| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
Click here to switch to the map view.
The map label for this gene is ymxH [H]
Identifier: 126698920
GI number: 126698920
Start: 1531845
End: 1532090
Strand: Direct
Name: ymxH [H]
Synonym: CD1321
Alternate gene names: 126698920
Gene position: 1531845-1532090 (Clockwise)
Preceding gene: 126698919
Following gene: 126698921
Centisome position: 35.71
GC content: 32.11
Gene sequence:
>246_bases ATGAATTTATCTGAAATAGCAGGTAAGGAAATAGTTAACTTGGTCACAGGAGAAAGATTGGGGGTCATTGGAGAATGTGA CCTTATACTAGATGAAACTACAGGCGGTATATTAGCGCTTCTAATTCCAAAAGAAAAAGGATTTTTTGCCAGAAGAAAAG ATAAGTCATTTTTAGAAGTACCATGGAGAAATGTAAAAAAAATAGGTAATGACATGATAATTATAGAATATGAGGGATAT ATTTAG
Upstream 100 bases:
>100_bases AATATCGAAAATATTGGTACATGTATAGTTGGAAGAGATGTAGAAAAGATTCTACACTTGGATTAATATTGAAAAAAGTA AATCTCTGGAGGTATAAAAT
Downstream 100 bases:
>100_bases GAGGAAAAAATGAGTATTTTAGTGCAAAAGTTTGGTGGGACATCAGTAGAATCATATGAAAAAATGAATGAAGTATGTAA GATAGTAAAAGCATACAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: ORFZ [H]
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MNLSEIAGKEIVNLVTGERLGVIGECDLILDETTGGILALLIPKEKGFFARRKDKSFLEVPWRNVKKIGNDMIIIEYEGY I
Sequences:
>Translated_81_residues MNLSEIAGKEIVNLVTGERLGVIGECDLILDETTGGILALLIPKEKGFFARRKDKSFLEVPWRNVKKIGNDMIIIEYEGY I >Mature_81_residues MNLSEIAGKEIVNLVTGERLGVIGECDLILDETTGGILALLIPKEKGFFARRKDKSFLEVPWRNVKKIGNDMIIIEYEGY I
Specific function: Unknown
COG id: COG1873
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ylmC/ymxH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007903 - InterPro: IPR011033 - InterPro: IPR014238 [H]
Pfam domain/function: PF05239 PRC [H]
EC number: NA
Molecular weight: Translated: 9096; Mature: 9096
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSEIAGKEIVNLVTGERLGVIGECDLILDETTGGILALLIPKEKGFFARRKDKSFLEV CCHHHHHHHHHHHHHCCCCCCEEECCEEEEECCCCCEEEEEEECCCCCEEECCCCCEEEC PWRNVKKIGNDMIIIEYEGYI CCHHHHHCCCCEEEEEECCCC >Mature Secondary Structure MNLSEIAGKEIVNLVTGERLGVIGECDLILDETTGGILALLIPKEKGFFARRKDKSFLEV CCHHHHHHHHHHHHHCCCCCCEEECCEEEEECCCCCEEEEEEECCCCCEEECCCCCEEEC PWRNVKKIGNDMIIIEYEGYI CCHHHHHCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8098035; 9384377 [H]