Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is mgsA

Identifier: 126698748

GI number: 126698748

Start: 1351740

End: 1352153

Strand: Direct

Name: mgsA

Synonym: CD1153

Alternate gene names: 126698748

Gene position: 1351740-1352153 (Clockwise)

Preceding gene: 126698747

Following gene: 126698749

Centisome position: 31.51

GC content: 30.92

Gene sequence:

>414_bases
ATGAATATAGCATTAGTAGCACATGACCAAATGAAAAACACTATGGTCGGATTTTGTATAGGTTATGAATCAATTTTAAA
AAAGTATGGACTATATGCAACTGGAACTACAGGAAAAAGAATAATGGATGAAACTGAATTAAATATAAATAGATTAGCAT
CTGGTCCTTTAGGTGGAGACCAACAAATAGGTTCTTTAATAGTAACACAAGAAATAGATTTAGTTATTTTTTTAAGAGAC
CCATTGACATCTCAGGCTCATGAAACAGATATACAAGCGTTAATAAGACTTTGTGATGTTTATCATGTTCCAATAGCTAC
AAATCTAGCTTCAGCAGAAATATTTATAAAAGCTCTTGATAGAGGAGAACTATCATGGAGAGAAGTTAGAAAAAGCAAAA
GTCAACGTATTTAA

Upstream 100 bases:

>100_bases
TTAGCAAACTTAGGATTAGTACTAAATGTGTGTATGAGAAGAAAGAAAATAAATTTCTAAATTTAAATACATCTAAACAT
AAATTGAGGAGATTAGATAT

Downstream 100 bases:

>100_bases
AAAATATTAATATTACAGTCTAAAGAAACAGATATATAAGTGTTTAATGCCCTAGTCTTTCTGTTGGAATAAACCTAGTA
CCTGTAGAAATCTTATGAAA

Product: methylglyoxal synthase

Products: NA

Alternate protein names: MGS

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MNIALVAHDQMKNTMVGFCIGYESILKKYGLYATGTTGKRIMDETELNINRLASGPLGGDQQIGSLIVTQEIDLVIFLRD
PLTSQAHETDIQALIRLCDVYHVPIATNLASAEIFIKALDRGELSWREVRKSKSQRI

Sequences:

>Translated_137_residues
MNIALVAHDQMKNTMVGFCIGYESILKKYGLYATGTTGKRIMDETELNINRLASGPLGGDQQIGSLIVTQEIDLVIFLRD
PLTSQAHETDIQALIRLCDVYHVPIATNLASAEIFIKALDRGELSWREVRKSKSQRI
>Mature_137_residues
MNIALVAHDQMKNTMVGFCIGYESILKKYGLYATGTTGKRIMDETELNINRLASGPLGGDQQIGSLIVTQEIDLVIFLRD
PLTSQAHETDIQALIRLCDVYHVPIATNLASAEIFIKALDRGELSWREVRKSKSQRI

Specific function: Unknown

COG id: COG1803

COG function: function code G; Methylglyoxal synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methylglyoxal synthase family

Homologues:

Organism=Escherichia coli, GI87081809, Length=117, Percent_Identity=45.2991452991453, Blast_Score=120, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MGSA_CLOD6 (Q18B16)

Other databases:

- EMBL:   AM180355
- RefSeq:   YP_001087645.1
- ProteinModelPortal:   Q18B16
- SMR:   Q18B16
- STRING:   Q18B16
- GeneID:   4914589
- GenomeReviews:   AM180355_GR
- KEGG:   cdf:CD1153
- NMPDR:   fig|1496.1.peg.243
- eggNOG:   COG1803
- HOGENOM:   HBG298005
- OMA:   EPQPHDP
- ProtClustDB:   CLSK2534709
- HAMAP:   MF_00549
- InterPro:   IPR004363
- InterPro:   IPR018148
- InterPro:   IPR011607
- Gene3D:   G3DSA:3.40.50.1380
- PIRSF:   PIRSF006614
- SMART:   SM00851
- TIGRFAMs:   TIGR00160

Pfam domain/function: PF02142 MGS; SSF52335 MGS-like_dom

EC number: =4.2.3.3

Molecular weight: Translated: 15277; Mature: 15277

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS01335 METHYLGLYOXAL_SYNTH

Important sites: ACT_SITE 60-60

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIALVAHDQMKNTMVGFCIGYESILKKYGLYATGTTGKRIMDETELNINRLASGPLGGD
CCEEEEECCHHHHHHHHHHCCHHHHHHHHCCEEECCCCCHHHHHHCCCHHHHCCCCCCCC
QQIGSLIVTQEIDLVIFLRDPLTSQAHETDIQALIRLCDVYHVPIATNLASAEIFIKALD
HHHCEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHEEECC
RGELSWREVRKSKSQRI
CCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MNIALVAHDQMKNTMVGFCIGYESILKKYGLYATGTTGKRIMDETELNINRLASGPLGGD
CCEEEEECCHHHHHHHHHHCCHHHHHHHHCCEEECCCCCHHHHHHCCCHHHHCCCCCCCC
QQIGSLIVTQEIDLVIFLRDPLTSQAHETDIQALIRLCDVYHVPIATNLASAEIFIKALD
HHHCEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHEEECC
RGELSWREVRKSKSQRI
CCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA