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The map label for this gene is 126699022

Identifier: 126699022

GI number: 126699022

Start: 1643975

End: 1644178

Strand: Direct

Name: 126699022

Synonym: CD1418A

Alternate gene names: NA

Gene position: 1643975-1644178 (Clockwise)

Preceding gene: 126699020

Following gene: 126699023

Centisome position: 38.32

GC content: 24.02

Gene sequence:

>596_bases
AACCCCAATCAAAAAAGTAGTTCAACTTCTAAGTTTTATACAAAGCAGGAAACTCAATTATTATTAGAAAAATCAAAAAA
TATTCCTATAGGTATACCAATTTTTTTGATGCTAACTCTTGGATTACGTTTTGGTGAAGCTGTATCACTTATATGGTCAG
ATGTAGACCTTGATAAAAAATCTCACATGTAAATCAAACATTAGTTTATGTATACAATAAAATAATCTTCAAAGGCCCTA
AAACCCCTAGATTCAAAAGAAGATTATTTGTTCCTGATGAACTTATAAGTTTGTTTAAAGGGGAAAAATTAAAACAAAAT
AAGTTAAAATTACAGGGCATATTGAAAAATGAATTTGATTTGATATGCTTAAATAAAAGATTCAACCCGTGAGTTCAACC
AACTTTTGTTGTTCATTTTAAAAAACTATTAAGAGATAATAATCCTAGAGATATAAAAGTACATGAATTAATACATGCAA
ATGCGACTTTGATATTACTTTCAGGTACTAACATAAAAGCTATTTATAAAATATTAGTACATGCAGATATAAAAATAGCT
ATGAATATATATTCCATATTCTCACTTATTAGATGA

Upstream 100 bases:

>100_bases
GTTATAGCATATAATTCTTACATATTTTACCTATATATTACTTTTCTAAAGATTCGTCTATATATTTCTGTATACATCTA
CTCTATCCTCGATTTGTTAC

Downstream 100 bases:

>100_bases
AATGAATAAAGAAACATCTGAAAATATAAGCAAAATACTATTCAAATAATGTTCAGTTTTATGTCAATTAAATGTCACTC
AAAGTGCTTTTTTTCCATTT

Product: integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>196_residues
NPNQKSSSTSKFYTKQETQLLLEKSKNIPIGIPIFLMLTLGLRFGEAVSLIWSDVDLDKKSHMNQTLVYVYNKIIFKGPK
TPRFKRRLFVPDELISLFKGEKLKQNKLKLQGILKNEFDLICLNKRFNPVQPTFVVHFKKLLRDNNPRDIKVHELIHANA
TLILLSGTNIKAIYKILVHADIKIAMNIYSIFSLIR

Sequences:

>Translated_68_residues
SSNK*EYGIYIHSYFYICMY*YFINSFYVST*K*YQSRICMY*FMYFYISRIIIS**FFKMNNKSWLN
>Mature_68_residues
SSNK*EYGIYIHSYFYICMY*YFINSFYVST*K*YQSRICMY*FMYFYISRIIIS**FFKMNNKSWLN

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7597; Mature: 7597

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
SSNKEYGIYIHSYFYICMYYFINSFYVSTKYQSRICMYFMYFYISRIIISFFKMNNKSWL
CCCCCEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA