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The map label for this gene is yisV [H]

Identifier: 126698657

GI number: 126698657

Start: 1263850

End: 1265304

Strand: Direct

Name: yisV [H]

Synonym: CD1070

Alternate gene names: 126698657

Gene position: 1263850-1265304 (Clockwise)

Preceding gene: 126698654

Following gene: 126698658

Centisome position: 29.46

GC content: 25.57

Gene sequence:

>1455_bases
GTGATAAATTTGGAAAAATACAGAATAGATTTAAATGAGAAAAAATCAACTAAATATATACAGATATTTAATCATATAAA
AGAATTGATAATAAATAAAGAGTTAGTAGAACATGAAAAATTGCCTCCAATAAGAAAACTATCAAATTTTTTACAAGTAA
ATAACACTACTATAGTTAAGGTATACGAGCTTTTAGAAAATGAAGGATATGTATATAAAATTATAGGGAGTGGTACTTTT
GTATCAAGTTTAAATTCTTATAAAAGCGGTATAGATAACAGGAAAAATAAGATTATTGTGCAAAGAGAAGATTTAATTCA
TTTTGACAATGGGAATCCATCTAATGATATGTTTCCTATCGATTCATTTAAAAATGCTGTAAATATGGCATTATCTAAAG
ATGGTAGTTCAATATTTGAATATGATGAAGGTCTTGGCTCTGAAGAATTAAGAGAAAAAATGGTAGAGTATCTAAGTGAT
GGAAATATAAAAACTACTAAGGAAAATATTCAAATAATATCAGGTGCTCAACAAGGTATAGATATAGTTTGTAAAGGACT
TATAAGTTATTCAGATGTTGTTTTTATGGAAGAACCTTCTTACAATGGAGCAATTGAAGTGTTTAAAAGTAGAGGTGCAA
AAATAATATCTATACCTATGTTAGATGATGGAATTGATATAGGTATTTTAAAATTAAAGTTGGAAAAAATAAAACCAAGA
CTTATATACATTATGCCTAATTTTCAAAATCCAACTGGAATATCTTACTCAACATATAAAAAAAAGAAATTGATAGAATT
GGCAGAAGAACATGATTTTTATATAATAGAAGATGATTTTATAAGTGATTTTGTTTTTGAATCAAAGGACAATAGAACAA
TTAGAAGTTATGATGATAAAAATAGAGTAGTATATATAAAAAGCTTTTCAAAAATACTTATGCCAGGTCTTAGGATAGGA
ATTGTAGAAATGCCAAATGAGTTGTTAAAAAAAGTTTTATGGGCTAAATATTCATCAGATATATCAACACCAGGTTTAAT
TCAAAAATCAATGTATTACTATATGAATAATTTTGATTGGAAGAATTATTTGAGTCATATAGAGAAGATATATACTGATA
AGTATAAATTGGCAAAAAACTTGATTAATGACAAATTGAGTGGTAAATTAAAAGTTAGAAAATCTTGTGGAGGAATAAAC
TTTTTTTTAGAATTACCAAGAGGATATACATCTCAAGCATTTACAAATTTTATGTTAAACAAAGGAGTGTCAATGCTTCC
AGGGACTTATTTTTTTGACAATCTAGTGGATGATAGATTCTTTAGGATAAATATAGCTCGTCCAAGCATGGAAGAACTAG
AAAAGGGAATATCTATAATAAGTGATAATATAGATGAGTTTTTTTGTGAATATAAAAACAAGTTAGATATAAAAAGCAAT
AAATTATTTTATTAA

Upstream 100 bases:

>100_bases
AAATATTTCCCCTTTTTATAAAAATTTTGGTATTATATATACATACTAAATAATATCAAATATACATAAAAGCATCAATA
AAATATAAATACAATGAGCG

Downstream 100 bases:

>100_bases
ATAAATAGAGGTTTTTTAGGAGGAAAAAATGTTTGACAAGAAGAAATTAGATAGGATTAATGAATTAGCAAAGAAAAATA
AAGAGGGAATCCTTTCTGCT

Product: aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MINLEKYRIDLNEKKSTKYIQIFNHIKELIINKELVEHEKLPPIRKLSNFLQVNNTTIVKVYELLENEGYVYKIIGSGTF
VSSLNSYKSGIDNRKNKIIVQREDLIHFDNGNPSNDMFPIDSFKNAVNMALSKDGSSIFEYDEGLGSEELREKMVEYLSD
GNIKTTKENIQIISGAQQGIDIVCKGLISYSDVVFMEEPSYNGAIEVFKSRGAKIISIPMLDDGIDIGILKLKLEKIKPR
LIYIMPNFQNPTGISYSTYKKKKLIELAEEHDFYIIEDDFISDFVFESKDNRTIRSYDDKNRVVYIKSFSKILMPGLRIG
IVEMPNELLKKVLWAKYSSDISTPGLIQKSMYYYMNNFDWKNYLSHIEKIYTDKYKLAKNLINDKLSGKLKVRKSCGGIN
FFLELPRGYTSQAFTNFMLNKGVSMLPGTYFFDNLVDDRFFRINIARPSMEELEKGISIISDNIDEFFCEYKNKLDIKSN
KLFY

Sequences:

>Translated_484_residues
MINLEKYRIDLNEKKSTKYIQIFNHIKELIINKELVEHEKLPPIRKLSNFLQVNNTTIVKVYELLENEGYVYKIIGSGTF
VSSLNSYKSGIDNRKNKIIVQREDLIHFDNGNPSNDMFPIDSFKNAVNMALSKDGSSIFEYDEGLGSEELREKMVEYLSD
GNIKTTKENIQIISGAQQGIDIVCKGLISYSDVVFMEEPSYNGAIEVFKSRGAKIISIPMLDDGIDIGILKLKLEKIKPR
LIYIMPNFQNPTGISYSTYKKKKLIELAEEHDFYIIEDDFISDFVFESKDNRTIRSYDDKNRVVYIKSFSKILMPGLRIG
IVEMPNELLKKVLWAKYSSDISTPGLIQKSMYYYMNNFDWKNYLSHIEKIYTDKYKLAKNLINDKLSGKLKVRKSCGGIN
FFLELPRGYTSQAFTNFMLNKGVSMLPGTYFFDNLVDDRFFRINIARPSMEELEKGISIISDNIDEFFCEYKNKLDIKSN
KLFY
>Mature_484_residues
MINLEKYRIDLNEKKSTKYIQIFNHIKELIINKELVEHEKLPPIRKLSNFLQVNNTTIVKVYELLENEGYVYKIIGSGTF
VSSLNSYKSGIDNRKNKIIVQREDLIHFDNGNPSNDMFPIDSFKNAVNMALSKDGSSIFEYDEGLGSEELREKMVEYLSD
GNIKTTKENIQIISGAQQGIDIVCKGLISYSDVVFMEEPSYNGAIEVFKSRGAKIISIPMLDDGIDIGILKLKLEKIKPR
LIYIMPNFQNPTGISYSTYKKKKLIELAEEHDFYIIEDDFISDFVFESKDNRTIRSYDDKNRVVYIKSFSKILMPGLRIG
IVEMPNELLKKVLWAKYSSDISTPGLIQKSMYYYMNNFDWKNYLSHIEKIYTDKYKLAKNLINDKLSGKLKVRKSCGGIN
FFLELPRGYTSQAFTNFMLNKGVSMLPGTYFFDNLVDDRFFRINIARPSMEELEKGISIISDNIDEFFCEYKNKLDIKSN
KLFY

Specific function: Unknown

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Homo sapiens, GI7705897, Length=425, Percent_Identity=23.7647058823529, Blast_Score=119, Evalue=7e-27,
Organism=Homo sapiens, GI33469970, Length=425, Percent_Identity=23.7647058823529, Blast_Score=119, Evalue=7e-27,
Organism=Escherichia coli, GI1787710, Length=471, Percent_Identity=23.5668789808917, Blast_Score=155, Evalue=5e-39,
Organism=Escherichia coli, GI1790797, Length=465, Percent_Identity=23.8709677419355, Blast_Score=151, Evalue=8e-38,
Organism=Saccharomyces cerevisiae, GI6321929, Length=303, Percent_Identity=26.0726072607261, Blast_Score=86, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6321236, Length=376, Percent_Identity=22.8723404255319, Blast_Score=85, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6321000, Length=426, Percent_Identity=23.0046948356808, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21356535, Length=401, Percent_Identity=23.9401496259352, Blast_Score=113, Evalue=3e-25,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR000524
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00155 Aminotran_1_2; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 56119; Mature: 56119

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINLEKYRIDLNEKKSTKYIQIFNHIKELIINKELVEHEKLPPIRKLSNFLQVNNTTIVK
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHH
VYELLENEGYVYKIIGSGTFVSSLNSYKSGIDNRKNKIIVQREDLIHFDNGNPSNDMFPI
HHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCEEEEEECCEEEECCCCCCCCCCCC
DSFKNAVNMALSKDGSSIFEYDEGLGSEELREKMVEYLSDGNIKTTKENIQIISGAQQGI
HHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCH
DIVCKGLISYSDVVFMEEPSYNGAIEVFKSRGAKIISIPMLDDGIDIGILKLKLEKIKPR
HHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCEEEEEEEECCCCCEEEEEEEEECCCCE
LIYIMPNFQNPTGISYSTYKKKKLIELAEEHDFYIIEDDFISDFVFESKDNRTIRSYDDK
EEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCCCCCEECCCCCC
NRVVYIKSFSKILMPGLRIGIVEMPNELLKKVLWAKYSSDISTPGLIQKSMYYYMNNFDW
CCEEEEECHHHHHCCCCEEEHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCH
KNYLSHIEKIYTDKYKLAKNLINDKLSGKLKVRKSCGGINFFLELPRGYTSQAFTNFMLN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHH
KGVSMLPGTYFFDNLVDDRFFRINIARPSMEELEKGISIISDNIDEFFCEYKNKLDIKSN
CCCHHCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC
KLFY
CCCC
>Mature Secondary Structure
MINLEKYRIDLNEKKSTKYIQIFNHIKELIINKELVEHEKLPPIRKLSNFLQVNNTTIVK
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHH
VYELLENEGYVYKIIGSGTFVSSLNSYKSGIDNRKNKIIVQREDLIHFDNGNPSNDMFPI
HHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCEEEEEECCEEEECCCCCCCCCCCC
DSFKNAVNMALSKDGSSIFEYDEGLGSEELREKMVEYLSDGNIKTTKENIQIISGAQQGI
HHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCH
DIVCKGLISYSDVVFMEEPSYNGAIEVFKSRGAKIISIPMLDDGIDIGILKLKLEKIKPR
HHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCEEEEEEEECCCCCEEEEEEEEECCCCE
LIYIMPNFQNPTGISYSTYKKKKLIELAEEHDFYIIEDDFISDFVFESKDNRTIRSYDDK
EEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCCCCCEECCCCCC
NRVVYIKSFSKILMPGLRIGIVEMPNELLKKVLWAKYSSDISTPGLIQKSMYYYMNNFDW
CCEEEEECHHHHHCCCCEEEHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCH
KNYLSHIEKIYTDKYKLAKNLINDKLSGKLKVRKSCGGINFFLELPRGYTSQAFTNFMLN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHH
KGVSMLPGTYFFDNLVDDRFFRINIARPSMEELEKGISIISDNIDEFFCEYKNKLDIKSN
CCCHHCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC
KLFY
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]