Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is marR [C]

Identifier: 126698934

GI number: 126698934

Start: 1549630

End: 1550082

Strand: Direct

Name: marR [C]

Synonym: CD1335

Alternate gene names: 126698934

Gene position: 1549630-1550082 (Clockwise)

Preceding gene: 126698933

Following gene: 126698935

Centisome position: 36.12

GC content: 25.17

Gene sequence:

>453_bases
ATGAACTATATAGTAAAAGATACCATAAGTTTTTTAGTAAAAACATTTCCTAAGATTTATTCTAGCCTGTACTTAGAAGA
CCTAAAAAAATTTGCACCAGATTATAATGTAAATAAAACACAATTAAGAGCATTAGTTTTCATAAAAAATTATGGAGTAA
TAAGTATGACTGATTTATGCTCTAAGTTAAATATAGAAAAAGGCAGTTTAACTAGTATGGTTGATGATTTAACTGATAAG
AAGTATGTAACAAGGAAAAGAGATTTAGTTGATAGAAGAAAATATCTAATTGACATTACTGAAGAGGGAGATAAGATAGC
AACTGATTTTATGGATAAATTAAGTGATGGTTTAGGAGAAAAACTTTCTAAATTAACTGAAGAAGACAGAAAAAAATATT
TAGAAGCAATAAATACTCTTCAATATATATTAAACAAAGAAGAATTTAGATAG

Upstream 100 bases:

>100_bases
ACATTCAGCAAAAACTATTGTACTTGCAATATTTTTAATGTAAACTGAAATAAAGTTATTTAGATAATTTAATAAATTTT
AAAACAACCGAGGTGATTAT

Downstream 100 bases:

>100_bases
AAAAAATATAAAAATTTTTGTATTTAATGGTACTAAGATTAATTCTTTGTTATTCATTTAACTATATAATTATAAGTCTA
AATACAATCTAAAAAGTACA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Multidrug Resistance Operon Repressor

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MNYIVKDTISFLVKTFPKIYSSLYLEDLKKFAPDYNVNKTQLRALVFIKNYGVISMTDLCSKLNIEKGSLTSMVDDLTDK
KYVTRKRDLVDRRKYLIDITEEGDKIATDFMDKLSDGLGEKLSKLTEEDRKKYLEAINTLQYILNKEEFR

Sequences:

>Translated_150_residues
MNYIVKDTISFLVKTFPKIYSSLYLEDLKKFAPDYNVNKTQLRALVFIKNYGVISMTDLCSKLNIEKGSLTSMVDDLTDK
KYVTRKRDLVDRRKYLIDITEEGDKIATDFMDKLSDGLGEKLSKLTEEDRKKYLEAINTLQYILNKEEFR
>Mature_150_residues
MNYIVKDTISFLVKTFPKIYSSLYLEDLKKFAPDYNVNKTQLRALVFIKNYGVISMTDLCSKLNIEKGSLTSMVDDLTDK
KYVTRKRDLVDRRKYLIDITEEGDKIATDFMDKLSDGLGEKLSKLTEEDRKKYLEAINTLQYILNKEEFR

Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17575; Mature: 17575

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYIVKDTISFLVKTFPKIYSSLYLEDLKKFAPDYNVNKTQLRALVFIKNYGVISMTDLC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
SKLNIEKGSLTSMVDDLTDKKYVTRKRDLVDRRKYLIDITEEGDKIATDFMDKLSDGLGE
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
KLSKLTEEDRKKYLEAINTLQYILNKEEFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNYIVKDTISFLVKTFPKIYSSLYLEDLKKFAPDYNVNKTQLRALVFIKNYGVISMTDLC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
SKLNIEKGSLTSMVDDLTDKKYVTRKRDLVDRRKYLIDITEEGDKIATDFMDKLSDGLGE
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
KLSKLTEEDRKKYLEAINTLQYILNKEEFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA