| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698750
Identifier: 126698750
GI number: 126698750
Start: 1352970
End: 1353761
Strand: Direct
Name: 126698750
Synonym: CD1155
Alternate gene names: NA
Gene position: 1352970-1353761 (Clockwise)
Preceding gene: 126698749
Following gene: 126698751
Centisome position: 31.54
GC content: 24.24
Gene sequence:
>792_bases ATGAAACTAATAGATGAATATTTAGATAAACTATATAAAAAATGTGACAATAAAAGTACTATAGAATTAAAACAGGAAAT GAGATGCCATCTTATAGAATCTGCAAATGAATTTAAATTAGAAGGATTAGATGAAGAAGAAGCATGTAAAAAAGCAATTG AAAGATTTGATGATGGTGATGAAATGCAGTATGAATTATGTAATATAATAAAAGAACTATCTTTATCATTGGATAGGCAT AAATCAATTGTAATGGGGTTTAAAAAAGTATTAGGTTACATAAGTATAATTGCATTTTTAATTTCTGGATTTATGTGGTA TTACAATAATAGTTTACAACATAATATGTATAATTTAGGAAAAGAACTTGATGGAGAAATAAAGCAATTGGCAGAAAGAC ATGATATGACAAAGATTGGTGAATATAAGTTAGAACTTGAAAAAATACTTGATAAAGATAAGTATAGTAAAGTCAAAGCT CTTAGATTATATGTAATAGATATGAAAGATGGAAACACTAATTTAAGTTCTTCTGGATTGAATGCTAATATGGTATATGA GAGGGAAGCAGATTATAATAACATAAGTAATTTTATACAGCATTTAGGATATAATGGAAAAGATTTTTTAGACAAGAATG GGAATATAGTAAATCCAGATATTTTCTTAGAATATTTCTTTTATTTTGAATCGGAGATGTTAATTCCAGTAGCATTTGCA TTTGGATTATTATGTATAATAGCGTATTTTATATTAAGATTTAAAATTTCTTTAATAAAAAATAATAATTAA
Upstream 100 bases:
>100_bases TTTAACTAATGAAGGTAAAGATTTTTTAGAAATAAAGAAACAAGAATGGAGATTTATTAAAAAGGTTATGAATCAATTTT TGGGAGAGGTGGATTAATTT
Downstream 100 bases:
>100_bases ATAATTCACCAAATAATCTTAATTTGTAGAGTAAATAAGATGTTTCAAAATAAAATTTGAATCATCTTATTTTTTATTGT TTGTTATACTCTTTTCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MKLIDEYLDKLYKKCDNKSTIELKQEMRCHLIESANEFKLEGLDEEEACKKAIERFDDGDEMQYELCNIIKELSLSLDRH KSIVMGFKKVLGYISIIAFLISGFMWYYNNSLQHNMYNLGKELDGEIKQLAERHDMTKIGEYKLELEKILDKDKYSKVKA LRLYVIDMKDGNTNLSSSGLNANMVYEREADYNNISNFIQHLGYNGKDFLDKNGNIVNPDIFLEYFFYFESEMLIPVAFA FGLLCIIAYFILRFKISLIKNNN
Sequences:
>Translated_263_residues MKLIDEYLDKLYKKCDNKSTIELKQEMRCHLIESANEFKLEGLDEEEACKKAIERFDDGDEMQYELCNIIKELSLSLDRH KSIVMGFKKVLGYISIIAFLISGFMWYYNNSLQHNMYNLGKELDGEIKQLAERHDMTKIGEYKLELEKILDKDKYSKVKA LRLYVIDMKDGNTNLSSSGLNANMVYEREADYNNISNFIQHLGYNGKDFLDKNGNIVNPDIFLEYFFYFESEMLIPVAFA FGLLCIIAYFILRFKISLIKNNN >Mature_263_residues MKLIDEYLDKLYKKCDNKSTIELKQEMRCHLIESANEFKLEGLDEEEACKKAIERFDDGDEMQYELCNIIKELSLSLDRH KSIVMGFKKVLGYISIIAFLISGFMWYYNNSLQHNMYNLGKELDGEIKQLAERHDMTKIGEYKLELEKILDKDKYSKVKA LRLYVIDMKDGNTNLSSSGLNANMVYEREADYNNISNFIQHLGYNGKDFLDKNGNIVNPDIFLEYFFYFESEMLIPVAFA FGLLCIIAYFILRFKISLIKNNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30826; Mature: 30826
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIDEYLDKLYKKCDNKSTIELKQEMRCHLIESANEFKLEGLDEEEACKKAIERFDDGD CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC EMQYELCNIIKELSLSLDRHKSIVMGFKKVLGYISIIAFLISGFMWYYNNSLQHNMYNLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH KELDGEIKQLAERHDMTKIGEYKLELEKILDKDKYSKVKALRLYVIDMKDGNTNLSSSGL HHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHEEEEEEEEECCCCCCCCCCCC NANMVYEREADYNNISNFIQHLGYNGKDFLDKNGNIVNPDIFLEYFFYFESEMLIPVAFA CCCEEEECCCCHHHHHHHHHHCCCCCCHHHCCCCCEECHHHHHHHHHHHCCCHHHHHHHH FGLLCIIAYFILRFKISLIKNNN HHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKLIDEYLDKLYKKCDNKSTIELKQEMRCHLIESANEFKLEGLDEEEACKKAIERFDDGD CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC EMQYELCNIIKELSLSLDRHKSIVMGFKKVLGYISIIAFLISGFMWYYNNSLQHNMYNLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH KELDGEIKQLAERHDMTKIGEYKLELEKILDKDKYSKVKALRLYVIDMKDGNTNLSSSGL HHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHEEEEEEEEECCCCCCCCCCCC NANMVYEREADYNNISNFIQHLGYNGKDFLDKNGNIVNPDIFLEYFFYFESEMLIPVAFA CCCEEEECCCCHHHHHHHHHHCCCCCCHHHCCCCCEECHHHHHHHHHHHCCCHHHHHHHH FGLLCIIAYFILRFKISLIKNNN HHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA