Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is fabK

Identifier: 126698776

GI number: 126698776

Start: 1380393

End: 1381322

Strand: Direct

Name: fabK

Synonym: CD1180

Alternate gene names: NA

Gene position: 1380393-1381322 (Clockwise)

Preceding gene: 126698775

Following gene: 126698777

Centisome position: 32.18

GC content: 35.59

Gene sequence:

>930_bases
ATGAATAAAATTTGCAAAATATTAAATATAAAATACCCAGTTATCCAAGGGGGAATGGCATGGGTAGCTACTGCATCATT
AGCAAGTGCTGTATCTAATGCAGGAGGACTTGGCATAATAGCAGCAGGAAACGCACCAAAAGAAGCTATAAAGAAAGAAA
TTGTTGAGTGTAAAAAATTAACAGATAAACCTTTTGGAGTAAATGTAATGCTTATGTCGCCATTTGTTGATGATATAATT
GATTTGATTATAGAAGAAAAAGTTCAAGTTATTACTACTGGTGCTGGAAATCCTGCAAAGTATATGGATAGATTAAAGGA
AGCTGGAACAAAGGTTATTCCTGTAGTACCTACAATAGCTTTGGCACAAAGAATGGAAAAGCTAGGAGCTACAGCAGTAA
TAGCAGAAGGTACTGAAGGTGGAGGACATATAGGAGAACTTACTACTATGGTCTTAGTTCCACAAGTTGCTGATGCTGTA
AACATACCTGTAATAGCTGCTGGAGGAATTGTAGATGGTAGAGGAATTGCAGCATCATTTGCATTAGGTGCCAGTGCAGT
TCAAGTAGGAACTAGATTTATTTGCAGTGAAGAGTGTTCTGTCCATTCAAACTATAAAAACTTAGTACTAAAAGCAAAAG
ATAGAGATGCAATTGTAACAGGAAGAAGTACTGGTCATCCAGTAAGAACATTAAAAAATAAACTATCAAAAGAATTTTTA
AAGATGGAACAAAATGGAGCTACTCCTGAAGAATTGGATAAAAAAGGTACAGGAGCTTTAAGATTTGCAACAGTAGATGG
AGACATAGAAAAAGGTTCATTTATGGCAGGTCAAAGTGCTGCTATGGTAAAAGAAATAACACCTTGTAAGGAAATTATAG
AGGCTATGGTAAATCAAGCAAGAGAGATTATGCCAGCAATAGAACTGTAA

Upstream 100 bases:

>100_bases
ATCTAAAATGATTTAATTAACAAAATTAAACTTATACACAAAATAAAGTTGATTAATAATAAAAAGTTTACTTTTATGAT
TTCAAGTGAAGGAGAATTGT

Downstream 100 bases:

>100_bases
ATCAGGAGGAGCAAGATGGGAAAAGTTGCATTAGTATTCCCTGGTCAAGGAGCTCAATATGTAGGTATGGCCAAGGATTT
ATATGAAAATAATGCTGTTG

Product: trans-2-enoyl-ACP reductase

Products: NA

Alternate protein names: Nitroalkane oxidase [H]

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MNKICKILNIKYPVIQGGMAWVATASLASAVSNAGGLGIIAAGNAPKEAIKKEIVECKKLTDKPFGVNVMLMSPFVDDII
DLIIEEKVQVITTGAGNPAKYMDRLKEAGTKVIPVVPTIALAQRMEKLGATAVIAEGTEGGGHIGELTTMVLVPQVADAV
NIPVIAAGGIVDGRGIAASFALGASAVQVGTRFICSEECSVHSNYKNLVLKAKDRDAIVTGRSTGHPVRTLKNKLSKEFL
KMEQNGATPEELDKKGTGALRFATVDGDIEKGSFMAGQSAAMVKEITPCKEIIEAMVNQAREIMPAIEL

Sequences:

>Translated_309_residues
MNKICKILNIKYPVIQGGMAWVATASLASAVSNAGGLGIIAAGNAPKEAIKKEIVECKKLTDKPFGVNVMLMSPFVDDII
DLIIEEKVQVITTGAGNPAKYMDRLKEAGTKVIPVVPTIALAQRMEKLGATAVIAEGTEGGGHIGELTTMVLVPQVADAV
NIPVIAAGGIVDGRGIAASFALGASAVQVGTRFICSEECSVHSNYKNLVLKAKDRDAIVTGRSTGHPVRTLKNKLSKEFL
KMEQNGATPEELDKKGTGALRFATVDGDIEKGSFMAGQSAAMVKEITPCKEIIEAMVNQAREIMPAIEL
>Mature_309_residues
MNKICKILNIKYPVIQGGMAWVATASLASAVSNAGGLGIIAAGNAPKEAIKKEIVECKKLTDKPFGVNVMLMSPFVDDII
DLIIEEKVQVITTGAGNPAKYMDRLKEAGTKVIPVVPTIALAQRMEKLGATAVIAEGTEGGGHIGELTTMVLVPQVADAV
NIPVIAAGGIVDGRGIAASFALGASAVQVGTRFICSEECSVHSNYKNLVLKAKDRDAIVTGRSTGHPVRTLKNKLSKEFL
KMEQNGATPEELDKKGTGALRFATVDGDIEKGSFMAGQSAAMVKEITPCKEIIEAMVNQAREIMPAIEL

Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitronate monooxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004136
- InterPro:   IPR013785 [H]

Pfam domain/function: PF03060 NPD [H]

EC number: =1.13.12.16 [H]

Molecular weight: Translated: 32527; Mature: 32527

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKICKILNIKYPVIQGGMAWVATASLASAVSNAGGLGIIAAGNAPKEAIKKEIVECKKL
CCCHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH
TDKPFGVNVMLMSPFVDDIIDLIIEEKVQVITTGAGNPAKYMDRLKEAGTKVIPVVPTIA
CCCCCCEEEEEECHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCEEEEHHHHHH
LAQRMEKLGATAVIAEGTEGGGHIGELTTMVLVPQVADAVNIPVIAAGGIVDGRGIAASF
HHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHH
ALGASAVQVGTRFICSEECSVHSNYKNLVLKAKDRDAIVTGRSTGHPVRTLKNKLSKEFL
HHCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHH
KMEQNGATPEELDKKGTGALRFATVDGDIEKGSFMAGQSAAMVKEITPCKEIIEAMVNQA
HHHHCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
REIMPAIEL
HHHHHHCCC
>Mature Secondary Structure
MNKICKILNIKYPVIQGGMAWVATASLASAVSNAGGLGIIAAGNAPKEAIKKEIVECKKL
CCCHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH
TDKPFGVNVMLMSPFVDDIIDLIIEEKVQVITTGAGNPAKYMDRLKEAGTKVIPVVPTIA
CCCCCCEEEEEECHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCEEEEHHHHHH
LAQRMEKLGATAVIAEGTEGGGHIGELTTMVLVPQVADAVNIPVIAAGGIVDGRGIAASF
HHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHH
ALGASAVQVGTRFICSEECSVHSNYKNLVLKAKDRDAIVTGRSTGHPVRTLKNKLSKEFL
HHCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHH
KMEQNGATPEELDKKGTGALRFATVDGDIEKGSFMAGQSAAMVKEITPCKEIIEAMVNQA
HHHHCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
REIMPAIEL
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA