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The map label for this gene is rpmF

Identifier: 126698772

GI number: 126698772

Start: 1377299

End: 1377475

Strand: Direct

Name: rpmF

Synonym: CD1176A

Alternate gene names: 126698772

Gene position: 1377299-1377475 (Clockwise)

Preceding gene: 126698771

Following gene: 126698773

Centisome position: 32.1

GC content: 37.85

Gene sequence:

>177_bases
ATGGCAGTACCAAAGCGTAAAACGTCTAAATCAAACACAAAAATGAGAAGAGCAGCTAACTCAAAGATGGAAGCAACAGG
ATTTGTAAGTTGCCCACAATGTCATGAGCCAAAATTACCACATAGAGTGTGTCCAGACTGTGGATATTATAAAGGTAAAG
AAGTTGTGTCTAAGTAA

Upstream 100 bases:

>100_bases
TTCTTGCAGTGAAATTACAAACGATGAGGAATACATAGATCCTCGTTTTGCTAAATTAAAAGATTTATTTAATTAAATTT
TGACTAAGGAGGTGGCGTAA

Downstream 100 bases:

>100_bases
TAGCTTCTAAAAAGCATGTAGAGTATACTCTACATGTTTTTTTTGTACATATAAAAAAATAAGATGATTTACTAGAGAAA
ATAAGTGGATTTTATGCATA

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 58; Mature: 57

Protein sequence:

>58_residues
MAVPKRKTSKSNTKMRRAANSKMEATGFVSCPQCHEPKLPHRVCPDCGYYKGKEVVSK

Sequences:

>Translated_58_residues
MAVPKRKTSKSNTKMRRAANSKMEATGFVSCPQCHEPKLPHRVCPDCGYYKGKEVVSK
>Mature_57_residues
AVPKRKTSKSNTKMRRAANSKMEATGFVSCPQCHEPKLPHRVCPDCGYYKGKEVVSK

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL32_CLOD6 (Q18B38)

Other databases:

- EMBL:   AM180355
- RefSeq:   YP_001087669.1
- ProteinModelPortal:   Q18B38
- SMR:   Q18B38
- STRING:   Q18B38
- GeneID:   4916379
- GenomeReviews:   AM180355_GR
- KEGG:   cdf:CD1176A
- NMPDR:   fig|1496.1.peg.219
- eggNOG:   COG0333
- HOGENOM:   HBG728381
- OMA:   HRACRHC
- ProtClustDB:   PRK12286
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 6498; Mature: 6366

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.9 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
12.1 %Cys+Met (Translated Protein)
7.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
10.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPKRKTSKSNTKMRRAANSKMEATGFVSCPQCHEPKLPHRVCPDCGYYKGKEVVSK
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
>Mature Secondary Structure 
AVPKRKTSKSNTKMRRAANSKMEATGFVSCPQCHEPKLPHRVCPDCGYYKGKEVVSK
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA