| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is spoIIIAD [H]
Identifier: 126698791
GI number: 126698791
Start: 1396000
End: 1396386
Strand: Direct
Name: spoIIIAD [H]
Synonym: CD1195
Alternate gene names: 126698791
Gene position: 1396000-1396386 (Clockwise)
Preceding gene: 126698790
Following gene: 126698792
Centisome position: 32.54
GC content: 28.94
Gene sequence:
>387_bases TTGGAAATAATGCAATTAATAGGAATTGCAATCATTTCAACTACACTCTGTTTAGTAATTAAAAAAGATAGACCAGAGAT AGCAAATTTCATAGCTATAATAACTGGAGTAATAATACTATTGTCAGTTATGTTTAAGCTAAATTTTATAGTAGATAGTA TACAAGATTTGGCTAACAAGGCTAACATCCCGACTATGTATATATCATTAATAATAAAATTAATTGGGATAGCATACTTA ATGGAATTTGCGATACAACTTTGTAAAGATTGTGGGGAAGGAAACATTGCTTCAAAACTAGAATTTGGAGGTAAAATAAT AGTTATGTCAATGTCTTTCCCTATACTTTTGTCCATTGTAGAAATGGTGGTGAATATAATTCCATAG
Upstream 100 bases:
>100_bases AGGTGTAATAATCGTATTGGGTATGGTAATAACAGAAATAAGTGACTTGTTTAATACTGTAAGAACAATGTTTCAACTTT ACTAAAGAGGAGGGAGTAAT
Downstream 100 bases:
>100_bases ATGTGTATCTTGGAATGAATATAAGTATATTAGAGAGCTTTCGTTGTATTGAGGTTTATAGAGTGAAGAGAGGCATGGTT GCTTATGAAAAAAAGATTTT
Product: stage III sporulation protein AD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MEIMQLIGIAIISTTLCLVIKKDRPEIANFIAIITGVIILLSVMFKLNFIVDSIQDLANKANIPTMYISLIIKLIGIAYL MEFAIQLCKDCGEGNIASKLEFGGKIIVMSMSFPILLSIVEMVVNIIP
Sequences:
>Translated_128_residues MEIMQLIGIAIISTTLCLVIKKDRPEIANFIAIITGVIILLSVMFKLNFIVDSIQDLANKANIPTMYISLIIKLIGIAYL MEFAIQLCKDCGEGNIASKLEFGGKIIVMSMSFPILLSIVEMVVNIIP >Mature_128_residues MEIMQLIGIAIISTTLCLVIKKDRPEIANFIAIITGVIILLSVMFKLNFIVDSIQDLANKANIPTMYISLIIKLIGIAYL MEFAIQLCKDCGEGNIASKLEFGGKIIVMSMSFPILLSIVEMVVNIIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014211 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14076; Mature: 14076
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIMQLIGIAIISTTLCLVIKKDRPEIANFIAIITGVIILLSVMFKLNFIVDSIQDLANK CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANIPTMYISLIIKLIGIAYLMEFAIQLCKDCGEGNIASKLEFGGKIIVMSMSFPILLSIV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEEECCHHHHHHHH EMVVNIIP HHHHHHCC >Mature Secondary Structure MEIMQLIGIAIISTTLCLVIKKDRPEIANFIAIITGVIILLSVMFKLNFIVDSIQDLANK CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANIPTMYISLIIKLIGIAYLMEFAIQLCKDCGEGNIASKLEFGGKIIVMSMSFPILLSIV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEEECCHHHHHHHH EMVVNIIP HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]