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The map label for this gene is yhcK [H]

Identifier: 126698781

GI number: 126698781

Start: 1384808

End: 1386526

Strand: Direct

Name: yhcK [H]

Synonym: CD1185

Alternate gene names: 126698781

Gene position: 1384808-1386526 (Clockwise)

Preceding gene: 126698780

Following gene: 126698782

Centisome position: 32.28

GC content: 26.0

Gene sequence:

>1719_bases
TTGAATTTTAGACTACCAAAGAAAAGGTTACCCAAAAAGATAATTTTTATATGTATAATACTTATTAGTATTATTTTGTT
TATAAAGTATGACCAAAATGGATTGAAAGAAAGAGAAATTATAAATAAGGGAAAATATATGTCTGAAAGCCTTGTGGCAG
ATAAGGAGTATGATGAAGCAAAAAAAGTGGTTAAGACTTCTTTTGAATCTATTCCAGAAAAAAAATACAATAAAGTATAT
AATGAAGTTTGGGATATGTTAAAGACTATTTCATATGTTCCAGATGGAACGAAGATAGTCATTGATTCTTTAGAAAAGAT
GAGAGAATCAGATGTGAAATTATCTGATGAATGTAGATTTAATATAGAAAAAAGATTAGCATCAGTGTATATAATGGATA
ATAATTATTCTAAGGCAGTAGATTTAACTGTAAAGTCTATAAAGTTGGCTGAGAAATTGGGGAATAATTATGAAAAAGCA
AGACTAGATGTTGATTTGGCGAGCATATTTTTAAAGATAGGTGGCTATGAAACAGGAGAGAAATTAATAAAGGATTCTTT
TAAAATAGATATTGATGAAGGTGAAAAAAATGGAATGGTTAGATTATATGCTATTATAAATCTAGCAGAAATATATGTAG
AAGAGGGAGAATATGATAAAGCTATTGAAATAAGTAGCAGGATAAAAGATTATAAAAAGTTTGTAAATACGGATAATTAC
AATGATTTTGATATAATGGCCTCTATAATGCAGTCAAATGCGTATGTGGGCAAAAATAATATACAAAAGGCAAAGACTTT
TTTAGAAAAAGCTGATTATCTTATAAAATCAGATAGAACAGTTTATATATTAGATAAAGATATGTACTATTATATGGCAA
TGGGAAACTTAGAATATAAAAGCGAAAATTATAATTCTGCAATAGATAATTATAAAAAAAGTTTAGAGATATCTACCAAA
AGAAAGTTAACCCAGGAGAAAATAAAAAATTTAAATAAGATATTAAATATATATGAAAAACAAGGAAATATAGAATCTTT
AAATGAGTATCAAAAGATGTTAATAAATGAATATAAAGAGAACAAAAGTATAAGAGATTCAGAGACTAGTTTCTATATAA
TTGATAAAGTATCAAACGAAAGTAAGCTATTTGAAAAAACTAAAAAAGAAATAAAATATTATAAAATATTATTTACCGTA
ATTTTAATTGCTATATTAGGGTCTACTTTTTTATACAACCGATTGAAGTATTTTAAAGCACAAAATTTACATGATGGTCT
TACAAATGTTTATAATAGAAAAAGTTTTGATATTATGTATGAAAAGTACAGAGAGAAAGATGATAATTTTGCACTTGTGA
TGATAGATATTGATAATTTCAAGCTCATAAATGATAATTATGGACATAAATTTGGTGACACTGTTATAAAGGGAATAACA
AATACCATTTGTGTTATGTTAGAACAAGATGATAAAGTCTTTAGGTACGGAGGAGAAGAATTTTCTGTATTAATAAGAAA
TAAATCTGGTGAGGAAGTAGCAGATATAATTGACAGTATAAGGGTTGCAATTGCAAATAAAAAGTGGAATGATGATGTGA
CTGTGACTATAAGTGCAGGTGTAGCTCATATTTCAGATAGCAAAGATGTACTAGAAGAAGCTGATAAAAATTTATATAAA
GCAAAACAACTTGGTAGAAATAAAGTAGTATATAAGTAA

Upstream 100 bases:

>100_bases
ATGTTGTAAATCATTTTGATATATTGTATTATTAATTATTAAGAGGTTATTTATATATGCAAGTTTTCATTCTACAATAT
ACAAAAGGAGGACTAAAATT

Downstream 100 bases:

>100_bases
TTATATACTATATAAATAAGAGGTATAAATATGAAACAATCAATAGCTATAGTAACTGATAAAATAACTAAACTATCATC
TTTCTTAGAAGAAAATATAC

Product: signaling protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 572; Mature: 572

Protein sequence:

>572_residues
MNFRLPKKRLPKKIIFICIILISIILFIKYDQNGLKEREIINKGKYMSESLVADKEYDEAKKVVKTSFESIPEKKYNKVY
NEVWDMLKTISYVPDGTKIVIDSLEKMRESDVKLSDECRFNIEKRLASVYIMDNNYSKAVDLTVKSIKLAEKLGNNYEKA
RLDVDLASIFLKIGGYETGEKLIKDSFKIDIDEGEKNGMVRLYAIINLAEIYVEEGEYDKAIEISSRIKDYKKFVNTDNY
NDFDIMASIMQSNAYVGKNNIQKAKTFLEKADYLIKSDRTVYILDKDMYYYMAMGNLEYKSENYNSAIDNYKKSLEISTK
RKLTQEKIKNLNKILNIYEKQGNIESLNEYQKMLINEYKENKSIRDSETSFYIIDKVSNESKLFEKTKKEIKYYKILFTV
ILIAILGSTFLYNRLKYFKAQNLHDGLTNVYNRKSFDIMYEKYREKDDNFALVMIDIDNFKLINDNYGHKFGDTVIKGIT
NTICVMLEQDDKVFRYGGEEFSVLIRNKSGEEVADIIDSIRVAIANKKWNDDVTVTISAGVAHISDSKDVLEEADKNLYK
AKQLGRNKVVYK

Sequences:

>Translated_572_residues
MNFRLPKKRLPKKIIFICIILISIILFIKYDQNGLKEREIINKGKYMSESLVADKEYDEAKKVVKTSFESIPEKKYNKVY
NEVWDMLKTISYVPDGTKIVIDSLEKMRESDVKLSDECRFNIEKRLASVYIMDNNYSKAVDLTVKSIKLAEKLGNNYEKA
RLDVDLASIFLKIGGYETGEKLIKDSFKIDIDEGEKNGMVRLYAIINLAEIYVEEGEYDKAIEISSRIKDYKKFVNTDNY
NDFDIMASIMQSNAYVGKNNIQKAKTFLEKADYLIKSDRTVYILDKDMYYYMAMGNLEYKSENYNSAIDNYKKSLEISTK
RKLTQEKIKNLNKILNIYEKQGNIESLNEYQKMLINEYKENKSIRDSETSFYIIDKVSNESKLFEKTKKEIKYYKILFTV
ILIAILGSTFLYNRLKYFKAQNLHDGLTNVYNRKSFDIMYEKYREKDDNFALVMIDIDNFKLINDNYGHKFGDTVIKGIT
NTICVMLEQDDKVFRYGGEEFSVLIRNKSGEEVADIIDSIRVAIANKKWNDDVTVTISAGVAHISDSKDVLEEADKNLYK
AKQLGRNKVVYK
>Mature_572_residues
MNFRLPKKRLPKKIIFICIILISIILFIKYDQNGLKEREIINKGKYMSESLVADKEYDEAKKVVKTSFESIPEKKYNKVY
NEVWDMLKTISYVPDGTKIVIDSLEKMRESDVKLSDECRFNIEKRLASVYIMDNNYSKAVDLTVKSIKLAEKLGNNYEKA
RLDVDLASIFLKIGGYETGEKLIKDSFKIDIDEGEKNGMVRLYAIINLAEIYVEEGEYDKAIEISSRIKDYKKFVNTDNY
NDFDIMASIMQSNAYVGKNNIQKAKTFLEKADYLIKSDRTVYILDKDMYYYMAMGNLEYKSENYNSAIDNYKKSLEISTK
RKLTQEKIKNLNKILNIYEKQGNIESLNEYQKMLINEYKENKSIRDSETSFYIIDKVSNESKLFEKTKKEIKYYKILFTV
ILIAILGSTFLYNRLKYFKAQNLHDGLTNVYNRKSFDIMYEKYREKDDNFALVMIDIDNFKLINDNYGHKFGDTVIKGIT
NTICVMLEQDDKVFRYGGEEFSVLIRNKSGEEVADIIDSIRVAIANKKWNDDVTVTISAGVAHISDSKDVLEEADKNLYK
AKQLGRNKVVYK

