFEHLYNLNSGIIDYMS EEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA