| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698718
Identifier: 126698718
GI number: 126698718
Start: 1323349
End: 1324218
Strand: Direct
Name: 126698718
Synonym: CD1125
Alternate gene names: NA
Gene position: 1323349-1324218 (Clockwise)
Preceding gene: 126698717
Following gene: 126698719
Centisome position: 30.85
GC content: 28.62
Gene sequence:
>870_bases ATGGATTATAAAACAATCATATTAAATAGAAAGTCTGTTAGAGAATATAAGAACACAGATATTAAAGAAGAATATCTTAG TGAAATTAAGAAATACTCAGAATCTTGTAAGAAACTAGTTCCAGAAATAGATGTTGATGTAAGAATTATGAATAGAAGTG AAGTTTTTAATAATTTAGATAAAGTAGCAGGGTACAAAGGAAATATGATAGATTCTCCAAGTTATATTATAATATTATCT GACATAAAAGATAATTACATTGAAAATTCAGGGTACATAGGAGAAAGTATAATCTTTAAAGTAACAGAACTTGGAATTGG TTCTTGTTGGGTTACTTTTGAAGATGGAAAAAAGGTAAAAGAAAAACTTGGAATTAATTCAGATAAAGAGGTAACAGGAA TTATAGCTATTGGATATGGAGAAAATGTAAGTAATGCTAAAGTATTAAATGCTACAAAAACTGGGCAAAATTATTCAAAA TCTGATATGCAAGTTGTAACAGATAAGGGGTCTACTAGACTAGGTGTAGAAGATGTTGTTTATATGAACGAATGGGGAAA TGTTGCAAGTATAGAAATCTTAGAAGAAAGAGCACTTCTTGATGCATTTCACTATGCAAGATTAGCTCCATCTACATTAA ATAGACAACCATGGAGATTTATAGTTGATGGAGGCACTGTAGTTTTAGCTGTTAGAAAAGATGGTCATACTAATTTATAT GAAGAAAAAATAGACATTGGTATAGTTATGCTTTATTTTGCAACAATAATAAGTGCAACTATGTTTGATTTAAAATGGAA TTTAGGTACTCCAGACAAAGATTATAAAGTGCCAGAAGACTATAAGATAGTAGGATATTGTAATATATAA
Upstream 100 bases:
>100_bases TAATTACAAAATTGTAATCTTTATTTATTAAATAAATGAGTAAAATAATATATTAATGGGTATATAATTAAGACAATACT AGTTTGGGGAGGATAAAATT
Downstream 100 bases:
>100_bases GATAGTGTAATACTTAATTTAACTACACTTAAATTAATTTTTATAAAAAGTTCAATAACATTTTATAATATAATGTTATT GAACTTTTTTATTGTATAAT
Product: nitroreductase family protein
Products: NA
Alternate protein names: Nitroreductase Family Protein
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MDYKTIILNRKSVREYKNTDIKEEYLSEIKKYSESCKKLVPEIDVDVRIMNRSEVFNNLDKVAGYKGNMIDSPSYIIILS DIKDNYIENSGYIGESIIFKVTELGIGSCWVTFEDGKKVKEKLGINSDKEVTGIIAIGYGENVSNAKVLNATKTGQNYSK SDMQVVTDKGSTRLGVEDVVYMNEWGNVASIEILEERALLDAFHYARLAPSTLNRQPWRFIVDGGTVVLAVRKDGHTNLY EEKIDIGIVMLYFATIISATMFDLKWNLGTPDKDYKVPEDYKIVGYCNI
Sequences:
>Translated_289_residues MDYKTIILNRKSVREYKNTDIKEEYLSEIKKYSESCKKLVPEIDVDVRIMNRSEVFNNLDKVAGYKGNMIDSPSYIIILS DIKDNYIENSGYIGESIIFKVTELGIGSCWVTFEDGKKVKEKLGINSDKEVTGIIAIGYGENVSNAKVLNATKTGQNYSK SDMQVVTDKGSTRLGVEDVVYMNEWGNVASIEILEERALLDAFHYARLAPSTLNRQPWRFIVDGGTVVLAVRKDGHTNLY EEKIDIGIVMLYFATIISATMFDLKWNLGTPDKDYKVPEDYKIVGYCNI >Mature_289_residues MDYKTIILNRKSVREYKNTDIKEEYLSEIKKYSESCKKLVPEIDVDVRIMNRSEVFNNLDKVAGYKGNMIDSPSYIIILS DIKDNYIENSGYIGESIIFKVTELGIGSCWVTFEDGKKVKEKLGINSDKEVTGIIAIGYGENVSNAKVLNATKTGQNYSK SDMQVVTDKGSTRLGVEDVVYMNEWGNVASIEILEERALLDAFHYARLAPSTLNRQPWRFIVDGGTVVLAVRKDGHTNLY EEKIDIGIVMLYFATIISATMFDLKWNLGTPDKDYKVPEDYKIVGYCNI
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32730; Mature: 32730
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYKTIILNRKSVREYKNTDIKEEYLSEIKKYSESCKKLVPEIDVDVRIMNRSEVFNNLD CCCEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHH KVAGYKGNMIDSPSYIIILSDIKDNYIENSGYIGESIIFKVTELGIGSCWVTFEDGKKVK HHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHEEEEEECCCCEEEEEECCCHHHH EKLGINSDKEVTGIIAIGYGENVSNAKVLNATKTGQNYSKSDMQVVTDKGSTRLGVEDVV HHHCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCEECHHHEE YMNEWGNVASIEILEERALLDAFHYARLAPSTLNRQPWRFIVDGGTVVLAVRKDGHTNLY EEECCCCEEEEEHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEECCEEEEEEECCCCCCHH EEKIDIGIVMLYFATIISATMFDLKWNLGTPDKDYKVPEDYKIVGYCNI HHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEEEEECC >Mature Secondary Structure MDYKTIILNRKSVREYKNTDIKEEYLSEIKKYSESCKKLVPEIDVDVRIMNRSEVFNNLD CCCEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHH KVAGYKGNMIDSPSYIIILSDIKDNYIENSGYIGESIIFKVTELGIGSCWVTFEDGKKVK HHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHEEEEEECCCCEEEEEECCCHHHH EKLGINSDKEVTGIIAIGYGENVSNAKVLNATKTGQNYSKSDMQVVTDKGSTRLGVEDVV HHHCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCEECHHHEE YMNEWGNVASIEILEERALLDAFHYARLAPSTLNRQPWRFIVDGGTVVLAVRKDGHTNLY EEECCCCEEEEEHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEECCEEEEEEECCCCCCHH EEKIDIGIVMLYFATIISATMFDLKWNLGTPDKDYKVPEDYKIVGYCNI HHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA