| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698742
Identifier: 126698742
GI number: 126698742
Start: 1345102
End: 1345590
Strand: Direct
Name: 126698742
Synonym: CD1147
Alternate gene names: NA
Gene position: 1345102-1345590 (Clockwise)
Preceding gene: 126698741
Following gene: 126698743
Centisome position: 31.35
GC content: 26.58
Gene sequence:
>489_bases ATGAAAAAAGTTTTACTTTGTCTGTTGGGGATTGTGCTTATGACTATAGAAAATAGTATAACAAATTATATAGATATTTT TGGCATAAGCTTTAATTTAGTTCTTATATATGTAACCATAATCTCTCTTTATTTAGATGAATTAGAAGGTGGGATTATAG CAGTAATAATAGGGCTTATTAAAGACATAACCGTTGGTGGAATTTTTGGTGTAAATGCATTAATTTTGTTTATTATTGCA TATGCAATTGGATACATGAGAGATCAGCTATATAAAGGTAGTTATATTATTACTTTCGTTTTAATTTTTATAGGCAGTTT AATTGATTCAATTGTCAATATAGGTACATCTAGTATAATTTATCAAAGCTACAACATATCAACACTTTTTGTAAAAGGTC TACTAGTAGCACCAATAGTGAATAGTTTAATTGGTTTAGTAATATATCGCTTATCTAAAAGAGCAGTTTTAAAACTTAAA GAAGATTAG
Upstream 100 bases:
>100_bases CATTAAAATATGTAGTTGTAAAACCTTATGTTGATTTTAAGAATATAAATGACGTTGTAGTCATAGAACCAAGAAATATA GGATAAAGGGGATAAAAACA
Downstream 100 bases:
>100_bases TTGGTGATTTCATGGAAGAAAATAAACAAGTTGATAGACTAAAAATAATTAAGATAGTCATGGGCGTGATATTTTTAGCT ATTTTAGTAAAAATAATCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MKKVLLCLLGIVLMTIENSITNYIDIFGISFNLVLIYVTIISLYLDELEGGIIAVIIGLIKDITVGGIFGVNALILFIIA YAIGYMRDQLYKGSYIITFVLIFIGSLIDSIVNIGTSSIIYQSYNISTLFVKGLLVAPIVNSLIGLVIYRLSKRAVLKLK ED
Sequences:
>Translated_162_residues MKKVLLCLLGIVLMTIENSITNYIDIFGISFNLVLIYVTIISLYLDELEGGIIAVIIGLIKDITVGGIFGVNALILFIIA YAIGYMRDQLYKGSYIITFVLIFIGSLIDSIVNIGTSSIIYQSYNISTLFVKGLLVAPIVNSLIGLVIYRLSKRAVLKLK ED >Mature_162_residues MKKVLLCLLGIVLMTIENSITNYIDIFGISFNLVLIYVTIISLYLDELEGGIIAVIIGLIKDITVGGIFGVNALILFIIA YAIGYMRDQLYKGSYIITFVLIFIGSLIDSIVNIGTSSIIYQSYNISTLFVKGLLVAPIVNSLIGLVIYRLSKRAVLKLK ED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17846; Mature: 17846
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVLLCLLGIVLMTIENSITNYIDIFGISFNLVLIYVTIISLYLDELEGGIIAVIIGLI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH KDITVGGIFGVNALILFIIAYAIGYMRDQLYKGSYIITFVLIFIGSLIDSIVNIGTSSII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHE YQSYNISTLFVKGLLVAPIVNSLIGLVIYRLSKRAVLKLKED EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC >Mature Secondary Structure MKKVLLCLLGIVLMTIENSITNYIDIFGISFNLVLIYVTIISLYLDELEGGIIAVIIGLI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH KDITVGGIFGVNALILFIIAYAIGYMRDQLYKGSYIITFVLIFIGSLIDSIVNIGTSSII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHE YQSYNISTLFVKGLLVAPIVNSLIGLVIYRLSKRAVLKLKED EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA