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The map label for this gene is yhcC [H]

Identifier: 126698845

GI number: 126698845

Start: 1449682

End: 1450752

Strand: Direct

Name: yhcC [H]

Synonym: CD1249

Alternate gene names: 126698845

Gene position: 1449682-1450752 (Clockwise)

Preceding gene: 126698844

Following gene: 126698846

Centisome position: 33.79

GC content: 27.45

Gene sequence:

>1071_bases
ATGAAAAAGAGAATTATACCTATATTTGTTCCTCACAAAGGATGTCCTCATGATTGCATATTTTGTAATCAAAAAAAAAT
AACAGGTGTGAGTACTGATGTTACTAGTGAAGATGCAAGAAATATAATTGAGGAATGTTTAGAGACTATAGATAAAGATG
CAGATGTAGAAATAGCATTTTTTGGTGGTAGCTTTACTGCTATAGATATTGATATACAAAAAAGTTTATTATCAGTTGCT
AAAGAATATGTAGAAAAAGGTCTTGTAAAAGATATTAGAATGTCTACAAGACCAGATTGTATTGATGAAGATATATTAAG
TATGTTAAAAGAATATAAGACAAGTATAATTGAACTAGGAGTACAATCCTTAGATGAAAAAGTATTATTAGATAGTATAA
GAGGTCATCAATCTGAAATTGTATACAAGAGTTCAAAGATGATAAAAAATAGTGGAATCAAACTTGGATTACAGATGATG
ATTGGTCTTCCAGCTGACACAGAAGAAAAGTGTATATTTACAGCAAAAAAATTTGTAGAGCTAAAACCAGATTGTGTTAG
AGTCTATCCAACTTTGGTAGTAAAAGATACAGGTCTTGAAAAGTTAATGGAACAAAATAAATATAATCCATTTACTCTTG
AAGAGAGTGTAAATATAGTAAAAAAAGTTCTTGTACTGTTTTATGTTAATAATATCAATGTAATAAGAGTTGGGCTTCAA
GCTACTGATGATATACAAATTGGAAAAGCTGTTTTAGCAGGACCATATCATCCTGCATTTAGAGAGTTGGTAGAAGCAGA
TATGATAAAAGATTATTTAGAATTTGTTATTTTGCAAAATAAAAATATAAAGCAAATGTTGGTCAAATCTAATAAAAAGA
ATATTTCTAAAATCATAGGAAATAAAAAAACAAATGTTAAATATATGGAAGAAAAATTTGGTGTGCTTTTAAAAACACAA
GAATCAGATTTAGATATAAATCAATTAGAAATTGTGTTAGATGGGAAAAGTTTAATTAGTGCTAATATGAGAGACATTCA
TAGAAAATTGTATGACATTTATGACCTTTAG

Upstream 100 bases:

>100_bases
AGTTAGCTGCTAAAATAGCTTTAAAGAAAAAATTATGGGAAAAATAAATATAATATGTAAAAATATAAAAAGAAATATTT
ATATTAGAAGGATGTTGTAG

Downstream 100 bases:

>100_bases
TTTTAATAATGAAGGGAGAGAAAAGATTTGTATTTAAAAAGACTAGAGTTAAAGGGATTTAAATCCTTTCCAGTAAAAAC
AGATATTATTTTTAAAGAAG

Product: radical SAM superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MKKRIIPIFVPHKGCPHDCIFCNQKKITGVSTDVTSEDARNIIEECLETIDKDADVEIAFFGGSFTAIDIDIQKSLLSVA
KEYVEKGLVKDIRMSTRPDCIDEDILSMLKEYKTSIIELGVQSLDEKVLLDSIRGHQSEIVYKSSKMIKNSGIKLGLQMM
IGLPADTEEKCIFTAKKFVELKPDCVRVYPTLVVKDTGLEKLMEQNKYNPFTLEESVNIVKKVLVLFYVNNINVIRVGLQ
ATDDIQIGKAVLAGPYHPAFRELVEADMIKDYLEFVILQNKNIKQMLVKSNKKNISKIIGNKKTNVKYMEEKFGVLLKTQ
ESDLDINQLEIVLDGKSLISANMRDIHRKLYDIYDL

Sequences:

