| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
Click here to switch to the map view.
The map label for this gene is marR [C]
Identifier: 126698934
GI number: 126698934
Start: 1549630
End: 1550082
Strand: Direct
Name: marR [C]
Synonym: CD1335
Alternate gene names: 126698934
Gene position: 1549630-1550082 (Clockwise)
Preceding gene: 126698933
Following gene: 126698935
Centisome position: 36.12
GC content: 25.17
Gene sequence:
>453_bases ATGAACTATATAGTAAAAGATACCATAAGTTTTTTAGTAAAAACATTTCCTAAGATTTATTCTAGCCTGTACTTAGAAGA CCTAAAAAAATTTGCACCAGATTATAATGTAAATAAAACACAATTAAGAGCATTAGTTTTCATAAAAAATTATGGAGTAA TAAGTATGACTGATTTATGCTCTAAGTTAAATATAGAAAAAGGCAGTTTAACTAGTATGGTTGATGATTTAACTGATAAG AAGTATGTAACAAGGAAAAGAGATTTAGTTGATAGAAGAAAATATCTAATTGACATTACTGAAGAGGGAGATAAGATAGC AACTGATTTTATGGATAAATTAAGTGATGGTTTAGGAGAAAAACTTTCTAAATTAACTGAAGAAGACAGAAAAAAATATT TAGAAGCAATAAATACTCTTCAATATATATTAAACAAAGAAGAATTTAGATAG
Upstream 100 bases:
>100_bases ACATTCAGCAAAAACTATTGTACTTGCAATATTTTTAATGTAAACTGAAATAAAGTTATTTAGATAATTTAATAAATTTT AAAACAACCGAGGTGATTAT
Downstream 100 bases:
>100_bases AAAAAATATAAAAATTTTTGTATTTAATGGTACTAAGATTAATTCTTTGTTATTCATTTAACTATATAATTATAAGTCTA AATACAATCTAAAAAGTACA
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Multidrug Resistance Operon Repressor
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MNYIVKDTISFLVKTFPKIYSSLYLEDLKKFAPDYNVNKTQLRALVFIKNYGVISMTDLCSKLNIEKGSLTSMVDDLTDK KYVTRKRDLVDRRKYLIDITEEGDKIATDFMDKLSDGLGEKLSKLTEEDRKKYLEAINTLQYILNKEEFR
Sequences:
>Translated_150_residues MNYIVKDTISFLVKTFPKIYSSLYLEDLKKFAPDYNVNKTQLRALVFIKNYGVISMTDLCSKLNIEKGSLTSMVDDLTDK KYVTRKRDLVDRRKYLIDITEEGDKIATDFMDKLSDGLGEKLSKLTEEDRKKYLEAINTLQYILNKEEFR >Mature_150_residues MNYIVKDTISFLVKTFPKIYSSLYLEDLKKFAPDYNVNKTQLRALVFIKNYGVISMTDLCSKLNIEKGSLTSMVDDLTDK KYVTRKRDLVDRRKYLIDITEEGDKIATDFMDKLSDGLGEKLSKLTEEDRKKYLEAINTLQYILNKEEFR
Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17575; Mature: 17575
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYIVKDTISFLVKTFPKIYSSLYLEDLKKFAPDYNVNKTQLRALVFIKNYGVISMTDLC CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHH SKLNIEKGSLTSMVDDLTDKKYVTRKRDLVDRRKYLIDITEEGDKIATDFMDKLSDGLGE HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH KLSKLTEEDRKKYLEAINTLQYILNKEEFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNYIVKDTISFLVKTFPKIYSSLYLEDLKKFAPDYNVNKTQLRALVFIKNYGVISMTDLC CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHH SKLNIEKGSLTSMVDDLTDKKYVTRKRDLVDRRKYLIDITEEGDKIATDFMDKLSDGLGE HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH KLSKLTEEDRKKYLEAINTLQYILNKEEFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA