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The map label for this gene is yvdE [H]

Identifier: 126698784

GI number: 126698784

Start: 1389188

End: 1389913

Strand: Direct

Name: yvdE [H]

Synonym: CD1188

Alternate gene names: 126698784

Gene position: 1389188-1389913 (Clockwise)

Preceding gene: 126698783

Following gene: 126698785

Centisome position: 32.38

GC content: 29.2

Gene sequence:

>726_bases
ATGAAACCAATAATAGGGATTTTAGGAAATTTAATAATAATGGAAAATGGTATGTTTCCAGGTCTTGAAAGGTCATATGT
AAATAATGATTATATAAATGCAGTGCTAAAAGGTGGCGGTAGTCCAGTAATAATTCCTGTAAATACAGATAAAGAAGTTA
TAAAAAAACAGATTGAAATGGTTGATGGAGTCTTAATATCTGGGGGATGGGATATCAATCCTCAACTGTATGGAGAAGAA
ACAAGAGAAGAAACGACATTTATATATCCAGAAGTGGATGAATTTGATTTAATTGCAATAAGTATAGCATTAGAACTTAA
AAAGCCTATATTAGGTGTATGTAGGGGACTACAAATTTTAAATGTAAGTTTAGGAGGAACTTTATATCAAGATAATAATC
TTATAGAAGGAAGTTATATAAAACATACACAATCTTCTAAAAGACATGTAGCTACTCATAAAGTTGATGTTAAAGAAGGA
AGTATTTTAGAGGGAATTTTAGGAAAACAATTACTTACAAATAGTTATCATCATCAAAGTGTCAATCAGCTTGGAAAAGG
ATTAAAAGCCATAGCATACTCAAAAGATGGTATAATAGAAGCTATTGAGAAAGAGGATGAAAATTTTGTAGTAGGAGTAC
AGTGGCATCCAGAAATGATGGTAGATTACTGTGATAAAATGGAAAAACTATTTAAATATTTTATAAATATTTGTTCGAAT
TTATAA

Upstream 100 bases:

>100_bases
ACAAAGCCAACATCTTGCCCAGACCAACTGTCTCTAGCATTGGAAAATTATATGAATATAAAGTAATACATAAAACAATC
GATTAGTTAGGAGTTTAATT

Downstream 100 bases:

>100_bases
TATACCTTGGGGGGATTGAGCATGAACGAAAAGAACAAAATGGGATTAATAAGTATTATACTTTTAGGTATTAATGCAGT
AGTAGGAGCTGGAGTTTTTC

Product: glutamine amidotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MKPIIGILGNLIIMENGMFPGLERSYVNNDYINAVLKGGGSPVIIPVNTDKEVIKKQIEMVDGVLISGGWDINPQLYGEE
TREETTFIYPEVDEFDLIAISIALELKKPILGVCRGLQILNVSLGGTLYQDNNLIEGSYIKHTQSSKRHVATHKVDVKEG
SILEGILGKQLLTNSYHHQSVNQLGKGLKAIAYSKDGIIEAIEKEDENFVVGVQWHPEMMVDYCDKMEKLFKYFINICSN
L

Sequences:

>Translated_241_residues
MKPIIGILGNLIIMENGMFPGLERSYVNNDYINAVLKGGGSPVIIPVNTDKEVIKKQIEMVDGVLISGGWDINPQLYGEE
TREETTFIYPEVDEFDLIAISIALELKKPILGVCRGLQILNVSLGGTLYQDNNLIEGSYIKHTQSSKRHVATHKVDVKEG
SILEGILGKQLLTNSYHHQSVNQLGKGLKAIAYSKDGIIEAIEKEDENFVVGVQWHPEMMVDYCDKMEKLFKYFINICSN
L
>Mature_241_residues
MKPIIGILGNLIIMENGMFPGLERSYVNNDYINAVLKGGGSPVIIPVNTDKEVIKKQIEMVDGVLISGGWDINPQLYGEE
TREETTFIYPEVDEFDLIAISIALELKKPILGVCRGLQILNVSLGGTLYQDNNLIEGSYIKHTQSSKRHVATHKVDVKEG
SILEGILGKQLLTNSYHHQSVNQLGKGLKAIAYSKDGIIEAIEKEDENFVVGVQWHPEMMVDYCDKMEKLFKYFINICSN
L

Specific function: Unknown

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=246, Percent_Identity=29.2682926829268, Blast_Score=113, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: NA

Molecular weight: Translated: 26928; Mature: 26928

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPIIGILGNLIIMENGMFPGLERSYVNNDYINAVLKGGGSPVIIPVNTDKEVIKKQIEM
CCCHHHHHCCEEEEECCCCCCCCHHHCCCHHHHHHEECCCCEEEEEECCCHHHHHHHHHH
VDGVLISGGWDINPQLYGEETREETTFIYPEVDEFDLIAISIALELKKPILGVCRGLQIL
HCCEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEEHHHHHHHHHHHCCCEEE
NVSLGGTLYQDNNLIEGSYIKHTQSSKRHVATHKVDVKEGSILEGILGKQLLTNSYHHQS
EEECCCEEEECCCEECCCCCCCCCCCCCCHHEEEEECCCCCHHHHHHHHHHHHCCHHHHH
VNQLGKGLKAIAYSKDGIIEAIEKEDENFVVGVQWHPEMMVDYCDKMEKLFKYFINICSN
HHHHHCCCEEEEECCCCHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHC
L
C
>Mature Secondary Structure
MKPIIGILGNLIIMENGMFPGLERSYVNNDYINAVLKGGGSPVIIPVNTDKEVIKKQIEM
CCCHHHHHCCEEEEECCCCCCCCHHHCCCHHHHHHEECCCCEEEEEECCCHHHHHHHHHH
VDGVLISGGWDINPQLYGEETREETTFIYPEVDEFDLIAISIALELKKPILGVCRGLQIL
HCCEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEEHHHHHHHHHHHCCCEEE
NVSLGGTLYQDNNLIEGSYIKHTQSSKRHVATHKVDVKEGSILEGILGKQLLTNSYHHQS
EEECCCEEEECCCEECCCCCCCCCCCCCCHHEEEEECCCCCHHHHHHHHHHHHCCHHHHH
VNQLGKGLKAIAYSKDGIIEAIEKEDENFVVGVQWHPEMMVDYCDKMEKLFKYFINICSN
HHHHHCCCEEEEECCCCHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]