| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is folE
Identifier: 126699053
GI number: 126699053
Start: 1679575
End: 1680147
Strand: Direct
Name: folE
Synonym: CD1449
Alternate gene names: 126699053
Gene position: 1679575-1680147 (Clockwise)
Preceding gene: 126699052
Following gene: 126699054
Centisome position: 39.15
GC content: 35.08
Gene sequence:
>573_bases ATGAATAAAGTTGATAAAGAAAAGATACAACATGCAGTAAGAGAAATACTAGAGGCAATTGGGGAAGACCCAGATAGAGA AGGTCTAATCGAAACTCCAAATAGAGTTGCTAGGATGTATGAAGAGATATTCTCTGGTCTTAGTGAAGAACCAAGAGACC ATTTAAAAGTTCTTTTTGCAGATGAAAAACATGAAGAGTTAGTATTGGTAAAAGATATTCCATTTTATTCATGTTGTGAG CATCATCTAGTTCCTTTCTTTGGAAAAGCTCATATTGCTTATTTACCAAAAGGAGGAAGACTTACAGGGCTTTCTAAACT TGCTAGAGTAATAGATACATTGGCAAAAAGACCACAATTACAAGAAAGAATCACTAAAAATGCTGCAGATATAATAATGG AAGAATTACAACCTTATGGTGTCTTAGTAGTAGTAGAAGCTGAACATATGTGCATGACAATGAGAGGCGTAAAAAAACCA GGTTCAAAAACTGTTACATCAGCAGTGAGAGGAATATTTGAAAAGGACATTGCGTCTAGAGCCGAGGCTATGAGTTTGAT TACTATGAAGTAG
Upstream 100 bases:
>100_bases CAAAGACTTTTAGATGTTTATAATTATATTTTTAAAGAAATTGAGACAAAAGAGGTTATAAAACTAATCTTCTAGTCACA AATCAATGGGGGGAGTTTAA
Downstream 100 bases:
>100_bases CAATTTATTATAGATATAATCATTTATTGAGATAAAATTTAATTTAAGGGAGTGTCATTAATTGTGTTTGATTATGGTAA AAGAACTTATATAATGGGAA
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MNKVDKEKIQHAVREILEAIGEDPDREGLIETPNRVARMYEEIFSGLSEEPRDHLKVLFADEKHEELVLVKDIPFYSCCE HHLVPFFGKAHIAYLPKGGRLTGLSKLARVIDTLAKRPQLQERITKNAADIIMEELQPYGVLVVVEAEHMCMTMRGVKKP GSKTVTSAVRGIFEKDIASRAEAMSLITMK
Sequences:
>Translated_190_residues MNKVDKEKIQHAVREILEAIGEDPDREGLIETPNRVARMYEEIFSGLSEEPRDHLKVLFADEKHEELVLVKDIPFYSCCE HHLVPFFGKAHIAYLPKGGRLTGLSKLARVIDTLAKRPQLQERITKNAADIIMEELQPYGVLVVVEAEHMCMTMRGVKKP GSKTVTSAVRGIFEKDIASRAEAMSLITMK >Mature_190_residues MNKVDKEKIQHAVREILEAIGEDPDREGLIETPNRVARMYEEIFSGLSEEPRDHLKVLFADEKHEELVLVKDIPFYSCCE HHLVPFFGKAHIAYLPKGGRLTGLSKLARVIDTLAKRPQLQERITKNAADIIMEELQPYGVLVVVEAEHMCMTMRGVKKP GSKTVTSAVRGIFEKDIASRAEAMSLITMK
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family
Homologues:
Organism=Homo sapiens, GI66932968, Length=186, Percent_Identity=48.9247311827957, Blast_Score=177, Evalue=6e-45, Organism=Homo sapiens, GI4503949, Length=186, Percent_Identity=48.9247311827957, Blast_Score=177, Evalue=6e-45, Organism=Homo sapiens, GI66932970, Length=156, Percent_Identity=44.8717948717949, Blast_Score=132, Evalue=2e-31, Organism=Homo sapiens, GI66932972, Length=146, Percent_Identity=47.2602739726027, Blast_Score=132, Evalue=3e-31, Organism=Escherichia coli, GI1788476, Length=184, Percent_Identity=36.4130434782609, Blast_Score=114, Evalue=4e-27, Organism=Caenorhabditis elegans, GI17560486, Length=178, Percent_Identity=44.9438202247191, Blast_Score=171, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6321706, Length=182, Percent_Identity=46.1538461538462, Blast_Score=159, Evalue=2e-40, Organism=Drosophila melanogaster, GI24656782, Length=179, Percent_Identity=48.0446927374302, Blast_Score=162, Evalue=8e-41, Organism=Drosophila melanogaster, GI24656796, Length=179, Percent_Identity=48.0446927374302, Blast_Score=162, Evalue=2e-40, Organism=Drosophila melanogaster, GI24656791, Length=179, Percent_Identity=48.0446927374302, Blast_Score=161, Evalue=3e-40,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): GCH1_CLOD6 (Q18BW7)
Other databases:
- EMBL: AM180355 - RefSeq: YP_001087950.1 - ProteinModelPortal: Q18BW7 - SMR: Q18BW7 - STRING: Q18BW7 - GeneID: 4915721 - GenomeReviews: AM180355_GR - KEGG: cdf:CD1449 - NMPDR: fig|1496.1.peg.3571 - eggNOG: COG0302 - HOGENOM: HBG370191 - OMA: MYVEEIF - ProtClustDB: PRK09347 - GO: GO:0005737 - HAMAP: MF_00223 - InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 - TIGRFAMs: TIGR00063
Pfam domain/function: PF01227 GTP_cyclohydroI
EC number: =3.5.4.16
Molecular weight: Translated: 21468; Mature: 21468
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKVDKEKIQHAVREILEAIGEDPDREGLIETPNRVARMYEEIFSGLSEEPRDHLKVLFA CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHEEHHC DEKHEELVLVKDIPFYSCCEHHLVPFFGKAHIAYLPKGGRLTGLSKLARVIDTLAKRPQL CCCCCCEEEEECCCHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHH QERITKNAADIIMEELQPYGVLVVVEAEHMCMTMRGVKKPGSKTVTSAVRGIFEKDIASR HHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH AEAMSLITMK HHHHHHHCCC >Mature Secondary Structure MNKVDKEKIQHAVREILEAIGEDPDREGLIETPNRVARMYEEIFSGLSEEPRDHLKVLFA CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHEEHHC DEKHEELVLVKDIPFYSCCEHHLVPFFGKAHIAYLPKGGRLTGLSKLARVIDTLAKRPQL CCCCCCEEEEECCCHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHH QERITKNAADIIMEELQPYGVLVVVEAEHMCMTMRGVKKPGSKTVTSAVRGIFEKDIASR HHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH AEAMSLITMK HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA