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The map label for this gene is tlpB [C]

Identifier: 126698911

GI number: 126698911

Start: 1522193

End: 1523311

Strand: Direct

Name: tlpB [C]

Synonym: CD1312

Alternate gene names: 126698911

Gene position: 1522193-1523311 (Clockwise)

Preceding gene: 126698910

Following gene: 126698912

Centisome position: 35.48

GC content: 26.09

Gene sequence:

>1119_bases
GTGATAGCAGTGAAAAAAGCCTATAAGTTTAGAATGTATCCAAATAAAAAACAACAAGAGTTAATTAACAAAACTTTTGG
ATGTTGTAGATTTGTATATAATAAATATCTTGCTAAAAGAATAGATGTTTATAAAAGCGATAAAGAAACTTTTACTTATA
AACAGTGTAGTTCTGATTTGACCAATTTAAAAAAAGAATTAAAATGGCTTAAGGAACCTGACAAATTTTCACTACAAAAC
GCCTTAAAAGATTTAGATAATGCATATAAAAAATTCTTTAAAGAAAAGGCAGGATTTCCTAAATTTAAATCAAAGAAAAT
TAATAGATTTTCATATAAAACTAACTTTACAAATGGAAACATTATGTATTGTGGTCAATATATAAAACTACCTAAACTTG
GTATGGTTAAGATAAGGGATAAACAAGTACCTCAAGGTAGAATACTTAATGCTACTATATCTAAAGAACCAAGTGGTAGA
TATTATGTATCATTATGCTGTACTGATGTAGATATTGAAGTATTTGAAAATACTAATAATCATATAGGTTTAGATTTAGG
AATTAAAGAATTTTGTATCTCAAGTTGTGGAGACTTTATAGAAAATCCTAAGTATCTTAAGAAGTCATTAAACAAGCTTG
CTAAATTACAAAGAGAATTATCGAGAAAAACAATCGGTAGTTTAAATAGAAATAAAGCAAGATTAAAAGTTGCAGGACTT
CAAGAACATATAGCTAATCAAAGAAATGATTTTCTACAAAAACTATCTACTAAATTAATAAAAGAGAATGATATTATTTG
CATAGAAGATTTACAAGTAAAGAATATGATTAGAAATCGTAAACTATCTCGCTTAATTTCAGATGTATCATGGTCAGAAT
TTATTCGTCAATTAGAATACAAGGCTAATTGGTATGGTAGACAAATTGTAAAGGTAGGTAAATTCTTTGCAAGTTCACAA
ATATGCAATAAATGTGGGTATAAAAACGAGGAAATTAAGGACTTAAATATAAGAGAATGGATTTGTCCTAGTTGTAATGA
AACTCACGATAGAGATATAAATGCAAGTATAAATATATTAAAAGAAGGATTAAGACTAATAACGATTCAAAATAAATAA

Upstream 100 bases:

>100_bases
ATTATGATAGGTGATTAATAAATTGTTCACCACAGCATTATATAATATATTAAATATGATAAAATCATTAAAAAGTGTAT
CAAAAAACAATTAACGTGAG

Downstream 100 bases:

>100_bases
CTTATGTAAGAACCGTAGGAACTACGGGGATAGCCTGTGGAGAATTAGTAAGACATATTTTAATATGCAAAATTCTGTGA
AGCAGGAACCCTGTGACTTT

Product: transposase-like protein B

Products: NA

Alternate protein names: ORF401 [H]

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MIAVKKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIDVYKSDKETFTYKQCSSDLTNLKKELKWLKEPDKFSLQN
ALKDLDNAYKKFFKEKAGFPKFKSKKINRFSYKTNFTNGNIMYCGQYIKLPKLGMVKIRDKQVPQGRILNATISKEPSGR
YYVSLCCTDVDIEVFENTNNHIGLDLGIKEFCISSCGDFIENPKYLKKSLNKLAKLQRELSRKTIGSLNRNKARLKVAGL
QEHIANQRNDFLQKLSTKLIKENDIICIEDLQVKNMIRNRKLSRLISDVSWSEFIRQLEYKANWYGRQIVKVGKFFASSQ
ICNKCGYKNEEIKDLNIREWICPSCNETHDRDINASINILKEGLRLITIQNK