>Translated_356_residues
MKKRIIPIFVPHKGCPHDCIFCNQKKITGVSTDVTSEDARNIIEECLETIDKDADVEIAFFGGSFTAIDIDIQKSLLSVA
KEYVEKGLVKDIRMSTRPDCIDEDILSMLKEYKTSIIELGVQSLDEKVLLDSIRGHQSEIVYKSSKMIKNSGIKLGLQMM
IGLPADTEEKCIFTAKKFVELKPDCVRVYPTLVVKDTGLEKLMEQNKYNPFTLEESVNIVKKVLVLFYVNNINVIRVGLQ
ATDDIQIGKAVLAGPYHPAFRELVEADMIKDYLEFVILQNKNIKQMLVKSNKKNISKIIGNKKTNVKYMEEKFGVLLKTQ
ESDLDINQLEIVLDGKSLISANMRDIHRKLYDIYDL
>Mature_356_residues
MKKRIIPIFVPHKGCPHDCIFCNQKKITGVSTDVTSEDARNIIEECLETIDKDADVEIAFFGGSFTAIDIDIQKSLLSVA
KEYVEKGLVKDIRMSTRPDCIDEDILSMLKEYKTSIIELGVQSLDEKVLLDSIRGHQSEIVYKSSKMIKNSGIKLGLQMM
IGLPADTEEKCIFTAKKFVELKPDCVRVYPTLVVKDTGLEKLMEQNKYNPFTLEESVNIVKKVLVLFYVNNINVIRVGLQ
ATDDIQIGKAVLAGPYHPAFRELVEADMIKDYLEFVILQNKNIKQMLVKSNKKNISKIIGNKKTNVKYMEEKFGVLLKTQ
ESDLDINQLEIVLDGKSLISANMRDIHRKLYDIYDL

Specific function: Unknown

COG id: COG1243

COG function: function code KB; Histone acetyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0486 [H]

Homologues:

Organism=Homo sapiens, GI23510283, Length=307, Percent_Identity=29.6416938110749, Blast_Score=90, Evalue=2e-18,
Organism=Escherichia coli, GI2367204, Length=203, Percent_Identity=26.1083743842365, Blast_Score=86, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI133955098, Length=268, Percent_Identity=27.2388059701493, Blast_Score=79, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6325171, Length=265, Percent_Identity=28.3018867924528, Blast_Score=84, Evalue=4e-17,
Organism=Drosophila melanogaster, GI19920684, Length=310, Percent_Identity=28.7096774193548, Blast_Score=80, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 40448; Mature: 40448

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRIIPIFVPHKGCPHDCIFCNQKKITGVSTDVTSEDARNIIEECLETIDKDADVEIAF
CCCCEEEEEECCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEE
FGGSFTAIDIDIQKSLLSVAKEYVEKGLVKDIRMSTRPDCIDEDILSMLKEYKTSIIELG
ECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
VQSLDEKVLLDSIRGHQSEIVYKSSKMIKNSGIKLGLQMMIGLPADTEEKCIFTAKKFVE
HHHHHHHHHHHHHCCCHHHEEEHHHHHHHHCCCEEEEHHEEECCCCCCCHHHHHHHHHHH
LKPDCVRVYPTLVVKDTGLEKLMEQNKYNPFTLEESVNIVKKVLVLFYVNNINVIRVGLQ
CCCCCEEECEEEEEECCCHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEEECC
ATDDIQIGKAVLAGPYHPAFRELVEADMIKDYLEFVILQNKNIKQMLVKSNKKNISKIIG
CCCCHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHC
NKKTNVKYMEEKFGVLLKTQESDLDINQLEIVLDGKSLISANMRDIHRKLYDIYDL
CCCCCHHHHHHHCCEEEEECCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKRIIPIFVPHKGCPHDCIFCNQKKITGVSTDVTSEDARNIIEECLETIDKDADVEIAF
CCCCEEEEEECCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEE
FGGSFTAIDIDIQKSLLSVAKEYVEKGLVKDIRMSTRPDCIDEDILSMLKEYKTSIIELG
ECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
VQSLDEKVLLDSIRGHQSEIVYKSSKMIKNSGIKLGLQMMIGLPADTEEKCIFTAKKFVE
HHHHHHHHHHHHHCCCHHHEEEHHHHHHHHCCCEEEEHHEEECCCCCCCHHHHHHHHHHH
LKPDCVRVYPTLVVKDTGLEKLMEQNKYNPFTLEESVNIVKKVLVLFYVNNINVIRVGLQ
CCCCCEEECEEEEEECCCHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEEECC
ATDDIQIGKAVLAGPYHPAFRELVEADMIKDYLEFVILQNKNIKQMLVKSNKKNISKIIG
CCCCHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHC
NKKTNVKYMEEKFGVLLKTQESDLDINQLEIVLDGKSLISANMRDIHRKLYDIYDL
CCCCCHHHHHHHCCEEEEECCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]