Specific function: Unknown

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI1786584, Length=193, Percent_Identity=32.1243523316062, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI87081881, Length=154, Percent_Identity=33.7662337662338, Blast_Score=96, Evalue=9e-21,
Organism=Escherichia coli, GI87082007, Length=168, Percent_Identity=34.5238095238095, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1787262, Length=181, Percent_Identity=30.939226519337, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1788381, Length=157, Percent_Identity=33.1210191082803, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1787816, Length=157, Percent_Identity=30.5732484076433, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI1787541, Length=152, Percent_Identity=33.5526315789474, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI145693134, Length=156, Percent_Identity=29.4871794871795, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1788085, Length=159, Percent_Identity=32.7044025157233, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1787056, Length=152, Percent_Identity=32.8947368421053, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787802, Length=159, Percent_Identity=32.0754716981132, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1788956, Length=159, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI87081977, Length=154, Percent_Identity=26.6233766233766, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR011620 [H]

Pfam domain/function: PF07694 5TM-5TMR_LYT; PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 66721; Mature: 66721

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION ; PS00962 RIBOSOMAL_S2_1 ; PS50887 GGDEF ; PS00636 DNAJ_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFRLPKKRLPKKIIFICIILISIILFIKYDQNGLKEREIINKGKYMSESLVADKEYDEA
CCCCCCHHHCCHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHCCCHHHHHHHCCCCHHHH
KKVVKTSFESIPEKKYNKVYNEVWDMLKTISYVPDGTKIVIDSLEKMRESDVKLSDECRF
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHH
NIEKRLASVYIMDNNYSKAVDLTVKSIKLAEKLGNNYEKARLDVDLASIFLKIGGYETGE
HHHHHEEEEEEEECCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHH
KLIKDSFKIDIDEGEKNGMVRLYAIINLAEIYVEEGEYDKAIEISSRIKDYKKFVNTDNY
HHHHCCCEEEECCCCCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC
NDFDIMASIMQSNAYVGKNNIQKAKTFLEKADYLIKSDRTVYILDKDMYYYMAMGNLEYK
CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEECCCEEEEEECCEEEEEEECCEEEC
SENYNSAIDNYKKSLEISTKRKLTQEKIKNLNKILNIYEKQGNIESLNEYQKMLINEYKE
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
NKSIRDSETSFYIIDKVSNESKLFEKTKKEIKYYKILFTVILIAILGSTFLYNRLKYFKA
CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNLHDGLTNVYNRKSFDIMYEKYREKDDNFALVMIDIDNFKLINDNYGHKFGDTVIKGIT
CCHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEEECCEEEECCCCCCHHHHHHHHHHH
NTICVMLEQDDKVFRYGGEEFSVLIRNKSGEEVADIIDSIRVAIANKKWNDDVTVTISAG
HHEEEEECCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECC
VAHISDSKDVLEEADKNLYKAKQLGRNKVVYK
EEECCCCHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNFRLPKKRLPKKIIFICIILISIILFIKYDQNGLKEREIINKGKYMSESLVADKEYDEA
CCCCCCHHHCCHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHCCCHHHHHHHCCCCHHHH
KKVVKTSFESIPEKKYNKVYNEVWDMLKTISYVPDGTKIVIDSLEKMRESDVKLSDECRF
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHH
NIEKRLASVYIMDNNYSKAVDLTVKSIKLAEKLGNNYEKARLDVDLASIFLKIGGYETGE
HHHHHEEEEEEEECCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHH
KLIKDSFKIDIDEGEKNGMVRLYAIINLAEIYVEEGEYDKAIEISSRIKDYKKFVNTDNY
HHHHCCCEEEECCCCCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC
NDFDIMASIMQSNAYVGKNNIQKAKTFLEKADYLIKSDRTVYILDKDMYYYMAMGNLEYK
CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEECCCEEEEEECCEEEEEEECCEEEC
SENYNSAIDNYKKSLEISTKRKLTQEKIKNLNKILNIYEKQGNIESLNEYQKMLINEYKE
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
NKSIRDSETSFYIIDKVSNESKLFEKTKKEIKYYKILFTVILIAILGSTFLYNRLKYFKA
CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNLHDGLTNVYNRKSFDIMYEKYREKDDNFALVMIDIDNFKLINDNYGHKFGDTVIKGIT
CCHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEEECCEEEECCCCCCHHHHHHHHHHH
NTICVMLEQDDKVFRYGGEEFSVLIRNKSGEEVADIIDSIRVAIANKKWNDDVTVTISAG
HHEEEEECCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECC
VAHISDSKDVLEEADKNLYKAKQLGRNKVVYK
EEECCCCHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]