Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698525

Identifier: 126698525

GI number: 126698525

Start: 1114550

End: 1115989

Strand: Direct

Name: 126698525

Synonym: CD0945

Alternate gene names: NA

Gene position: 1114550-1115989 (Clockwise)

Preceding gene: 126698524

Following gene: 126698526

Centisome position: 25.98

GC content: 28.54

Gene sequence:

>1440_bases
GTGTTAAATATTTATATAAGTGAAACAGATTTAATAAAAGTTCAGTTAAAAAAAGAGAGCACCTTTAACCTAGTAAAAGT
CATAGAGCATTATATTTTAAAACATAGACCAGAGAAATATAAACAAGGAGAAGAATACTATTATGGTAATACTGATGTAA
ACAATAAGAGAAGATATTATCTCTTAGATGGAGCTAAGGTTGATGATTTTACTAAGGTTAATAATAAAGCAATTAACAAC
TACCATAAGCTTTTAGTTGACCAAAAAGTGGGCTATAGTGTTGGAAATCCAATCGTATTTAATGCAGATGATGATAATCT
CACTAAGCTTTTAAATGACTTACTAGGAGAAGAGTTTGACGATACAATAACAGAACTATATCTCAATGCTAGTAATAAAG
GGGTTGAATGGTTACATCCATATATTAATAGAAAAGGTGAGTTTAAATATGTAATAATTCCAGCTGAAGAAGCAATTCCT
ATTTGGGATAGTAAAAGACAGAGGGAATTAGTTGCATTTATTAGGTTTTATTATATTGAAGATATAGATGGAAATAAAAT
AAAAAGAGTTGAGTACTACACAGAAAATGATGTAACTTACTTTGTTGAAAGAGGTAATGGTTTTGTTCAAGAATTTTTAT
ATGATGAATATGGAAAAATGACTGATATACAAGAAGGTCATTTTAGAATAAATAACAAAGAACAGGGTTGGGGTAAAGTT
CCATTTATACCTTTTAAAAATAATGAAAAGTGTGTCTCAGATTTAACTTTCTATAAATCATTAATAGATATATATGACAA
TAATATTTCTACACTAGCAGATAACTTAGATGAAATACAAGAGGTTATTTATGTATTAAAAGAATATCCAGGAACAAGTC
TACAAGAGTTTATAGATAATATAAGATACTATAAATCAATTAAAGTAGATGGTGGAGGTGGAGTTGATAAACTAGAGATA
AATATACCAGTTGAAGCTAAAAAGGAGCTTCTTGATAGATTGGAAAAGAATATAATTATCTTTGGTCAAGGAGTTAATCC
AGAATCTCAAAACACAGGTGACAAATCGGGTGTAGCACTTAAATTTTTATATTCACTACTTGACTTAAAATGTTCTAAGA
CTGAAAAGAAGTTTAAAAAAGCAATTAGAGAGCTTTTATGGTTTGTGTGTGAGTATTTAAAGATAAGTGGTAGTAAGAGC
TATGATTATAAAACAGTTCAAATTACTTTTAATCACTCTATGATAATAAATGAAGCTGAAAAGATAGATATGGCAGCTAA
ATCAACTGGAATTGTATCAGATGAAACTATTGTTTCTAACCATCCTTGGGTCGAGGATGTTAATGACGAACTTGAAAGAC
TTAAAAAACAGGAAGATACTCAAAAAGAGTATGATGATTTAATTCCTAATAATCAAGATGGTGTTATAGATGAAACATAA

Upstream 100 bases:

>100_bases
ATGAACCAGTTGAGTTTATGGATGATGCAATGGCTGCGCTTAGATATTCTATAGATAATAAGCTTAAAAATAATGGAATA
AGCTTCTTAAAGTAAAGGAG

Downstream 100 bases:

>100_bases
AGATTATTGGAGGAAGAGATTTGAACAATTAGAAGAAGCTCAGAATAATAAAAGTATAAAATATTATCTTGAATTAGAAA
AACAATATAAACTAGCAATG

Product: phage portal protein

Products: NA

Alternate protein names: Phage Portal Protein SPP1 Family; SPP1 Family Phage Portal Protein; Phage Portal Protein; Portal; Phage Related Protein; Serine Protein Kinase; Phage Protein; Phage Portal Protein SPP1 Gp6-Like

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MLNIYISETDLIKVQLKKESTFNLVKVIEHYILKHRPEKYKQGEEYYYGNTDVNNKRRYYLLDGAKVDDFTKVNNKAINN
YHKLLVDQKVGYSVGNPIVFNADDDNLTKLLNDLLGEEFDDTITELYLNASNKGVEWLHPYINRKGEFKYVIIPAEEAIP
IWDSKRQRELVAFIRFYYIEDIDGNKIKRVEYYTENDVTYFVERGNGFVQEFLYDEYGKMTDIQEGHFRINNKEQGWGKV
PFIPFKNNEKCVSDLTFYKSLIDIYDNNISTLADNLDEIQEVIYVLKEYPGTSLQEFIDNIRYYKSIKVDGGGGVDKLEI
NIPVEAKKELLDRLEKNIIIFGQGVNPESQNTGDKSGVALKFLYSLLDLKCSKTEKKFKKAIRELLWFVCEYLKISGSKS
YDYKTVQITFNHSMIINEAEKIDMAAKSTGIVSDETIVSNHPWVEDVNDELERLKKQEDTQKEYDDLIPNNQDGVIDET

Sequences:

>Translated_479_residues
MLNIYISETDLIKVQLKKESTFNLVKVIEHYILKHRPEKYKQGEEYYYGNTDVNNKRRYYLLDGAKVDDFTKVNNKAINN
YHKLLVDQKVGYSVGNPIVFNADDDNLTKLLNDLLGEEFDDTITELYLNASNKGVEWLHPYINRKGEFKYVIIPAEEAIP
IWDSKRQRELVAFIRFYYIEDIDGNKIKRVEYYTENDVTYFVERGNGFVQEFLYDEYGKMTDIQEGHFRINNKEQGWGKV
PFIPFKNNEKCVSDLTFYKSLIDIYDNNISTLADNLDEIQEVIYVLKEYPGTSLQEFIDNIRYYKSIKVDGGGGVDKLEI
NIPVEAKKELLDRLEKNIIIFGQGVNPESQNTGDKSGVALKFLYSLLDLKCSKTEKKFKKAIRELLWFVCEYLKISGSKS
YDYKTVQITFNHSMIINEAEKIDMAAKSTGIVSDETIVSNHPWVEDVNDELERLKKQEDTQKEYDDLIPNNQDGVIDET
>Mature_479_residues
MLNIYISETDLIKVQLKKESTFNLVKVIEHYILKHRPEKYKQGEEYYYGNTDVNNKRRYYLLDGAKVDDFTKVNNKAINN
YHKLLVDQKVGYSVGNPIVFNADDDNLTKLLNDLLGEEFDDTITELYLNASNKGVEWLHPYINRKGEFKYVIIPAEEAIP
IWDSKRQRELVAFIRFYYIEDIDGNKIKRVEYYTENDVTYFVERGNGFVQEFLYDEYGKMTDIQEGHFRINNKEQGWGKV
PFIPFKNNEKCVSDLTFYKSLIDIYDNNISTLADNLDEIQEVIYVLKEYPGTSLQEFIDNIRYYKSIKVDGGGGVDKLEI
NIPVEAKKELLDRLEKNIIIFGQGVNPESQNTGDKSGVALKFLYSLLDLKCSKTEKKFKKAIRELLWFVCEYLKISGSKS
YDYKTVQITFNHSMIINEAEKIDMAAKSTGIVSDETIVSNHPWVEDVNDELERLKKQEDTQKEYDDLIPNNQDGVIDET

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55843; Mature: 55843

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNIYISETDLIKVQLKKESTFNLVKVIEHYILKHRPEKYKQGEEYYYGNTDVNNKRRYY
CEEEEEECCEEEEEEEECCCHHHHHHHHHHHHHHCCCHHHCCCCCEEECCCCCCCCEEEE
LLDGAKVDDFTKVNNKAINNYHKLLVDQKVGYSVGNPIVFNADDDNLTKLLNDLLGEEFD
EECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHCCHHH
DTITELYLNASNKGVEWLHPYINRKGEFKYVIIPAEEAIPIWDSKRQRELVAFIRFYYIE
HHHHHHEECCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHEE
DIDGNKIKRVEYYTENDVTYFVERGNGFVQEFLYDEYGKMTDIQEGHFRINNKEQGWGKV
CCCCCEEEEEEEEECCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCC
PFIPFKNNEKCVSDLTFYKSLIDIYDNNISTLADNLDEIQEVIYVLKEYPGTSLQEFIDN
CEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IRYYKSIKVDGGGGVDKLEINIPVEAKKELLDRLEKNIIIFGQGVNPESQNTGDKSGVAL
HHHHEEEEECCCCCEEEEEEECCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHH
KFLYSLLDLKCSKTEKKFKKAIRELLWFVCEYLKISGSKSYDYKTVQITFNHSMIINEAE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCEEEECCHH
KIDMAAKSTGIVSDETIVSNHPWVEDVNDELERLKKQEDTQKEYDDLIPNNQDGVIDET
HHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLNIYISETDLIKVQLKKESTFNLVKVIEHYILKHRPEKYKQGEEYYYGNTDVNNKRRYY
CEEEEEECCEEEEEEEECCCHHHHHHHHHHHHHHCCCHHHCCCCCEEECCCCCCCCEEEE
LLDGAKVDDFTKVNNKAINNYHKLLVDQKVGYSVGNPIVFNADDDNLTKLLNDLLGEEFD
EECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHCCHHH
DTITELYLNASNKGVEWLHPYINRKGEFKYVIIPAEEAIPIWDSKRQRELVAFIRFYYIE
HHHHHHEECCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHEE
DIDGNKIKRVEYYTENDVTYFVERGNGFVQEFLYDEYGKMTDIQEGHFRINNKEQGWGKV
CCCCCEEEEEEEEECCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCC
PFIPFKNNEKCVSDLTFYKSLIDIYDNNISTLADNLDEIQEVIYVLKEYPGTSLQEFIDN
CEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IRYYKSIKVDGGGGVDKLEINIPVEAKKELLDRLEKNIIIFGQGVNPESQNTGDKSGVAL
HHHHEEEEECCCCCEEEEEEECCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHH
KFLYSLLDLKCSKTEKKFKKAIRELLWFVCEYLKISGSKSYDYKTVQITFNHSMIINEAE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCEEEECCHH
KIDMAAKSTGIVSDETIVSNHPWVEDVNDELERLKKQEDTQKEYDDLIPNNQDGVIDET
HHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA