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The map label for this gene is ydjE [C]

Identifier: 126698785

GI number: 126698785

Start: 1389920

End: 1391248

Strand: Direct

Name: ydjE [C]

Synonym: CD1189

Alternate gene names: 126698785

Gene position: 1389920-1391248 (Clockwise)

Preceding gene: 126698784

Following gene: 126698786

Centisome position: 32.4

GC content: 32.58

Gene sequence:

>1329_bases
TTGGGGGGATTGAGCATGAACGAAAAGAACAAAATGGGATTAATAAGTATTATACTTTTAGGTATTAATGCAGTAGTAGG
AGCTGGAGTTTTTCTATTACCAGGAGATGCAATGAAATCATTTGGTGTAGCAAGTATATTTGTATATATATTTGATATGT
TGTTAGTTTTATCTATGGCATTCTGTTTTGCTGAGGTTGCAGGTAAATTTAATAAAAATGGTGCTGCCTATGTATATACA
AAAGAAGCTTTTGGAGATTTTTGTGGTTTTGAAGTAGGTCTTATGAAATGGGTAATAGGATGTATTTCTTGGGGAGCTTT
AATAGTAGGTTTTCCTACATCATTATCAGCAGTATGGGCTCCAGCAGGTGAACCACATATACAAAAAATTATAATTGTAG
CCATGATAGTTGGGCTTACAATTATAAACTTATTAGGTGTATCTCTATCAAAAATTGTACAAAATGTTATAACTGTAGGT
AAACTAATTCCATTAATACTATTTATAGGAATAGGTATATTTTTTATAAAAGGAGTTAATTTTACTTCTTCAACAATGGT
ACCTCCAGGAGCTGGAGCAACAGAGTTTGGAGCAGCAGCACTTTTAATGTTTTATTCATTTACAGGATTTGAATCTATAG
CAGTTGCAGCAGAAGATATGGAGAATCCACAAAAAAATATACCAATAGCAATTATAAGTGTAATAGTAATTGCATCAATA
ATATATATATTAAATCAAGTTGTATGTGTTGGTATACTAGGAGATTCGTTATCTAGTACATCTACACCAGTGGCAGATGC
TGCAAGAATATGCTTTGGAAATATGGGAGCTGGATTGGTTACCTTTGGAACCTTGGTTTCTGTTGGTGGAATTTGTATGT
GTGGTGCTTTTGTAAATCCAAGAAGTTGTGTAGCTTTAGCTGATGATAAAATGTTACCGAGAATATTTGCAAGAAAAGAT
AAAAAAGGTACACCATATGTAGCGATAATAGCTACTATGCTAATCACTATACCAATAGCTCTATCTGGAAGTTTTGCTGA
ATTAGCAGCAATAAGTGCAGTTGCTAGATTCATACAATACATACCAACATCTTTATCCGTATTAGTGTTTAGAAAGAAAA
GACCAGAATTAGTAGGTACTTTTAAAACTCCTTTTGGAGCAGTGATTCCTCTAATTGCTGTATGTGTTGGAACATGGTTA
TTATTCCAAGCATCTATGCATCAATTAATTATGGGATTAGGAGCTTTGGCAATTGGAGTACCATTATACTTTATAATGAA
GTCTTATAATAGAAAAGTCTATGGTGAAAATTTAAAGAAAATAGTTTAA

Upstream 100 bases:

>100_bases
AGGAGTACAGTGGCATCCAGAAATGATGGTAGATTACTGTGATAAAATGGAAAAACTATTTAAATATTTTATAAATATTT
GTTCGAATTTATAATATACC

Downstream 100 bases:

>100_bases
TTATGTTATAACAGTTTATTGAGTTAAAGTTAGACATTGGCAGAAAATTAAATACAAATAAGTATCTATAAGGCTATATT
AAAATATTATTAATTTTTTA

Product: amino acid permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MGGLSMNEKNKMGLISIILLGINAVVGAGVFLLPGDAMKSFGVASIFVYIFDMLLVLSMAFCFAEVAGKFNKNGAAYVYT
KEAFGDFCGFEVGLMKWVIGCISWGALIVGFPTSLSAVWAPAGEPHIQKIIIVAMIVGLTIINLLGVSLSKIVQNVITVG
KLIPLILFIGIGIFFIKGVNFTSSTMVPPGAGATEFGAAALLMFYSFTGFESIAVAAEDMENPQKNIPIAIISVIVIASI
IYILNQVVCVGILGDSLSSTSTPVADAARICFGNMGAGLVTFGTLVSVGGICMCGAFVNPRSCVALADDKMLPRIFARKD
KKGTPYVAIIATMLITIPIALSGSFAELAAISAVARFIQYIPTSLSVLVFRKKRPELVGTFKTPFGAVIPLIAVCVGTWL
LFQASMHQLIMGLGALAIGVPLYFIMKSYNRKVYGENLKKIV

Sequences:

>Translated_442_residues
MGGLSMNEKNKMGLISIILLGINAVVGAGVFLLPGDAMKSFGVASIFVYIFDMLLVLSMAFCFAEVAGKFNKNGAAYVYT
KEAFGDFCGFEVGLMKWVIGCISWGALIVGFPTSLSAVWAPAGEPHIQKIIIVAMIVGLTIINLLGVSLSKIVQNVITVG
KLIPLILFIGIGIFFIKGVNFTSSTMVPPGAGATEFGAAALLMFYSFTGFESIAVAAEDMENPQKNIPIAIISVIVIASI
IYILNQVVCVGILGDSLSSTSTPVADAARICFGNMGAGLVTFGTLVSVGGICMCGAFVNPRSCVALADDKMLPRIFARKD
KKGTPYVAIIATMLITIPIALSGSFAELAAISAVARFIQYIPTSLSVLVFRKKRPELVGTFKTPFGAVIPLIAVCVGTWL
LFQASMHQLIMGLGALAIGVPLYFIMKSYNRKVYGENLKKIV
>Mature_441_residues
GGLSMNEKNKMGLISIILLGINAVVGAGVFLLPGDAMKSFGVASIFVYIFDMLLVLSMAFCFAEVAGKFNKNGAAYVYTK
EAFGDFCGFEVGLMKWVIGCISWGALIVGFPTSLSAVWAPAGEPHIQKIIIVAMIVGLTIINLLGVSLSKIVQNVITVGK
LIPLILFIGIGIFFIKGVNFTSSTMVPPGAGATEFGAAALLMFYSFTGFESIAVAAEDMENPQKNIPIAIISVIVIASII
YILNQVVCVGILGDSLSSTSTPVADAARICFGNMGAGLVTFGTLVSVGGICMCGAFVNPRSCVALADDKMLPRIFARKDK
KGTPYVAIIATMLITIPIALSGSFAELAAISAVARFIQYIPTSLSVLVFRKKRPELVGTFKTPFGAVIPLIAVCVGTWLL
FQASMHQLIMGLGALAIGVPLYFIMKSYNRKVYGENLKKIV

Specific function: Probable amino-acid or metabolite transport protein [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI115648063, Length=451, Percent_Identity=25.2771618625277, Blast_Score=89, Evalue=8e-18,
Organism=Homo sapiens, GI115648022, Length=451, Percent_Identity=25.2771618625277, Blast_Score=89, Evalue=8e-18,
Organism=Homo sapiens, GI258645169, Length=407, Percent_Identity=25.3071253071253, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI187423910, Length=416, Percent_Identity=25.7211538461538, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI7657591, Length=416, Percent_Identity=25.7211538461538, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI181337167, Length=383, Percent_Identity=26.3707571801567, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI33286428, Length=462, Percent_Identity=23.8095238095238, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI186910308, Length=321, Percent_Identity=27.1028037383178, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI186910306, Length=321, Percent_Identity=27.1028037383178, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI186910304, Length=321, Percent_Identity=27.1028037383178, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI4507047, Length=411, Percent_Identity=24.330900243309, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI258614005, Length=408, Percent_Identity=24.7549019607843, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI258614003, Length=408, Percent_Identity=24.7549019607843, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI114326544, Length=423, Percent_Identity=22.4586288416076, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI114326550, Length=423, Percent_Identity=22.4586288416076, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI110347453, Length=333, Percent_Identity=22.8228228228228, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI7657683, Length=373, Percent_Identity=24.9329758713137, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI9790235, Length=342, Percent_Identity=24.5614035087719, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI2367353, Length=392, Percent_Identity=29.5918367346939, Blast_Score=145, Evalue=5e-36,
Organism=Escherichia coli, GI87082250, Length=335, Percent_Identity=26.2686567164179, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI87081708, Length=472, Percent_Identity=24.364406779661, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1790575, Length=385, Percent_Identity=24.6753246753247, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1786908, Length=385, Percent_Identity=22.3376623376623, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI1790653, Length=414, Percent_Identity=21.9806763285024, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1789017, Length=352, Percent_Identity=25, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1788480, Length=468, Percent_Identity=24.1452991452991, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1786302, Length=453, Percent_Identity=23.841059602649, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI1786694, Length=440, Percent_Identity=22.5, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17531343, Length=410, Percent_Identity=26.3414634146341, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17532491, Length=390, Percent_Identity=23.5897435897436, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17533459, Length=435, Percent_Identity=23.2183908045977, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71993915, Length=449, Percent_Identity=23.3853006681514, Blast_Score=78, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17540018, Length=457, Percent_Identity=23.4135667396061, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI32566699, Length=352, Percent_Identity=25.2840909090909, Blast_Score=76, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI71995382, Length=396, Percent_Identity=22.4747474747475, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71995388, Length=396, Percent_Identity=22.4747474747475, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71982612, Length=425, Percent_Identity=19.7647058823529, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71982608, Length=425, Percent_Identity=19.7647058823529, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI45550968, Length=456, Percent_Identity=26.5350877192982, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI19921172, Length=456, Percent_Identity=26.5350877192982, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24667468, Length=390, Percent_Identity=25.8974358974359, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI221512776, Length=389, Percent_Identity=24.9357326478149, Blast_Score=92, Evalue=8e-19,
Organism=Drosophila melanogaster, GI24651635, Length=438, Percent_Identity=22.8310502283105, Blast_Score=92, Evalue=9e-19,
Organism=Drosophila melanogaster, GI24651633, Length=438, Percent_Identity=22.8310502283105, Blast_Score=92, Evalue=9e-19,
Organism=Drosophila melanogaster, GI24666159, Length=389, Percent_Identity=24.9357326478149, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI221331183, Length=449, Percent_Identity=23.6080178173719, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI17647653, Length=449, Percent_Identity=23.6080178173719, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24664379, Length=449, Percent_Identity=23.6080178173719, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24668806, Length=393, Percent_Identity=24.6819338422392, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21356285, Length=393, Percent_Identity=24.6819338422392, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24668802, Length=393, Percent_Identity=24.6819338422392, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21357367, Length=455, Percent_Identity=23.7362637362637, Blast_Score=82, Evalue=8e-16,
Organism=Drosophila melanogaster, GI281366235, Length=395, Percent_Identity=24.0506329113924, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI116007820, Length=395, Percent_Identity=24.0506329113924, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI161077963, Length=382, Percent_Identity=23.2984293193717, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24641993, Length=399, Percent_Identity=24.812030075188, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24641995, Length=399, Percent_Identity=24.812030075188, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 46794; Mature: 46663

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGLSMNEKNKMGLISIILLGINAVVGAGVFLLPGDAMKSFGVASIFVYIFDMLLVLSMA
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
FCFAEVAGKFNKNGAAYVYTKEAFGDFCGFEVGLMKWVIGCISWGALIVGFPTSLSAVWA
HHHHHHHHCCCCCCCEEEEEHHHHHHHHCHHHHHHHHHHHHHHHHHHEEECCCCHHHHCC
PAGEPHIQKIIIVAMIVGLTIINLLGVSLSKIVQNVITVGKLIPLILFIGIGIFFIKGVN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FTSSTMVPPGAGATEFGAAALLMFYSFTGFESIAVAAEDMENPQKNIPIAIISVIVIASI
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
IYILNQVVCVGILGDSLSSTSTPVADAARICFGNMGAGLVTFGTLVSVGGICMCGAFVNP
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHCCCCCC
RSCVALADDKMLPRIFARKDKKGTPYVAIIATMLITIPIALSGSFAELAAISAVARFIQY
CCEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
IPTSLSVLVFRKKRPELVGTFKTPFGAVIPLIAVCVGTWLLFQASMHQLIMGLGALAIGV
HCCHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLYFIMKSYNRKVYGENLKKIV
HHHHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure 
GGLSMNEKNKMGLISIILLGINAVVGAGVFLLPGDAMKSFGVASIFVYIFDMLLVLSMA
CCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
FCFAEVAGKFNKNGAAYVYTKEAFGDFCGFEVGLMKWVIGCISWGALIVGFPTSLSAVWA
HHHHHHHHCCCCCCCEEEEEHHHHHHHHCHHHHHHHHHHHHHHHHHHEEECCCCHHHHCC
PAGEPHIQKIIIVAMIVGLTIINLLGVSLSKIVQNVITVGKLIPLILFIGIGIFFIKGVN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FTSSTMVPPGAGATEFGAAALLMFYSFTGFESIAVAAEDMENPQKNIPIAIISVIVIASI
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
IYILNQVVCVGILGDSLSSTSTPVADAARICFGNMGAGLVTFGTLVSVGGICMCGAFVNP
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHCCCCCC
RSCVALADDKMLPRIFARKDKKGTPYVAIIATMLITIPIALSGSFAELAAISAVARFIQY
CCEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
IPTSLSVLVFRKKRPELVGTFKTPFGAVIPLIAVCVGTWLLFQASMHQLIMGLGALAIGV
HCCHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLYFIMKSYNRKVYGENLKKIV
HHHHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]