| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698955
Identifier: 126698955
GI number: 126698955
Start: 1572524
End: 1572994
Strand: Direct
Name: 126698955
Synonym: CD1356
Alternate gene names: NA
Gene position: 1572524-1572994 (Clockwise)
Preceding gene: 126698954
Following gene: 126698960
Centisome position: 36.65
GC content: 28.24
Gene sequence:
>471_bases TTGAGTAATATTTATAAGTTTTCAGTAACGGTGGGTAGTGTAATGAACATATTATTCTTTCTAACACCAAAAAGTGAAGT AGCATATATATATGAAGACTACACTATAAGGCAAGCCCTAGAAAAAATGGAATATCACAAATACTCTGCAATTCCAATAA TAAGTAAGGATGGTAAATATGTTGGAACTATAACAGAAGGTGATTTTTTATGGACATTAAAAAATGATTTAAATCTGGAC TTAAAGGGATTGGAAGATGTTCCAGTGACAGATATAAATAGAAAAATGGATAATTCTCCTGTTTCCATCAACGCAGATAT TGAAGATTTAGTTATAAAATCTTTAAATCAAAATTTCATTCCTGTTATAGATGACCAAGACACATTTATTGGGATAATAA AAAGAAGAGATGTAATAGGTTACTGTTATGAGATAATACGTGGATATAAAAATTTAGCTAATGATAATTAA
Upstream 100 bases:
>100_bases AAATGAGCAAAGGAAAAACGCTTGTTACAGCGTATAGTATTAAGAATACTTAGAAAATAAGAAAGGAGAAAGTTACTGCA AAAAAGTAACATTATAAATA
Downstream 100 bases:
>100_bases AAATCTTATTTAAACTTTTAAGCTGAGTTCTTTACAATAAAAGAATGATAATATGAAACTGAATATTTAAACTTTAATAT AAAAAGCTGTCTTTTCTAAT
Product: regulatory protein
Products: NA
Alternate protein names: CBS Domain Containing Membrane Protein; CBS Domain Containing Protein; CBS Domain Protein; CBS Domain Pair; Two CBS Domain-Containing Protein; CBS Domain Pair Protein; Inosine-5-Monophosphate Dehydrogenase; Regulatory Protein; Cbs Domain Protein
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MSNIYKFSVTVGSVMNILFFLTPKSEVAYIYEDYTIRQALEKMEYHKYSAIPIISKDGKYVGTITEGDFLWTLKNDLNLD LKGLEDVPVTDINRKMDNSPVSINADIEDLVIKSLNQNFIPVIDDQDTFIGIIKRRDVIGYCYEIIRGYKNLANDN
Sequences:
>Translated_156_residues MSNIYKFSVTVGSVMNILFFLTPKSEVAYIYEDYTIRQALEKMEYHKYSAIPIISKDGKYVGTITEGDFLWTLKNDLNLD LKGLEDVPVTDINRKMDNSPVSINADIEDLVIKSLNQNFIPVIDDQDTFIGIIKRRDVIGYCYEIIRGYKNLANDN >Mature_155_residues SNIYKFSVTVGSVMNILFFLTPKSEVAYIYEDYTIRQALEKMEYHKYSAIPIISKDGKYVGTITEGDFLWTLKNDLNLDL KGLEDVPVTDINRKMDNSPVSINADIEDLVIKSLNQNFIPVIDDQDTFIGIIKRRDVIGYCYEIIRGYKNLANDN
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17918; Mature: 17787
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIYKFSVTVGSVMNILFFLTPKSEVAYIYEDYTIRQALEKMEYHKYSAIPIISKDGKY CCCEEEEEEEHHHHHHHHEEECCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEECCCCE VGTITEGDFLWTLKNDLNLDLKGLEDVPVTDINRKMDNSPVSINADIEDLVIKSLNQNFI EEEEECCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCC PVIDDQDTFIGIIKRRDVIGYCYEIIRGYKNLANDN EEECCCCCEEEEEHHCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SNIYKFSVTVGSVMNILFFLTPKSEVAYIYEDYTIRQALEKMEYHKYSAIPIISKDGKY CCEEEEEEEHHHHHHHHEEECCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEECCCCE VGTITEGDFLWTLKNDLNLDLKGLEDVPVTDINRKMDNSPVSINADIEDLVIKSLNQNFI EEEEECCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCC PVIDDQDTFIGIIKRRDVIGYCYEIIRGYKNLANDN EEECCCCCEEEEEHHCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA