The gene/protein map for NC_009089 is currently unavailable.
Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698949

Identifier: 126698949

GI number: 126698949

Start: 1566461

End: 1567177

Strand: Direct

Name: 126698949

Synonym: CD1350

Alternate gene names: NA

Gene position: 1566461-1567177 (Clockwise)

Preceding gene: 126698948

Following gene: 126698950

Centisome position: 36.51

GC content: 30.54

Gene sequence:

>717_bases
ATGGAAAGATTTATTAGAGTGGAATTTCAAAAGATGAAAGGAACTTTTGGAATGAAGTTGATATGGATAGTTCCAGTGTT
TTGTATACTTTTGTGTGGACTAGGTGGAGGGCAAAATGCTGCTTTCAACTGGTGGTATACGACATTTCTTCCAGGAGCAT
TAACATTAATATCTTCTTTAATAGTATTAAAAGATGAAAAAAGTAAATATCGTGGTATTTTACCCTTGCCAATTGAAATG
AAAGACGTTTGGACTGGAAAAATGATTTACTGTATTATTTGTTGTTTTATAGCATCAATTATTTCTGCAATAGGTGTAGT
TTTTGTTGGGATAATCTATAAAGAAACTATTTCAATAGGTCAAAATATCATTGCAACTATATTAATTATTTTACTATTTA
TGTGGCAGATTCCTCTTTGTATGTTTTTAGCTTCAAAATTTGGTATATTTGTTACAGTTCTAATAAATATGTTCTTCACT
ATTGTTGGAGTTGCTGTTTTCTCAACTACAGAAATGTGGTATATGTTTCCATATTCGATTCCTTCAAGATTAATGGCTGT
TGTATTGCATATTCTGCCAAATGGTCTTCCTGTACCAGAGGGAAGTGAATTTTTAAATAATGCTGTTATTTTGCCAGGAG
TATTAATATCTATTGTTTTATTTGTATTATTTGCTTTAGCTACAAGGGTTTGGTTCAATAATAGAGAGGTGAAGTAA

Upstream 100 bases:

>100_bases
AATGGAGTAATGGGTTATCAAGGAGAAGTATCAAAAGAACAAAACTTAGAAAAACTTTTTATGAAAGTTGTAGCTGAAAA
TAGAAAGAGAGGGGAGTAAT

Downstream 100 bases:

>100_bases
TATGAGACAGTTAATAAGAATATTTTGTTCTGATTTAATAAAATTAAAGAGAAATTTTATAATACTAATGCACATTTGCA
TTGCTTTAATGGGGATGGGA

Product: lantibiotic ABC transporter permease

Products: NA

Alternate protein names: Bacteriocin ABC Transporter Permease Protein Subunit; Permease; Lantibiotic ABC Transporter Permease; Lantibiotic ABC Transporter Permease Protein; Transporter Protein; Bacteriocin ABC Transporter Permease Subunit; Bacteriocin Abc Transporter Permease Subunit; Antibiotic ABC Transporter; Lantibiotic PermeaE/MutE; Mutacin ABC Transporter Protein MutE; Subtilin ABC Transporter Permease; Antibiotic Permease Protein SpaE/MutE

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MERFIRVEFQKMKGTFGMKLIWIVPVFCILLCGLGGGQNAAFNWWYTTFLPGALTLISSLIVLKDEKSKYRGILPLPIEM
KDVWTGKMIYCIICCFIASIISAIGVVFVGIIYKETISIGQNIIATILIILLFMWQIPLCMFLASKFGIFVTVLINMFFT
IVGVAVFSTTEMWYMFPYSIPSRLMAVVLHILPNGLPVPEGSEFLNNAVILPGVLISIVLFVLFALATRVWFNNREVK

Sequences:

>Translated_238_residues
MERFIRVEFQKMKGTFGMKLIWIVPVFCILLCGLGGGQNAAFNWWYTTFLPGALTLISSLIVLKDEKSKYRGILPLPIEM
KDVWTGKMIYCIICCFIASIISAIGVVFVGIIYKETISIGQNIIATILIILLFMWQIPLCMFLASKFGIFVTVLINMFFT
IVGVAVFSTTEMWYMFPYSIPSRLMAVVLHILPNGLPVPEGSEFLNNAVILPGVLISIVLFVLFALATRVWFNNREVK
>Mature_238_residues
MERFIRVEFQKMKGTFGMKLIWIVPVFCILLCGLGGGQNAAFNWWYTTFLPGALTLISSLIVLKDEKSKYRGILPLPIEM
KDVWTGKMIYCIICCFIASIISAIGVVFVGIIYKETISIGQNIIATILIILLFMWQIPLCMFLASKFGIFVTVLINMFFT
IVGVAVFSTTEMWYMFPYSIPSRLMAVVLHILPNGLPVPEGSEFLNNAVILPGVLISIVLFVLFALATRVWFNNREVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26842; Mature: 26842

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERFIRVEFQKMKGTFGMKLIWIVPVFCILLCGLGGGQNAAFNWWYTTFLPGALTLISSL
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
IVLKDEKSKYRGILPLPIEMKDVWTGKMIYCIICCFIASIISAIGVVFVGIIYKETISIG
HHHCCCHHHHCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNIIATILIILLFMWQIPLCMFLASKFGIFVTVLINMFFTIVGVAVFSTTEMWYMFPYSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCH
PSRLMAVVLHILPNGLPVPEGSEFLNNAVILPGVLISIVLFVLFALATRVWFNNREVK
HHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MERFIRVEFQKMKGTFGMKLIWIVPVFCILLCGLGGGQNAAFNWWYTTFLPGALTLISSL
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
IVLKDEKSKYRGILPLPIEMKDVWTGKMIYCIICCFIASIISAIGVVFVGIIYKETISIG
HHHCCCHHHHCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNIIATILIILLFMWQIPLCMFLASKFGIFVTVLINMFFTIVGVAVFSTTEMWYMFPYSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCH
PSRLMAVVLHILPNGLPVPEGSEFLNNAVILPGVLISIVLFVLFALATRVWFNNREVK
HHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA