| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
Click here to switch to the map view.
The map label for this gene is malX [H]
Identifier: 126698935
GI number: 126698935
Start: 1550494
End: 1552071
Strand: Direct
Name: malX [H]
Synonym: CD1336
Alternate gene names: 126698935
Gene position: 1550494-1552071 (Clockwise)
Preceding gene: 126698934
Following gene: 126698936
Centisome position: 36.14
GC content: 30.1
Gene sequence:
>1578_bases ATGAAACAAAAAATGAAAGAATTCTTTTTACAGTTAGGAAAATCATTTTTATTGCCAATAGCATTAATATCTGCAGCAGG TATATTTTTAGGAATAAGTTCAGCATTTTCAAATCCTAATATAGTTAGTGATATGCCTTTTTTAGCAAATAATTTTATTC AAGGAATATTGGGTTTTACAAAAGCTATAACAGGAGTACTTTTTGGAAACTTAGCAATATTCTTTGCTATATCAATATCT GTTGGTCTTGCTAAAGAAGAAAAAGCAGTTTCTGCATTTTCTGGTTTTGTTGGTTATTTAGTATTACACACTAGTATAAA TTATATGTTAGGGTGTAGGGGGATTCTTGCTGAACCTGACATGATGAGAGAAATGGGTCAAGCTGTAACTTTAGGCATAC AAACATTAGAATTAGGAGTATTTGGTGGAATTGTAGTTGGTATAATAACAGCATCATTACATAATAAATACTATAATATA AAACTGCCAGATTATTTAGGATTCTTTGGTGGAACTAGGTTTGTTCCAATAATAACAACAGTAGTATTCTCTATTTTGGG GATAATAATACCATATATATGGCCATATGTAAATACAATTATTCAGAGTGTAGGTATTGGTATAGCTAGTTTAGGATATT TAGGAACATTTGTATTTGGGTTTCTTGAAAGACTTTTAATACCATTTGGATTACATCATATATTAAATGCTATGTTTAGA TTTACTGAAGTAGGAGGTTCTTTAGTTGTGGGAGGGCAAGAAGTATTTGGAGCATTAAACATATTCTTAGCTCAACTAAG TGACCCTGAAACAATCAGTTTTTCAACAGAAGCAACTAGATTTTTAGCTCAAGGGAAAATACCTATAATGGTATTTGGTC TTCCTGCTGCTGCATATGCCATGTATAAAACTGCAAAGCCTGAAAATAGGTCGAAGGTTAAAGGTATATTACTAGCTGGT GCTTTAGCAACATTTGTAACAGGAATTACGGAACCATTGGAATTTTCATTCTTATTTGTATCACCAATATTATTTGTTAT ACATGCATTTTTATCAGGTATATCATTTATGATGATGCATATATTTGGAGTAGCAATAGGAAATACTCAAGGTGGCATAA TAGATTTAGTAGTATTTGGAGTTATGCAACCAAATACAAAGTGGATTTATTCTATAATACTTGGTTTGGTGTATGCAATA GTTTATTATAATGTATTTAAGATTTTGATACTTAGATTTAACTTACAAACTCCAGGACGAGAAGAAATAACAGATATAAA TTTTGATTTAGAACCTTTATCAAATAAAGTAGAAATAGCTCAAAGTGGAGAAACTACTAAGAGAGCATTATCTATAATTA AATATTTAGGTGGTAAGGACAATATAGAAGATATAACAAACTGTATAACTCGCTTAAGAGTAGTAGTTAAAGATATGAGT AAAGTAGATGAAAATGCTTTTAAAAAATATACAGGTGCAATGGGAGTTATAAAAGTATCTGATAAAGATATCCAAATAAT TTATGGGCCATCTGTATCTCAAGTAAGAGACGAAGTTTCTTTTGCAATGTCTATTTAA
Upstream 100 bases:
>100_bases AAAATATTTTAAAACAAATTATAAAGTTTCAAAAACAAAATAAAAATATATAATTATGACATAGAAAACGTTTTAAAAAT TTAAAAATGGAGGGATAGAA
Downstream 100 bases:
>100_bases AGTAAATATTAAAAGGCAATACTAATTTATAATTTGTATTGTCTTTTTTGTAGTATAATAAACATAAGATAAATGCTGTA TAGTGTATATTTATATAATA
Product: PTS system maltose and glucose-specific transporter subunit IIBC
Products: NA
Alternate protein names: Maltose and glucose permease IIC component; PTS system maltose- and glucose-specific EIIC component; Maltose- and glucose-specific phosphotransferase enzyme IIB component; PTS system maltose- and glucose-specific EIIB component [H]
Number of amino acids: Translated: 525; Mature: 525
Protein sequence:
>525_residues MKQKMKEFFLQLGKSFLLPIALISAAGIFLGISSAFSNPNIVSDMPFLANNFIQGILGFTKAITGVLFGNLAIFFAISIS VGLAKEEKAVSAFSGFVGYLVLHTSINYMLGCRGILAEPDMMREMGQAVTLGIQTLELGVFGGIVVGIITASLHNKYYNI KLPDYLGFFGGTRFVPIITTVVFSILGIIIPYIWPYVNTIIQSVGIGIASLGYLGTFVFGFLERLLIPFGLHHILNAMFR FTEVGGSLVVGGQEVFGALNIFLAQLSDPETISFSTEATRFLAQGKIPIMVFGLPAAAYAMYKTAKPENRSKVKGILLAG ALATFVTGITEPLEFSFLFVSPILFVIHAFLSGISFMMMHIFGVAIGNTQGGIIDLVVFGVMQPNTKWIYSIILGLVYAI VYYNVFKILILRFNLQTPGREEITDINFDLEPLSNKVEIAQSGETTKRALSIIKYLGGKDNIEDITNCITRLRVVVKDMS KVDENAFKKYTGAMGVIKVSDKDIQIIYGPSVSQVRDEVSFAMSI
Sequences:
>Translated_525_residues MKQKMKEFFLQLGKSFLLPIALISAAGIFLGISSAFSNPNIVSDMPFLANNFIQGILGFTKAITGVLFGNLAIFFAISIS VGLAKEEKAVSAFSGFVGYLVLHTSINYMLGCRGILAEPDMMREMGQAVTLGIQTLELGVFGGIVVGIITASLHNKYYNI KLPDYLGFFGGTRFVPIITTVVFSILGIIIPYIWPYVNTIIQSVGIGIASLGYLGTFVFGFLERLLIPFGLHHILNAMFR FTEVGGSLVVGGQEVFGALNIFLAQLSDPETISFSTEATRFLAQGKIPIMVFGLPAAAYAMYKTAKPENRSKVKGILLAG ALATFVTGITEPLEFSFLFVSPILFVIHAFLSGISFMMMHIFGVAIGNTQGGIIDLVVFGVMQPNTKWIYSIILGLVYAI VYYNVFKILILRFNLQTPGREEITDINFDLEPLSNKVEIAQSGETTKRALSIIKYLGGKDNIEDITNCITRLRVVVKDMS KVDENAFKKYTGAMGVIKVSDKDIQIIYGPSVSQVRDEVSFAMSI >Mature_525_residues MKQKMKEFFLQLGKSFLLPIALISAAGIFLGISSAFSNPNIVSDMPFLANNFIQGILGFTKAITGVLFGNLAIFFAISIS VGLAKEEKAVSAFSGFVGYLVLHTSINYMLGCRGILAEPDMMREMGQAVTLGIQTLELGVFGGIVVGIITASLHNKYYNI KLPDYLGFFGGTRFVPIITTVVFSILGIIIPYIWPYVNTIIQSVGIGIASLGYLGTFVFGFLERLLIPFGLHHILNAMFR FTEVGGSLVVGGQEVFGALNIFLAQLSDPETISFSTEATRFLAQGKIPIMVFGLPAAAYAMYKTAKPENRSKVKGILLAG ALATFVTGITEPLEFSFLFVSPILFVIHAFLSGISFMMMHIFGVAIGNTQGGIIDLVVFGVMQPNTKWIYSIILGLVYAI VYYNVFKILILRFNLQTPGREEITDINFDLEPLSNKVEIAQSGETTKRALSIIKYLGGKDNIEDITNCITRLRVVVKDMS KVDENAFKKYTGAMGVIKVSDKDIQIIYGPSVSQVRDEVSFAMSI
Specific function: MalX encodes a phosphotransferase system enzyme II that can recognize glucose and maltose as substrates even though these sugars may not represent the natural substrates of the system [H]
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787908, Length=522, Percent_Identity=46.551724137931, Blast_Score=476, Evalue=1e-135, Organism=Escherichia coli, GI1787343, Length=514, Percent_Identity=36.7704280155642, Blast_Score=298, Evalue=6e-82, Organism=Escherichia coli, GI1786894, Length=512, Percent_Identity=34.765625, Blast_Score=253, Evalue=2e-68, Organism=Escherichia coli, GI48994906, Length=71, Percent_Identity=46.4788732394366, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018113 - InterPro: IPR004719 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR011301 [H]
Pfam domain/function: PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 57339; Mature: 57339
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQKMKEFFLQLGKSFLLPIALISAAGIFLGISSAFSNPNIVSDMPFLANNFIQGILGFT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH KAITGVLFGNLAIFFAISISVGLAKEEKAVSAFSGFVGYLVLHTSINYMLGCRGILAEPD HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH MMREMGQAVTLGIQTLELGVFGGIVVGIITASLHNKYYNIKLPDYLGFFGGTRFVPIITT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCHHHHHHHH VVFSILGIIIPYIWPYVNTIIQSVGIGIASLGYLGTFVFGFLERLLIPFGLHHILNAMFR HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTEVGGSLVVGGQEVFGALNIFLAQLSDPETISFSTEATRFLAQGKIPIMVFGLPAAAYA HHHCCCCEEECHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHCCCCCEEEEECCHHHHH MYKTAKPENRSKVKGILLAGALATFVTGITEPLEFSFLFVSPILFVIHAFLSGISFMMMH HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFGVAIGNTQGGIIDLVVFGVMQPNTKWIYSIILGLVYAIVYYNVFKILILRFNLQTPGR HHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC EEITDINFDLEPLSNKVEIAQSGETTKRALSIIKYLGGKDNIEDITNCITRLRVVVKDMS CCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH KVDENAFKKYTGAMGVIKVSDKDIQIIYGPSVSQVRDEVSFAMSI HHHHHHHHHHHCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHCC >Mature Secondary Structure MKQKMKEFFLQLGKSFLLPIALISAAGIFLGISSAFSNPNIVSDMPFLANNFIQGILGFT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH KAITGVLFGNLAIFFAISISVGLAKEEKAVSAFSGFVGYLVLHTSINYMLGCRGILAEPD HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH MMREMGQAVTLGIQTLELGVFGGIVVGIITASLHNKYYNIKLPDYLGFFGGTRFVPIITT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCHHHHHHHH VVFSILGIIIPYIWPYVNTIIQSVGIGIASLGYLGTFVFGFLERLLIPFGLHHILNAMFR HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTEVGGSLVVGGQEVFGALNIFLAQLSDPETISFSTEATRFLAQGKIPIMVFGLPAAAYA HHHCCCCEEECHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHCCCCCEEEEECCHHHHH MYKTAKPENRSKVKGILLAGALATFVTGITEPLEFSFLFVSPILFVIHAFLSGISFMMMH HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFGVAIGNTQGGIIDLVVFGVMQPNTKWIYSIILGLVYAIVYYNVFKILILRFNLQTPGR HHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC EEITDINFDLEPLSNKVEIAQSGETTKRALSIIKYLGGKDNIEDITNCITRLRVVVKDMS CCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH KVDENAFKKYTGAMGVIKVSDKDIQIIYGPSVSQVRDEVSFAMSI HHHHHHHHHHHCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1856179; 9097039; 9278503; 2670898 [H]