Sequences:

>Translated_372_residues
MIAVKKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIDVYKSDKETFTYKQCSSDLTNLKKELKWLKEPDKFSLQN
ALKDLDNAYKKFFKEKAGFPKFKSKKINRFSYKTNFTNGNIMYCGQYIKLPKLGMVKIRDKQVPQGRILNATISKEPSGR
YYVSLCCTDVDIEVFENTNNHIGLDLGIKEFCISSCGDFIENPKYLKKSLNKLAKLQRELSRKTIGSLNRNKARLKVAGL
QEHIANQRNDFLQKLSTKLIKENDIICIEDLQVKNMIRNRKLSRLISDVSWSEFIRQLEYKANWYGRQIVKVGKFFASSQ
ICNKCGYKNEEIKDLNIREWICPSCNETHDRDINASINILKEGLRLITIQNK
>Mature_372_residues
MIAVKKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIDVYKSDKETFTYKQCSSDLTNLKKELKWLKEPDKFSLQN
ALKDLDNAYKKFFKEKAGFPKFKSKKINRFSYKTNFTNGNIMYCGQYIKLPKLGMVKIRDKQVPQGRILNATISKEPSGR
YYVSLCCTDVDIEVFENTNNHIGLDLGIKEFCISSCGDFIENPKYLKKSLNKLAKLQRELSRKTIGSLNRNKARLKVAGL
QEHIANQRNDFLQKLSTKLIKENDIICIEDLQVKNMIRNRKLSRLISDVSWSEFIRQLEYKANWYGRQIVKVGKFFASSQ
ICNKCGYKNEEIKDLNIREWICPSCNETHDRDINASINILKEGLRLITIQNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the transposase 35 family [H]

Homologues:

Organism=Escherichia coli, GI288549314, Length=363, Percent_Identity=33.6088154269972, Blast_Score=182, Evalue=3e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001959
- InterPro:   IPR010095
- InterPro:   IPR021027 [H]

Pfam domain/function: PF12323 HTH_14; PF01385 Transposase_2; PF07282 Transposase_35 [H]

EC number: NA

Molecular weight: Translated: 43591; Mature: 43591

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAVKKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIDVYKSDKETFTYKQCSSDL
CCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
TNLKKELKWLKEPDKFSLQNALKDLDNAYKKFFKEKAGFPKFKSKKINRFSYKTNFTNGN
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHEEEEEECCCCC
IMYCGQYIKLPKLGMVKIRDKQVPQGRILNATISKEPSGRYYVSLCCTDVDIEVFENTNN
EEEECCEECCCCCCEEEECCCCCCCCCEEEEEECCCCCCCEEEEEEEECCEEEEEECCCC
HIGLDLGIKEFCISSCGDFIENPKYLKKSLNKLAKLQRELSRKTIGSLNRNKARLKVAGL
EEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHH
QEHIANQRNDFLQKLSTKLIKENDIICIEDLQVKNMIRNRKLSRLISDVSWSEFIRQLEY
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
KANWYGRQIVKVGKFFASSQICNKCGYKNEEIKDLNIREWICPSCNETHDRDINASINIL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHH
KEGLRLITIQNK
HCCCEEEEEECC
>Mature Secondary Structure
MIAVKKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIDVYKSDKETFTYKQCSSDL
CCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
TNLKKELKWLKEPDKFSLQNALKDLDNAYKKFFKEKAGFPKFKSKKINRFSYKTNFTNGN
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHEEEEEECCCCC
IMYCGQYIKLPKLGMVKIRDKQVPQGRILNATISKEPSGRYYVSLCCTDVDIEVFENTNN
EEEECCEECCCCCCEEEECCCCCCCCCEEEEEECCCCCCCEEEEEEEECCEEEEEECCCC
HIGLDLGIKEFCISSCGDFIENPKYLKKSLNKLAKLQRELSRKTIGSLNRNKARLKVAGL
EEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHH
QEHIANQRNDFLQKLSTKLIKENDIICIEDLQVKNMIRNRKLSRLISDVSWSEFIRQLEY
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
KANWYGRQIVKVGKFFASSQICNKCGYKNEEIKDLNIREWICPSCNETHDRDINASINIL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHH
KEGLRLITIQNK
HCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7665509 [H]