| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is ywzG [H]
Identifier: 126698749
GI number: 126698749
Start: 1352637
End: 1352966
Strand: Direct
Name: ywzG [H]
Synonym: CD1154
Alternate gene names: 126698749
Gene position: 1352637-1352966 (Clockwise)
Preceding gene: 126698748
Following gene: 126698750
Centisome position: 31.53
GC content: 24.55
Gene sequence:
>330_bases ATGCAGTTAAATAAAGAAGTGTTAAAAGGTTATATCGATATATTAATTGTTTCTATATTAGAAAAGAAAGATTGTTATGG ATATGAAATTGCAAAGCAAGTAAGAGAAAGAAGTGAGTTTGAATTAAAAGAAGGAACAATGTATCTTGCACTTAAAAGAA TGGAATCTAAAAATTTAATTAAATCTTATTATAGCAATGAACAAAGTTCAGGTGGAAGAAGAAAATATTATAATTTAACT AATGAAGGTAAAGATTTTTTAGAAATAAAGAAACAAGAATGGAGATTTATTAAAAAGGTTATGAATCAATTTTTGGGAGA GGTGGATTAA
Upstream 100 bases:
>100_bases TGTAGAATATAAACCTTGCATTATAGAGTACTATGTATTATTATAGTAAATATAAGTACTATACATTATAGAGTAGTAGG TGAAAAGGCGGTGGTACATA
Downstream 100 bases:
>100_bases TTTATGAAACTAATAGATGAATATTTAGATAAACTATATAAAAAATGTGACAATAAAAGTACTATAGAATTAAAACAGGA AATGAGATGCCATCTTATAG
Product: PadR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MQLNKEVLKGYIDILIVSILEKKDCYGYEIAKQVRERSEFELKEGTMYLALKRMESKNLIKSYYSNEQSSGGRRKYYNLT NEGKDFLEIKKQEWRFIKKVMNQFLGEVD
Sequences:
>Translated_109_residues MQLNKEVLKGYIDILIVSILEKKDCYGYEIAKQVRERSEFELKEGTMYLALKRMESKNLIKSYYSNEQSSGGRRKYYNLT NEGKDFLEIKKQEWRFIKKVMNQFLGEVD >Mature_109_residues MQLNKEVLKGYIDILIVSILEKKDCYGYEIAKQVRERSEFELKEGTMYLALKRMESKNLIKSYYSNEQSSGGRRKYYNLT NEGKDFLEIKKQEWRFIKKVMNQFLGEVD
Specific function: Unknown
COG id: COG1695
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005149 - InterPro: IPR011991 [H]
Pfam domain/function: PF03551 PadR [H]
EC number: NA
Molecular weight: Translated: 13049; Mature: 13049
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLNKEVLKGYIDILIVSILEKKDCYGYEIAKQVRERSEFELKEGTMYLALKRMESKNLI CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KSYYSNEQSSGGRRKYYNLTNEGKDFLEIKKQEWRFIKKVMNQFLGEVD HHHHCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQLNKEVLKGYIDILIVSILEKKDCYGYEIAKQVRERSEFELKEGTMYLALKRMESKNLI CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KSYYSNEQSSGGRRKYYNLTNEGKDFLEIKKQEWRFIKKVMNQFLGEVD HHHHCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]