| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698654
Identifier: 126698654
GI number: 126698654
Start: 1260265
End: 1261482
Strand: Direct
Name: 126698654
Synonym: CD1067
Alternate gene names: NA
Gene position: 1260265-1261482 (Clockwise)
Preceding gene: 126698653
Following gene: 126698657
Centisome position: 29.38
GC content: 34.65
Gene sequence:
>1218_bases ATGCAAGATTATAAAAAAAATAAAAGAAGAATGATGAATCAGCCAATGTCTACAATGAATGAAGAAGAAGTGTATACAGA TGAAATAAATTCAGAAGACATGAGAGGTTTTAAAAAATCACACCATCATAATGGATGTAATACTGATAATAAGTGTGAGT GCCATGATGATTGCAATCCATGCAACCCATGTAATCCATGTAAACCTAACCCATGCAATCCATGCAAACCTAATCCATGT GATGACAATTGTGGATGCCATGACAATTGTAAATGTGATTGTGAACCATGTGAAATGGATTCAGATGAATGTTTTGAAAA CAAATGTGGACCAGAATGCTGTAATCCTATATCTCCAAGAAACTTCTCTGTATCAAATGCAGTGCCATTTGCAATAGAGG CTAATAGAATATTTGATACTATGCAATTCCAAACATTTACAGATGCAACAGGACCAAATGGAGAGCCATTAACTTTTGAA ACAGAAGTAGTAGAAGTATTTGGTTCAGTTCCAAGTGCAGGTCAAGCAAGTGTAACTATAGAAAAAATATGCTTAAGTAA TGATGGAATCGTTATAGACACAGGAATGACAACTTTAGAAGATTTCGATTTAGACCCATTAGGAGATATAGTAGGAAGAA ACTGTGAAACAACTTTTGAATTTGCAGTTTGTGGAGAAAGAAACTCTGAGTGCTGTAGACAAGGAAAAGGCAAATCAGTA GCTTATAAACAAAGAGGATTAACTGTAGCAGTTCGTAATTTAGTACTAGAGCTAAGAGGTAGATGTGGATGTACAGAGTT CGTTGCATTAGCTTTCCCAGCAGTTAGAGCAGGAGGTGGATGTAAGAGAAGAGTTGATTATGTAGAATTTACTTTTAACA CACTTTCAGCACCAATATGCTTGCCAGCTGACGGAAGAGCTGTTACTTTAAGACAAGAATATCAAACTAACTTAACTGTA GATTGTATAGGAAAATCTATATTAAAATTAGAATGCAACGAATGTTGTGAACCTTTCTATGAATTAATTATACCAAATGA TATAGATTTAGTACTTTGCTTACAAGAAACAGTTAGCACATTAATAAGTGAACAAATAGTAGTTTTAGCATCACCAAATC CAATCCAACCAAGACTTGTTGATACTTTCTCTAAAGTATGTGATTTTTCGCAATGTGGACCTAATCATGGAAGTGGAAAG CCAAGTTGCCACAGATAG
Upstream 100 bases:
>100_bases AAAAAGCAAGTAACAATTAAGATTATAAAAGCATAGTATTAATTAGGCTTCAAAAAGCCAAAGACTTAATAAGAATCGCT TACAGGGAGGGCAATGAAAA
Downstream 100 bases:
>100_bases ATAGGTAGATATATAGACAGTTTAAATTATAAATAAAAATCATCTAAGGAAGGCTACCAAAGTGTATAATTTACATTGGT AGCCTTCACGTTTTTATAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MQDYKKNKRRMMNQPMSTMNEEEVYTDEINSEDMRGFKKSHHHNGCNTDNKCECHDDCNPCNPCNPCKPNPCNPCKPNPC DDNCGCHDNCKCDCEPCEMDSDECFENKCGPECCNPISPRNFSVSNAVPFAIEANRIFDTMQFQTFTDATGPNGEPLTFE TEVVEVFGSVPSAGQASVTIEKICLSNDGIVIDTGMTTLEDFDLDPLGDIVGRNCETTFEFAVCGERNSECCRQGKGKSV AYKQRGLTVAVRNLVLELRGRCGCTEFVALAFPAVRAGGGCKRRVDYVEFTFNTLSAPICLPADGRAVTLRQEYQTNLTV DCIGKSILKLECNECCEPFYELIIPNDIDLVLCLQETVSTLISEQIVVLASPNPIQPRLVDTFSKVCDFSQCGPNHGSGK PSCHR
Sequences:
>Translated_405_residues MQDYKKNKRRMMNQPMSTMNEEEVYTDEINSEDMRGFKKSHHHNGCNTDNKCECHDDCNPCNPCNPCKPNPCNPCKPNPC DDNCGCHDNCKCDCEPCEMDSDECFENKCGPECCNPISPRNFSVSNAVPFAIEANRIFDTMQFQTFTDATGPNGEPLTFE TEVVEVFGSVPSAGQASVTIEKICLSNDGIVIDTGMTTLEDFDLDPLGDIVGRNCETTFEFAVCGERNSECCRQGKGKSV AYKQRGLTVAVRNLVLELRGRCGCTEFVALAFPAVRAGGGCKRRVDYVEFTFNTLSAPICLPADGRAVTLRQEYQTNLTV DCIGKSILKLECNECCEPFYELIIPNDIDLVLCLQETVSTLISEQIVVLASPNPIQPRLVDTFSKVCDFSQCGPNHGSGK PSCHR >Mature_405_residues MQDYKKNKRRMMNQPMSTMNEEEVYTDEINSEDMRGFKKSHHHNGCNTDNKCECHDDCNPCNPCNPCKPNPCNPCKPNPC DDNCGCHDNCKCDCEPCEMDSDECFENKCGPECCNPISPRNFSVSNAVPFAIEANRIFDTMQFQTFTDATGPNGEPLTFE TEVVEVFGSVPSAGQASVTIEKICLSNDGIVIDTGMTTLEDFDLDPLGDIVGRNCETTFEFAVCGERNSECCRQGKGKSV AYKQRGLTVAVRNLVLELRGRCGCTEFVALAFPAVRAGGGCKRRVDYVEFTFNTLSAPICLPADGRAVTLRQEYQTNLTV DCIGKSILKLECNECCEPFYELIIPNDIDLVLCLQETVSTLISEQIVVLASPNPIQPRLVDTFSKVCDFSQCGPNHGSGK PSCHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44766; Mature: 44766
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 11.4 %Cys+Met (Translated Protein) 9.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 11.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDYKKNKRRMMNQPMSTMNEEEVYTDEINSEDMRGFKKSHHHNGCNTDNKCECHDDCNP CCCHHHHHHHHHHCCHHHCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC CNPCNPCKPNPCNPCKPNPCDDNCGCHDNCKCDCEPCEMDSDECFENKCGPECCNPISPR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHCCCCCCC NFSVSNAVPFAIEANRIFDTMQFQTFTDATGPNGEPLTFETEVVEVFGSVPSAGQASVTI CEECCCCCCEEEEHHHHHHHHHHEEECCCCCCCCCCEEEHHHHHHHHCCCCCCCCCEEEE EKICLSNDGIVIDTGMTTLEDFDLDPLGDIVGRNCETTFEFAVCGERNSECCRQGKGKSV EEEEECCCCEEEECCCCCHHCCCCCHHHHHHCCCCCCEEEEEEECCCCHHHHHCCCCCCE AYKQRGLTVAVRNLVLELRGRCGCTEFVALAFPAVRAGGGCKRRVDYVEFTFNTLSAPIC EHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHCCEEEEEEHHHCCCCEE LPADGRAVTLRQEYQTNLTVDCIGKSILKLECNECCEPFYELIIPNDIDLVLCLQETVST ECCCCCEEEEEHHHCCCCCHHHHCCHHHEECHHHHHHHHHHHHCCCCCCEEEEHHHHHHH LISEQIVVLASPNPIQPRLVDTFSKVCDFSQCGPNHGSGKPSCHR HHCCCEEEEECCCCCCCHHHHHHHHHHCHHHCCCCCCCCCCCCCC >Mature Secondary Structure MQDYKKNKRRMMNQPMSTMNEEEVYTDEINSEDMRGFKKSHHHNGCNTDNKCECHDDCNP CCCHHHHHHHHHHCCHHHCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC CNPCNPCKPNPCNPCKPNPCDDNCGCHDNCKCDCEPCEMDSDECFENKCGPECCNPISPR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHCCCCCCC NFSVSNAVPFAIEANRIFDTMQFQTFTDATGPNGEPLTFETEVVEVFGSVPSAGQASVTI CEECCCCCCEEEEHHHHHHHHHHEEECCCCCCCCCCEEEHHHHHHHHCCCCCCCCCEEEE EKICLSNDGIVIDTGMTTLEDFDLDPLGDIVGRNCETTFEFAVCGERNSECCRQGKGKSV EEEEECCCCEEEECCCCCHHCCCCCHHHHHHCCCCCCEEEEEEECCCCHHHHHCCCCCCE AYKQRGLTVAVRNLVLELRGRCGCTEFVALAFPAVRAGGGCKRRVDYVEFTFNTLSAPIC EHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHCCEEEEEEHHHCCCCEE LPADGRAVTLRQEYQTNLTVDCIGKSILKLECNECCEPFYELIIPNDIDLVLCLQETVST ECCCCCEEEEEHHHCCCCCHHHHCCHHHEECHHHHHHHHHHHHCCCCCCEEEEHHHHHHH LISEQIVVLASPNPIQPRLVDTFSKVCDFSQCGPNHGSGKPSCHR HHCCCEEEEECCCCCCCHHHHHHHHHHCHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA