| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699052
Identifier: 126699052
GI number: 126699052
Start: 1678848
End: 1679549
Strand: Direct
Name: 126699052
Synonym: CD1448
Alternate gene names: NA
Gene position: 1678848-1679549 (Clockwise)
Preceding gene: 126699051
Following gene: 126699053
Centisome position: 39.13
GC content: 24.07
Gene sequence:
>702_bases ATGATAGGTTGTATTTATGAAGTATACAATGAAGAGATAACTAAAATAATAGAAAACCAAAACACTTTGGCTGTATATTT AGTGGGTTCTAGTAAAGACGTAGATTTTACTCTTTATGATGTAGAGATAAACGATATTGATGTGTTCGTTTTTGTAAAAG AAGGGGAAAAACAAGAGAGAATACTGTTTAAAAAAAAGGGAATAGAATTTGATGTAAATTACTTTTCAAAAGATGGTGTA AAAAAATTATTATCAAATAGGGAATATTTCTTTGTGAAAGAAATGAAAGATGCTAAAGTACTGTTTGATAGGGAGAATAT ATCACATATTATAAAAGATATAAGTAGAAATATTTACTTAGAAGGACCTAGTAAAATGTCATTAGAGGAAAAGTCTTTTA TAAAGCAAGATATTGGAGCAAAAATATCGAATTTAAAAAATAAAGAAAAATTTGATGTTTTTGAATATCATTTTTTGACG AATTTATATTTAAAAGATATAATAATTGGGTACTTTAATATAAATGATAAATGGGTACCAAAAGACAAAAAATTGCTAAA AGTTTTAAAAAAAGAAAATAATGAGCTTTTTGAACTAGTGTCAAAAGTAAGTGAAAATTATGACTATCAAAGACTTTTAG ATGTTTATAATTATATTTTTAAAGAAATTGAGACAAAAGAGGTTATAAAACTAATCTTCTAG
Upstream 100 bases:
>100_bases AATTGACAAAATAAAATTTAATAAAGAAAATGTTGTTTTTGATAAAATAGTGAAGTTATTAGAATAAATTAAAATATTAA CAATTTGTTGGAGACAAAAG
Downstream 100 bases:
>100_bases TCACAAATCAATGGGGGGAGTTTAAATGAATAAAGTTGATAAAGAAAAGATACAACATGCAGTAAGAGAAATACTAGAGG CAATTGGGGAAGACCCAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MIGCIYEVYNEEITKIIENQNTLAVYLVGSSKDVDFTLYDVEINDIDVFVFVKEGEKQERILFKKKGIEFDVNYFSKDGV KKLLSNREYFFVKEMKDAKVLFDRENISHIIKDISRNIYLEGPSKMSLEEKSFIKQDIGAKISNLKNKEKFDVFEYHFLT NLYLKDIIIGYFNINDKWVPKDKKLLKVLKKENNELFELVSKVSENYDYQRLLDVYNYIFKEIETKEVIKLIF
Sequences:
>Translated_233_residues MIGCIYEVYNEEITKIIENQNTLAVYLVGSSKDVDFTLYDVEINDIDVFVFVKEGEKQERILFKKKGIEFDVNYFSKDGV KKLLSNREYFFVKEMKDAKVLFDRENISHIIKDISRNIYLEGPSKMSLEEKSFIKQDIGAKISNLKNKEKFDVFEYHFLT NLYLKDIIIGYFNINDKWVPKDKKLLKVLKKENNELFELVSKVSENYDYQRLLDVYNYIFKEIETKEVIKLIF >Mature_233_residues MIGCIYEVYNEEITKIIENQNTLAVYLVGSSKDVDFTLYDVEINDIDVFVFVKEGEKQERILFKKKGIEFDVNYFSKDGV KKLLSNREYFFVKEMKDAKVLFDRENISHIIKDISRNIYLEGPSKMSLEEKSFIKQDIGAKISNLKNKEKFDVFEYHFLT NLYLKDIIIGYFNINDKWVPKDKKLLKVLKKENNELFELVSKVSENYDYQRLLDVYNYIFKEIETKEVIKLIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27783; Mature: 27783
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGCIYEVYNEEITKIIENQNTLAVYLVGSSKDVDFTLYDVEINDIDVFVFVKEGEKQER CCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEEEECCEEEEEEEECCCCHHH ILFKKKGIEFDVNYFSKDGVKKLLSNREYFFVKEMKDAKVLFDRENISHIIKDISRNIYL HHHHHCCCEEEECCCCHHHHHHHHCCCCEEEEEECCCCCEEECHHHHHHHHHHHHCCEEE EGPSKMSLEEKSFIKQDIGAKISNLKNKEKFDVFEYHFLTNLYLKDIIIGYFNINDKWVP ECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCC KDKKLLKVLKKENNELFELVSKVSENYDYQRLLDVYNYIFKEIETKEVIKLIF CHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHCC >Mature Secondary Structure MIGCIYEVYNEEITKIIENQNTLAVYLVGSSKDVDFTLYDVEINDIDVFVFVKEGEKQER CCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEEEECCEEEEEEEECCCCHHH ILFKKKGIEFDVNYFSKDGVKKLLSNREYFFVKEMKDAKVLFDRENISHIIKDISRNIYL HHHHHCCCEEEECCCCHHHHHHHHCCCCEEEEEECCCCCEEECHHHHHHHHHHHHCCEEE EGPSKMSLEEKSFIKQDIGAKISNLKNKEKFDVFEYHFLTNLYLKDIIIGYFNINDKWVP ECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCC KDKKLLKVLKKENNELFELVSKVSENYDYQRLLDVYNYIFKEIETKEVIKLIF CHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA