| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699067
Identifier: 126699067
GI number: 126699067
Start: 1691646
End: 1692092
Strand: Direct
Name: 126699067
Synonym: CD1463
Alternate gene names: NA
Gene position: 1691646-1692092 (Clockwise)
Preceding gene: 126699062
Following gene: 126699068
Centisome position: 39.43
GC content: 25.73
Gene sequence:
>447_bases ATGTTAACATATTTAATGAAAAGACAAATGCATAAAAAAGATGATGGAATGAGTAAACCAATGATGATTACAGGAGCTGT AATTACAGGTGTAGGAGCATATGCTGTATATAAAATGGTAAAAAGCCATAAATCTAATTCTCAAATGGTCAATACAAATT ATTATGGAAATAGCGATTATGATGATTATAAATATGACGAATTTGATTATGACTGTGATTGTAGAGACACAAAACAAGAT TATGAATATGAAGAATTAAAAAAAAAAGTAAAAGAATTTAATTCAAGAAGAATAAATTGTGAAAATTGTCCACATGTTTC TCAAGAAGAAATGATGCAATATGTAAATAGTGTTAAAGATGTAAAGGAAGAGCTTGATTTACATGAAGATGCTAAAAAAG ATAATATTTACAAAGAAGATGAATACAAAAAATATGAAGAAGAATAA
Upstream 100 bases:
>100_bases TATTTTGTAAAAATTGTAATTTAAAAAATAACATAATTTTTATTAAAATAATACAGATACTATTTATAGATAGAAATAAA AATTAGAAAGGAGAAAAAAT
Downstream 100 bases:
>100_bases GTAATATTTTGTATAACTGAACAAATAGTAATGTCAAATTATTTAATATCTAGTTTTAATATGTAAGTTGTAACTTAACT TGAAAGAATCAGTATCATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MLTYLMKRQMHKKDDGMSKPMMITGAVITGVGAYAVYKMVKSHKSNSQMVNTNYYGNSDYDDYKYDEFDYDCDCRDTKQD YEYEELKKKVKEFNSRRINCENCPHVSQEEMMQYVNSVKDVKEELDLHEDAKKDNIYKEDEYKKYEEE
Sequences:
>Translated_148_residues MLTYLMKRQMHKKDDGMSKPMMITGAVITGVGAYAVYKMVKSHKSNSQMVNTNYYGNSDYDDYKYDEFDYDCDCRDTKQD YEYEELKKKVKEFNSRRINCENCPHVSQEEMMQYVNSVKDVKEELDLHEDAKKDNIYKEDEYKKYEEE >Mature_148_residues MLTYLMKRQMHKKDDGMSKPMMITGAVITGVGAYAVYKMVKSHKSNSQMVNTNYYGNSDYDDYKYDEFDYDCDCRDTKQD YEYEELKKKVKEFNSRRINCENCPHVSQEEMMQYVNSVKDVKEELDLHEDAKKDNIYKEDEYKKYEEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17772; Mature: 17772
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 6.8 %Met (Translated Protein) 9.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 6.8 %Met (Mature Protein) 9.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTYLMKRQMHKKDDGMSKPMMITGAVITGVGAYAVYKMVKSHKSNSQMVNTNYYGNSDY CHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCC DDYKYDEFDYDCDCRDTKQDYEYEELKKKVKEFNSRRINCENCPHVSQEEMMQYVNSVKD CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH VKEELDLHEDAKKDNIYKEDEYKKYEEE HHHHHHHHHHHHHCCCCCCHHHHHHCCC >Mature Secondary Structure MLTYLMKRQMHKKDDGMSKPMMITGAVITGVGAYAVYKMVKSHKSNSQMVNTNYYGNSDY CHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCC DDYKYDEFDYDCDCRDTKQDYEYEELKKKVKEFNSRRINCENCPHVSQEEMMQYVNSVKD CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH VKEELDLHEDAKKDNIYKEDEYKKYEEE HHHHHHHHHHHHHCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA