| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is yqfN [H]
Identifier: 126699060
GI number: 126699060
Start: 1686037
End: 1686726
Strand: Direct
Name: yqfN [H]
Synonym: CD1456
Alternate gene names: 126699060
Gene position: 1686037-1686726 (Clockwise)
Preceding gene: 126699059
Following gene: 126699061
Centisome position: 39.3
GC content: 29.57
Gene sequence:
>690_bases TTGAAATTAACAGATAGATTATTGAAAATAGCATCATTAGTGTCAGATGGTAAAAAAATAGCTGATATAGGAACGGACCA CGGATACATACCAGTATATTTGTTAAAAGAGGGAAAAGTACCATTTGCAGTGCTAGCGGATGTTAATAAAGGACCTCTTG ACAATGCACATAAAGAAGTCATACAGAACAATCTTTTAGATAAAGTTGATTTACGATTGGGTTCTGGTATAGAGATACTT GAAATAGGGGAAGTAGAAGAAGTGATAATTGCTGGTATGGGTGGAATCTTGATAAGTGAGCTTCTCGAAGCTAAAAAAGA AGTAGCACATAATGTAGAAAAATTAATATTACAGCCAATGCAAGCACAAGAAGAACTTAGATATTACCTTTTAAACAACG GATATGAAATTTTAGAAGAAGTTTTAGTGAGAGAAGATTTTAGAATATATGAGATAATTGTTGCCAAATATACAGGTAAA AATACTATAATAGAAGATGAGATATATTATGAGGTTGGAATAAAGCTTTTAGAAAACAAAGATTCTCTTTTTAATGATTT TATAGAAAAAAAGATAAAGACATATAGTTCTATAGTTAATAAATTAGAAGGGAAAAATGGGGAAGCTATAGATAAGAAGA GAAAGGAAAGCGAAGTTGCAATAAAAAAACTTGAAAATTTAATAAAATAA
Upstream 100 bases:
>100_bases TGTAGTAAAGATTTAATTTTATTTTTGTAGTTATTTCAGTCTAATATCTATAACTTGGATTAAATCCTATAAATAAAGGG AATTGAAAGGAGAATTATAT
Downstream 100 bases:
>100_bases ATAGGAGGTATATATGCTATTAAAGAGTCTAACTAGAAAAATTGAAAAAAAGTATCCTCTAAACTTAGCAGAGGATTGGG ATAATGTAGGTCTTATAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MKLTDRLLKIASLVSDGKKIADIGTDHGYIPVYLLKEGKVPFAVLADVNKGPLDNAHKEVIQNNLLDKVDLRLGSGIEIL EIGEVEEVIIAGMGGILISELLEAKKEVAHNVEKLILQPMQAQEELRYYLLNNGYEILEEVLVREDFRIYEIIVAKYTGK NTIIEDEIYYEVGIKLLENKDSLFNDFIEKKIKTYSSIVNKLEGKNGEAIDKKRKESEVAIKKLENLIK
Sequences:
>Translated_229_residues MKLTDRLLKIASLVSDGKKIADIGTDHGYIPVYLLKEGKVPFAVLADVNKGPLDNAHKEVIQNNLLDKVDLRLGSGIEIL EIGEVEEVIIAGMGGILISELLEAKKEVAHNVEKLILQPMQAQEELRYYLLNNGYEILEEVLVREDFRIYEIIVAKYTGK NTIIEDEIYYEVGIKLLENKDSLFNDFIEKKIKTYSSIVNKLEGKNGEAIDKKRKESEVAIKKLENLIK >Mature_229_residues MKLTDRLLKIASLVSDGKKIADIGTDHGYIPVYLLKEGKVPFAVLADVNKGPLDNAHKEVIQNNLLDKVDLRLGSGIEIL EIGEVEEVIIAGMGGILISELLEAKKEVAHNVEKLILQPMQAQEELRYYLLNNGYEILEEVLVREDFRIYEIIVAKYTGK NTIIEDEIYYEVGIKLLENKDSLFNDFIEKKIKTYSSIVNKLEGKNGEAIDKKRKESEVAIKKLENLIK
Specific function: Unknown
COG id: COG2384
COG function: function code R; Predicted SAM-dependent methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006901 [H]
Pfam domain/function: PF04816 DUF633 [H]
EC number: NA
Molecular weight: Translated: 25928; Mature: 25928
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTDRLLKIASLVSDGKKIADIGTDHGYIPVYLLKEGKVPFAVLADVNKGPLDNAHKEV CCHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCHHHHHH IQNNLLDKVDLRLGSGIEILEIGEVEEVIIAGMGGILISELLEAKKEVAHNVEKLILQPM HHHHHHHHHHHHCCCCCCEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QAQEELRYYLLNNGYEILEEVLVREDFRIYEIIVAKYTGKNTIIEDEIYYEVGIKLLENK HHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHEEEHCCCCCCEECHHHHHHHHHHHHCCC DSLFNDFIEKKIKTYSSIVNKLEGKNGEAIDKKRKESEVAIKKLENLIK HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MKLTDRLLKIASLVSDGKKIADIGTDHGYIPVYLLKEGKVPFAVLADVNKGPLDNAHKEV CCHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCHHHHHH IQNNLLDKVDLRLGSGIEILEIGEVEEVIIAGMGGILISELLEAKKEVAHNVEKLILQPM HHHHHHHHHHHHCCCCCCEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QAQEELRYYLLNNGYEILEEVLVREDFRIYEIIVAKYTGKNTIIEDEIYYEVGIKLLENK HHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHEEEHCCCCCCEECHHHHHHHHHHHHCCC DSLFNDFIEKKIKTYSSIVNKLEGKNGEAIDKKRKESEVAIKKLENLIK HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]