| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699020
Identifier: 126699020
GI number: 126699020
Start: 1641497
End: 1642165
Strand: Direct
Name: 126699020
Synonym: CD1417
Alternate gene names: NA
Gene position: 1641497-1642165 (Clockwise)
Preceding gene: 126699019
Following gene: 126699022
Centisome position: 38.26
GC content: 32.44
Gene sequence:
>669_bases ATGAAAGAGGTGTTAAAATTGGCTGATGAAAAATTTGTAATGTCATTTAGTGGTGGTAAGGATAGTATATTAGCATTAAA TCGAATGTTGAAAAAAGGATATAAGCCTGTGGCACTCTTGACAACTATAAGTGAAGAACATGGAAAGTCATGGACACATA ATTTAGAATATAATATGCTTAAGCAAGTAAGTAGCAACATAGGATTACCTTTATTAGTTGCTGAGTGTGGTGTAGAAGGA TATGAAGAGAGCTTTGAGAGGGCTTTAATAAAAGCTAAAAACATGGGAGCAACGATATGTGCATATGGAGATATAGATAT AGAAAGTCATAGAAAATGGGATACTGATAGATGTGAAGCAGTTGGTATGAAAGTAGATTTACCATTATGGCAAGAGAGTA GAGAGGATTTAGTATATGAATTTATAGACAGTGGATTTTGTAGTGTTGTAACAAAAGTAAACTTAAAGCACTTAGGAGAG GAATTTTTAGGAAAAAAATTAACTAGAGAACTTGTGGAGAAGATAAAAAATGCTGGTGCAGACCCATGTGGAGAACATGG AGAGTATCATACATTTGTCGTAGATGGTCCAATATTTAAAAAACCTGTAGAATATGAAGTAAAAGGAACTTTAATAAAAG ATGGCTATGGATATTTAGAAATAAAATAA
Upstream 100 bases:
>100_bases TTTAATATTAGGGGCATTCTTTATAGTGAATTAACAATTTAATATAATTTGCTATGCAACTCAAAAATTTGGTATAATTA TGTTAATAAAACAAAGTTAG
Downstream 100 bases:
>100_bases TTACATAAATAAAATACCTATTATATAATCCTAATTTTTGCAAAGGTTTAATATTTGCAAGATTGTATAATAGGTATTTT TTATTTAGATATTTTCATAT
Product: ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MKEVLKLADEKFVMSFSGGKDSILALNRMLKKGYKPVALLTTISEEHGKSWTHNLEYNMLKQVSSNIGLPLLVAECGVEG YEESFERALIKAKNMGATICAYGDIDIESHRKWDTDRCEAVGMKVDLPLWQESREDLVYEFIDSGFCSVVTKVNLKHLGE EFLGKKLTRELVEKIKNAGADPCGEHGEYHTFVVDGPIFKKPVEYEVKGTLIKDGYGYLEIK
Sequences:
>Translated_222_residues MKEVLKLADEKFVMSFSGGKDSILALNRMLKKGYKPVALLTTISEEHGKSWTHNLEYNMLKQVSSNIGLPLLVAECGVEG YEESFERALIKAKNMGATICAYGDIDIESHRKWDTDRCEAVGMKVDLPLWQESREDLVYEFIDSGFCSVVTKVNLKHLGE EFLGKKLTRELVEKIKNAGADPCGEHGEYHTFVVDGPIFKKPVEYEVKGTLIKDGYGYLEIK >Mature_222_residues MKEVLKLADEKFVMSFSGGKDSILALNRMLKKGYKPVALLTTISEEHGKSWTHNLEYNMLKQVSSNIGLPLLVAECGVEG YEESFERALIKAKNMGATICAYGDIDIESHRKWDTDRCEAVGMKVDLPLWQESREDLVYEFIDSGFCSVVTKVNLKHLGE EFLGKKLTRELVEKIKNAGADPCGEHGEYHTFVVDGPIFKKPVEYEVKGTLIKDGYGYLEIK
Specific function: Unknown
COG id: COG2102
COG function: function code R; Predicted ATPases of PP-loop superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI18087809, Length=223, Percent_Identity=26.9058295964126, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005237 - InterPro: IPR022427 - InterPro: IPR002761 - InterPro: IPR014729 [H]
Pfam domain/function: PF01902 ATP_bind_4 [H]
EC number: NA
Molecular weight: Translated: 25003; Mature: 25003
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEVLKLADEKFVMSFSGGKDSILALNRMLKKGYKPVALLTTISEEHGKSWTHNLEYNML CCHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCCCCCHHHHH KQVSSNIGLPLLVAECGVEGYEESFERALIKAKNMGATICAYGDIDIESHRKWDTDRCEA HHHHHCCCCEEEHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHH VGMKVDLPLWQESREDLVYEFIDSGFCSVVTKVNLKHLGEEFLGKKLTRELVEKIKNAGA CCCEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DPCGEHGEYHTFVVDGPIFKKPVEYEVKGTLIKDGYGYLEIK CCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCEEEEC >Mature Secondary Structure MKEVLKLADEKFVMSFSGGKDSILALNRMLKKGYKPVALLTTISEEHGKSWTHNLEYNML CCHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCCCCCHHHHH KQVSSNIGLPLLVAECGVEGYEESFERALIKAKNMGATICAYGDIDIESHRKWDTDRCEA HHHHHCCCCEEEHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHH VGMKVDLPLWQESREDLVYEFIDSGFCSVVTKVNLKHLGEEFLGKKLTRELVEKIKNAGA CCCEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DPCGEHGEYHTFVVDGPIFKKPVEYEVKGTLIKDGYGYLEIK CCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]