The gene/protein map for NC_009089 is currently unavailable.
Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is spoIIIAE [H]

Identifier: 126698792

GI number: 126698792

Start: 1396465

End: 1397676

Strand: Direct

Name: spoIIIAE [H]

Synonym: CD1196

Alternate gene names: 126698792

Gene position: 1396465-1397676 (Clockwise)

Preceding gene: 126698791

Following gene: 126698793

Centisome position: 32.55

GC content: 27.15

Gene sequence:

>1212_bases
TTGCTTATGAAAAAAAGATTTTTACCAATGATTATAGGTTTTTTATTTACTTTCTTTTTTGTAAATATCTTTGCTATTAT
GATATTTGCTAATGAAGTACCAAGTAGTGAAGATAAAGAATATGGTGAAACAAAAAATAGCATAGATAAGTATATAGATG
GTCAATTAGACAAGCTAGATATAAATGAGATTCAAGACTATATAAATAAAGAAATAGTTATTAATGATGTTAATTTAAAA
TCATTTGTAAAAGATTTAATTAGTGGAGAAAAAAATATCTTAGATTTATTCAATAAAGATGGATTGAAGATATTGATGTT
TGATGAATTTAAAGCAAGTTTAAAGGTAGTAGCAGTAATTTTGGTACTGGCTCTGTTATCATCTATTTTAAAGAGTCTGG
AAAACTCTTTTTCATCAGGTGCAGTAAGTCAAATAGCAACATATATAATATTTATCACAATGGTATCACTTACACTTATT
GGTTTTAAAGATGTATTACAGATTTGCTATGATGCAATAGACCATACTGTAGGTCTTATGCAAGTTATAATGCCAATATT
AATAACATTTTTACTTTTAATTGGATTCCCAATAACGTCGACTACTTTGAATCCTATCTTCATAGGAGGAGTAACATTTA
TAAATGTATTTTTTAAAAATTTTCTATTTGTATCTATTACTGTTGCATTTGGAATTTTAATAATAAACAATTTATCAAAA
AATATAAGGCTAAAGAGATTTTTCTCCTTTGTAAAACAAATAAATTATGTTTCTATTGGAGCTATGTTTACTGTTTACTT
AGGTCTTGTATCCATACAAGGACTGTATGTAACCAGTTTTGATAAATTCAGTGTAAAGACTGCTAAATTTGCTATAGGTA
ATTTTATTCCTGTTGTAGGTGGATTTGTATCTGACTCTGTGGATATTTTATTATCTTCATCTCAGCTTATAAAAAATATA
TTTGGAGGAATAGGGCTTATCTTACTTGTTGGAATTTGCTTACTTCCAGTAATAAAAATTTTATCAGTAATAGTAGTGTA
CAAATTAGCAGCAATAATTGTAGAGCCTGTTGGAGAGGATGGAATATCTAATTTTTTAAATGAAGTGGCAAATTTAATGA
TAATAATGCTAGCATCAGTAATTGCTATAACAGTAATGTTCTTTGTAACTGTAGCTATCTTGACCTCGATAAGTGTCGTA
AGTCAAGGGTAA

Upstream 100 bases:

>100_bases
GGTGGTGAATATAATTCCATAGATGTGTATCTTGGAATGAATATAAGTATATTAGAGAGCTTTCGTTGTATTGAGGTTTA
TAGAGTGAAGAGAGGCATGG

Downstream 100 bases:

>100_bases
TTTATATATCAGTGAAAAATAATTACATTTAATCTAATGTTTTTAGAGAGGAGGATGCTATGTTAGAGGGCATAAAGGCA
TGGATAGTTAGTGTTTTGAT

Product: stage III sporulation-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MLMKKRFLPMIIGFLFTFFFVNIFAIMIFANEVPSSEDKEYGETKNSIDKYIDGQLDKLDINEIQDYINKEIVINDVNLK
SFVKDLISGEKNILDLFNKDGLKILMFDEFKASLKVVAVILVLALLSSILKSLENSFSSGAVSQIATYIIFITMVSLTLI
GFKDVLQICYDAIDHTVGLMQVIMPILITFLLLIGFPITSTTLNPIFIGGVTFINVFFKNFLFVSITVAFGILIINNLSK
NIRLKRFFSFVKQINYVSIGAMFTVYLGLVSIQGLYVTSFDKFSVKTAKFAIGNFIPVVGGFVSDSVDILLSSSQLIKNI
FGGIGLILLVGICLLPVIKILSVIVVYKLAAIIVEPVGEDGISNFLNEVANLMIIMLASVIAITVMFFVTVAILTSISVV
SQG

Sequences:

>Translated_403_residues
MLMKKRFLPMIIGFLFTFFFVNIFAIMIFANEVPSSEDKEYGETKNSIDKYIDGQLDKLDINEIQDYINKEIVINDVNLK
SFVKDLISGEKNILDLFNKDGLKILMFDEFKASLKVVAVILVLALLSSILKSLENSFSSGAVSQIATYIIFITMVSLTLI
GFKDVLQICYDAIDHTVGLMQVIMPILITFLLLIGFPITSTTLNPIFIGGVTFINVFFKNFLFVSITVAFGILIINNLSK
NIRLKRFFSFVKQINYVSIGAMFTVYLGLVSIQGLYVTSFDKFSVKTAKFAIGNFIPVVGGFVSDSVDILLSSSQLIKNI
FGGIGLILLVGICLLPVIKILSVIVVYKLAAIIVEPVGEDGISNFLNEVANLMIIMLASVIAITVMFFVTVAILTSISVV
SQG
>Mature_403_residues
MLMKKRFLPMIIGFLFTFFFVNIFAIMIFANEVPSSEDKEYGETKNSIDKYIDGQLDKLDINEIQDYINKEIVINDVNLK
SFVKDLISGEKNILDLFNKDGLKILMFDEFKASLKVVAVILVLALLSSILKSLENSFSSGAVSQIATYIIFITMVSLTLI
GFKDVLQICYDAIDHTVGLMQVIMPILITFLLLIGFPITSTTLNPIFIGGVTFINVFFKNFLFVSITVAFGILIINNLSK
NIRLKRFFSFVKQINYVSIGAMFTVYLGLVSIQGLYVTSFDKFSVKTAKFAIGNFIPVVGGFVSDSVDILLSSSQLIKNI
FGGIGLILLVGICLLPVIKILSVIVVYKLAAIIVEPVGEDGISNFLNEVANLMIIMLASVIAITVMFFVTVAILTSISVV
SQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014194 [H]

Pfam domain/function: PF09546 Spore_III_AE [H]

EC number: NA

Molecular weight: Translated: 44497; Mature: 44497

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMKKRFLPMIIGFLFTFFFVNIFAIMIFANEVPSSEDKEYGETKNSIDKYIDGQLDKLD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHCCCCCCCC
INEIQDYINKEIVINDVNLKSFVKDLISGEKNILDLFNKDGLKILMFDEFKASLKVVAVI
HHHHHHHCCCCEEEECCCHHHHHHHHHCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHH
LVLALLSSILKSLENSFSSGAVSQIATYIIFITMVSLTLIGFKDVLQICYDAIDHTVGLM
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVIMPILITFLLLIGFPITSTTLNPIFIGGVTFINVFFKNFLFVSITVAFGILIINNLSK
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NIRLKRFFSFVKQINYVSIGAMFTVYLGLVSIQGLYVTSFDKFSVKTAKFAIGNFIPVVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHH
GFVSDSVDILLSSSQLIKNIFGGIGLILLVGICLLPVIKILSVIVVYKLAAIIVEPVGED
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
GISNFLNEVANLMIIMLASVIAITVMFFVTVAILTSISVVSQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLMKKRFLPMIIGFLFTFFFVNIFAIMIFANEVPSSEDKEYGETKNSIDKYIDGQLDKLD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHCCCCCCCC
INEIQDYINKEIVINDVNLKSFVKDLISGEKNILDLFNKDGLKILMFDEFKASLKVVAVI
HHHHHHHCCCCEEEECCCHHHHHHHHHCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHH
LVLALLSSILKSLENSFSSGAVSQIATYIIFITMVSLTLIGFKDVLQICYDAIDHTVGLM
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVIMPILITFLLLIGFPITSTTLNPIFIGGVTFINVFFKNFLFVSITVAFGILIINNLSK
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NIRLKRFFSFVKQINYVSIGAMFTVYLGLVSIQGLYVTSFDKFSVKTAKFAIGNFIPVVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHH
GFVSDSVDILLSSSQLIKNIFGGIGLILLVGICLLPVIKILSVIVVYKLAAIIVEPVGED
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
GISNFLNEVANLMIIMLASVIAITVMFFVTVAILTSISVVSQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]