Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698950

Identifier: 126698950

GI number: 126698950

Start: 1567179

End: 1567937

Strand: Direct

Name: 126698950

Synonym: CD1351

Alternate gene names: NA

Gene position: 1567179-1567937 (Clockwise)

Preceding gene: 126698949

Following gene: 126698951

Centisome position: 36.53

GC content: 27.27

Gene sequence:

>759_bases
ATGAGACAGTTAATAAGAATATTTTGTTCTGATTTAATAAAATTAAAGAGAAATTTTATAATACTAATGCACATTTGCAT
TGCTTTAATGGGGATGGGATTGTTTTTATGGTATTATAAGGTTTCAGGAGCTGATAATATACTAAAGATAGTAGGATATT
TACAAGTTATAGCAATAGCTTTTCCTTTATTGTCAGGTGTTGTGTGTTCAATGTTTGTTGAACAAGAATATTATGCAGGG
AATTATAAACATATGTTAACAACATCTAATCCAAAATATCTTACTCTTATAAGTAAATATATAATCTTAGTATGTCTTGG
TTTTGTAGCAACATTAGTGTCTGTATTAGGTTTTAAATTTGGTATATCTAAGGCTTACTTTACATCAAGCTTTTATATGA
TTTCAATTCTAATTTTAATTGCGTGTAATTTATTTGAATACATATTACATTTATTCTTAAGTTTAAGGTTCGGAAAAGGA
ACATCAATTGGAGTAGGTATAGTTGAAATGTTACTTTCAGCATTATTATTAACTGGATTGGGTTCTGGTATTTGGCAGTA
TTTTCCTTGTGCATGGGGTGTTAGATTTATAACTATTTGGTCGTCTTTTTCAAGTTCTAAAACGGTTGAATATATAAAGG
TTGAATCAATAAAATCATATCAATCAACAGGTTTAATTTGTGGTTTTGTAACAATTTTAGCATTTGTAATTTTATGTATT
TGGTTTTCTAAATGGGAAGGTAAAAAATCAGAAGAATAG

Upstream 100 bases:

>100_bases
AATGCTGTTATTTTGCCAGGAGTATTAATATCTATTGTTTTATTTGTATTATTTGCTTTAGCTACAAGGGTTTGGTTCAA
TAATAGAGAGGTGAAGTAAT

Downstream 100 bases:

>100_bases
AGTAAAAATTGACTGTTTATTTATATTATTATGTTAAAATATAACTTAGCAATAAAAAGATATAAAATAATCAAATAAAA
AACTGGTTGGGTATTAATTA

Product: lantibiotic ABC transporter permease

Products: NA

Alternate protein names: Permease; Lantibiotic ABC Transporter Permease; Lantibiotic Transport-Associated PermeaG/MutG; Lantibiotic ABC Transporter; Bacteriocin ABC Transporter; Bacteriocin ABC Transporter Permease Protein Subunit; Transporter Protein; Bacteriocin ABC Transporter Permease Subunit; Lantibiotic ABC Transporter Permease Protein; Bacteriocin Abc Transporter; Antibiotic ABC Transporter; Antibiotic ABC Transporter Protein MutG; Subtilin ABC Transporter Permease

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MRQLIRIFCSDLIKLKRNFIILMHICIALMGMGLFLWYYKVSGADNILKIVGYLQVIAIAFPLLSGVVCSMFVEQEYYAG
NYKHMLTTSNPKYLTLISKYIILVCLGFVATLVSVLGFKFGISKAYFTSSFYMISILILIACNLFEYILHLFLSLRFGKG
TSIGVGIVEMLLSALLLTGLGSGIWQYFPCAWGVRFITIWSSFSSSKTVEYIKVESIKSYQSTGLICGFVTILAFVILCI
WFSKWEGKKSEE

Sequences:

>Translated_252_residues
MRQLIRIFCSDLIKLKRNFIILMHICIALMGMGLFLWYYKVSGADNILKIVGYLQVIAIAFPLLSGVVCSMFVEQEYYAG
NYKHMLTTSNPKYLTLISKYIILVCLGFVATLVSVLGFKFGISKAYFTSSFYMISILILIACNLFEYILHLFLSLRFGKG
TSIGVGIVEMLLSALLLTGLGSGIWQYFPCAWGVRFITIWSSFSSSKTVEYIKVESIKSYQSTGLICGFVTILAFVILCI
WFSKWEGKKSEE
>Mature_252_residues
MRQLIRIFCSDLIKLKRNFIILMHICIALMGMGLFLWYYKVSGADNILKIVGYLQVIAIAFPLLSGVVCSMFVEQEYYAG
NYKHMLTTSNPKYLTLISKYIILVCLGFVATLVSVLGFKFGISKAYFTSSFYMISILILIACNLFEYILHLFLSLRFGKG
TSIGVGIVEMLLSALLLTGLGSGIWQYFPCAWGVRFITIWSSFSSSKTVEYIKVESIKSYQSTGLICGFVTILAFVILCI
WFSKWEGKKSEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28482; Mature: 28482

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCCCCCCC
>Mature Secondary Structure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HHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA