| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698526
Identifier: 126698526
GI number: 126698526
Start: 1115979
End: 1117472
Strand: Direct
Name: 126698526
Synonym: CD0946
Alternate gene names: NA
Gene position: 1115979-1117472 (Clockwise)
Preceding gene: 126698525
Following gene: 126698527
Centisome position: 26.01
GC content: 29.38
Gene sequence:
>1494_bases ATGAAACATAAAGATTATTGGAGGAAGAGATTTGAACAATTAGAAGAAGCTCAGAATAATAAAAGTATAAAATATTATCT TGAATTAGAAAAACAATATAAACTAGCAATGTCTAATATAGAAAGAGATATACTTATATGGTATAACAGATTCACTGAAA ATGAGGGAATATCTTTATTGGAAGCTAAGAAACTGCTAAATACAAGAGAACTAGAAGAGTTTAAATGGAGTGTAGAAGAA TATATTAAATATGGTAAAGAAAATGCTATAAATCAAAAGTGGATGAAAGAGTTAGAAAATGCTAGTGCAAGAGTTCATAT AACAAGGCTTGAAGCTTTAAAACTGCAAATACAGCAACAAGTAGAAGTTTTATATGGAAATGAACTTGATGGTATTGATA AACTAATGAGAGATATTTATACAAGTGGATACTATCATACAGCTTTTAATGTTCAACAAGGAGTAAACGTTGGTTGGAGT TTAATGAGTCTTGATACTAACAGAATAAATAAAGTTATTTCTAAGCCTTGGACTAGTGATGGATTAAACTTCAGTGAAAG GATTTGGGGTAAGCATAGACCTGCTTTAGTAAATGAATTACATACTAAGCTAACTCAATCAATTATTAGAGGTGAAAATC CAAAGAAGCTAGTAAATGACTTTGCTAAGAGATTTAAGGTATCTAAGTCACAAGCTAAGAACTTAATAATGACTGAATCA GCTTTCTTTGCATCAGCTTCAAGAAAAGATTGTTTTAATGATTTAGATGTAGAGAAATATGAGATTATTGCTACATTAGA TTTAAGAACTTCAAATATATGCAGAGAGTTAGATGGAAAAATATTTGATATGAAAGATTATCAAGTTGGAATAACAGCTC CACCATTTCATTGTCGTTGTAGGACAACAACAGCTCCTTGGTTCGAGGATGAAGAAGGCTATAGAGCAGCAAGAGGAGAA GATGGAAAAACATATTATGTACCATCTAGTATGAAGTATAATGAGTGGTATGAGAAGTATGTTAAAAATAATAGTAAACA AACTGGTGCAAAATATACTAAAGGTGATATCGAGTGGAATATAAGAAGAGAAGAAGAAGCAGAACTATATTACGATAATA TTAGAAATAGAAAAGATGATATTTCCAAAATATCAAAGAATACAAATTGGTCAGAAAAAAGTATAGGTCAAATTAAAAAT CATATTTTCTACAATACTCATATAATGAGAGATGGAACTAGACGTATGTTGGATTCTGACTATAGTATGTCAGTTGCTTG GCAAAGACTTATAAATGGTACATACGAAGATATTGATATTCTCTTATTAAAACATGAATACCTTGAAAGTATATTTGAGA AAAAGTATAATATAAGTAACTTAGAAGCCCATAGAATGACTGAGAAAAAGCATGATTGGTATAAAGAATTAATTAAACAG AAAGGAGAGTTTGAAGAAGATGATTGTCTTAATGAACTTATTAGAAAAGAATAA
Upstream 100 bases:
>100_bases GTCGAGGATGTTAATGACGAACTTGAAAGACTTAAAAAACAGGAAGATACTCAAAAAGAGTATGATGATTTAATTCCTAA TAATCAAGATGGTGTTATAG
Downstream 100 bases:
>100_bases TGAATATGTTATATATAGTTATGGATATGAAGAAAATAAGCTTGATGGAAGAATAAAAATATATTTAGATGATTTTTATA ATTATGAAATAATAAAAGAG
Product: phage minor head protein
Products: NA
Alternate protein names: SPP1 Family Phage Head Morphogenesis Protein; Prophage Head Protein; Phage Head Morphogenesis Protein SPP1 Gp7 Family; NAD+-Asparagine ADP-Ribosyltransferase; Phage Mu Protein F Like Protein; Phage Minor Head Protein; SPP1 Gp7 Family Phage Head Morphogenesis Protein; Prophage Minor Head Protein; Minor Head Protein; Phage Head Morphogenesis Protein SPP1 Gp7 Family
Number of amino acids: Translated: 497; Mature: 497
Protein sequence:
>497_residues MKHKDYWRKRFEQLEEAQNNKSIKYYLELEKQYKLAMSNIERDILIWYNRFTENEGISLLEAKKLLNTRELEEFKWSVEE YIKYGKENAINQKWMKELENASARVHITRLEALKLQIQQQVEVLYGNELDGIDKLMRDIYTSGYYHTAFNVQQGVNVGWS LMSLDTNRINKVISKPWTSDGLNFSERIWGKHRPALVNELHTKLTQSIIRGENPKKLVNDFAKRFKVSKSQAKNLIMTES AFFASASRKDCFNDLDVEKYEIIATLDLRTSNICRELDGKIFDMKDYQVGITAPPFHCRCRTTTAPWFEDEEGYRAARGE DGKTYYVPSSMKYNEWYEKYVKNNSKQTGAKYTKGDIEWNIRREEEAELYYDNIRNRKDDISKISKNTNWSEKSIGQIKN HIFYNTHIMRDGTRRMLDSDYSMSVAWQRLINGTYEDIDILLLKHEYLESIFEKKYNISNLEAHRMTEKKHDWYKELIKQ KGEFEEDDCLNELIRKE
Sequences:
>Translated_497_residues MKHKDYWRKRFEQLEEAQNNKSIKYYLELEKQYKLAMSNIERDILIWYNRFTENEGISLLEAKKLLNTRELEEFKWSVEE YIKYGKENAINQKWMKELENASARVHITRLEALKLQIQQQVEVLYGNELDGIDKLMRDIYTSGYYHTAFNVQQGVNVGWS LMSLDTNRINKVISKPWTSDGLNFSERIWGKHRPALVNELHTKLTQSIIRGENPKKLVNDFAKRFKVSKSQAKNLIMTES AFFASASRKDCFNDLDVEKYEIIATLDLRTSNICRELDGKIFDMKDYQVGITAPPFHCRCRTTTAPWFEDEEGYRAARGE DGKTYYVPSSMKYNEWYEKYVKNNSKQTGAKYTKGDIEWNIRREEEAELYYDNIRNRKDDISKISKNTNWSEKSIGQIKN HIFYNTHIMRDGTRRMLDSDYSMSVAWQRLINGTYEDIDILLLKHEYLESIFEKKYNISNLEAHRMTEKKHDWYKELIKQ KGEFEEDDCLNELIRKE >Mature_497_residues MKHKDYWRKRFEQLEEAQNNKSIKYYLELEKQYKLAMSNIERDILIWYNRFTENEGISLLEAKKLLNTRELEEFKWSVEE YIKYGKENAINQKWMKELENASARVHITRLEALKLQIQQQVEVLYGNELDGIDKLMRDIYTSGYYHTAFNVQQGVNVGWS LMSLDTNRINKVISKPWTSDGLNFSERIWGKHRPALVNELHTKLTQSIIRGENPKKLVNDFAKRFKVSKSQAKNLIMTES AFFASASRKDCFNDLDVEKYEIIATLDLRTSNICRELDGKIFDMKDYQVGITAPPFHCRCRTTTAPWFEDEEGYRAARGE DGKTYYVPSSMKYNEWYEKYVKNNSKQTGAKYTKGDIEWNIRREEEAELYYDNIRNRKDDISKISKNTNWSEKSIGQIKN HIFYNTHIMRDGTRRMLDSDYSMSVAWQRLINGTYEDIDILLLKHEYLESIFEKKYNISNLEAHRMTEKKHDWYKELIKQ KGEFEEDDCLNELIRKE
Specific function: Unknown
COG id: COG5585
COG function: function code T; NAD+--asparagine ADP-ribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59243; Mature: 59243
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHKDYWRKRFEQLEEAQNNKSIKYYLELEKQYKLAMSNIERDILIWYNRFTENEGISLL CCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHCCCCEEEEEEHHCCCCCCHHH EAKKLLNTRELEEFKWSVEEYIKYGKENAINQKWMKELENASARVHITRLEALKLQIQQQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHH VEVLYGNELDGIDKLMRDIYTSGYYHTAFNVQQGVNVGWSLMSLDTNRINKVISKPWTSD HHHHCCCCCCHHHHHHHHHHHCCEEEEEECHHHCCCCCEEEEECCHHHHHHHHCCCCCCC GLNFSERIWGKHRPALVNELHTKLTQSIIRGENPKKLVNDFAKRFKVSKSQAKNLIMTES CCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHCCEEEECH AFFASASRKDCFNDLDVEKYEIIATLDLRTSNICRELDGKIFDMKDYQVGITAPPFHCRC HHHHCCCHHHHCCCCCCCEEEEEEEEECCHHHHHHHHCCCEEECCCCEEECCCCCCEEEE RTTTAPWFEDEEGYRAARGEDGKTYYVPSSMKYNEWYEKYVKNNSKQTGAKYTKGDIEWN ECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEE IRREEEAELYYDNIRNRKDDISKISKNTNWSEKSIGQIKNHIFYNTHIMRDGTRRMLDSD ECCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHEEEEEEEECCCHHHHHCCC YSMSVAWQRLINGTYEDIDILLLKHEYLESIFEKKYNISNLEAHRMTEKKHDWYKELIKQ CHHHHHHHHHHCCCCCCHHEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH KGEFEEDDCLNELIRKE CCCCCHHHHHHHHHHCC >Mature Secondary Structure MKHKDYWRKRFEQLEEAQNNKSIKYYLELEKQYKLAMSNIERDILIWYNRFTENEGISLL CCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHCCCCEEEEEEHHCCCCCCHHH EAKKLLNTRELEEFKWSVEEYIKYGKENAINQKWMKELENASARVHITRLEALKLQIQQQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHH VEVLYGNELDGIDKLMRDIYTSGYYHTAFNVQQGVNVGWSLMSLDTNRINKVISKPWTSD HHHHCCCCCCHHHHHHHHHHHCCEEEEEECHHHCCCCCEEEEECCHHHHHHHHCCCCCCC GLNFSERIWGKHRPALVNELHTKLTQSIIRGENPKKLVNDFAKRFKVSKSQAKNLIMTES CCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHCCEEEECH AFFASASRKDCFNDLDVEKYEIIATLDLRTSNICRELDGKIFDMKDYQVGITAPPFHCRC HHHHCCCHHHHCCCCCCCEEEEEEEEECCHHHHHHHHCCCEEECCCCEEECCCCCCEEEE RTTTAPWFEDEEGYRAARGEDGKTYYVPSSMKYNEWYEKYVKNNSKQTGAKYTKGDIEWN ECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEE IRREEEAELYYDNIRNRKDDISKISKNTNWSEKSIGQIKNHIFYNTHIMRDGTRRMLDSD ECCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHEEEEEEEECCCHHHHHCCC YSMSVAWQRLINGTYEDIDILLLKHEYLESIFEKKYNISNLEAHRMTEKKHDWYKELIKQ CHHHHHHHHHHCCCCCCHHEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH KGEFEEDDCLNELIRKE CCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA