| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698517
Identifier: 126698517
GI number: 126698517
Start: 1109618
End: 1110106
Strand: Direct
Name: 126698517
Synonym: CD0938
Alternate gene names: NA
Gene position: 1109618-1110106 (Clockwise)
Preceding gene: 126698516
Following gene: 126698518
Centisome position: 25.86
GC content: 24.95
Gene sequence:
>489_bases ATGGATAATAATATTAATAAAAAAGAACTATTTAAAAAAGTAGAAGGTAGACTACATCATTATAAATTTTTAAGTGCAGA AATTAAAAATCTTGAATTAGATATAGAAAGTAGAGAAAATGAGATATTTGGGTGTAAGGCTGTTGGATATGATGAAAAAG TAAGTCCAACATATGCTTTTAATTCAAGTGTGGAGAATGAGATTATAAAAAAAGAAAGAGATATTACTAGATTGAAAAAA CTGAAAAAAGATAAGGAAATTGAAAAGAAGAAAATAGAAAATGCACTTACATGTTTAGATATAAGAGAAGAACATTTTTT TAAACTGTTTTATAATAGCAGAATGAAAAATAGCATGGTTTATATATCCTTAGAGATGAACTCAGATAGAAAAACATGTA GATGTGTGAGGGAAAGATTAGTGTATAAAATTATGGATATGCTTTATCCAAGAATTAAGGAAAATGAACTACCATTATTT AAAAATTAG
Upstream 100 bases:
>100_bases CTGTTAATAAAAAGAAAAAAGGAGTGCTTTCACACTCCACTTGTCAAAAATATAAAGCTTTTATCCAAGATTATTATAAC ATAAACAGGAGTGTGGAAGT
Downstream 100 bases:
>100_bases AAAATTCCCCAGTTTTTCCCCAGAAATTCCCACTTTATTCCCTACTTTCTCCCCTTTTTGATTAAAAAAGCATGAGATAA TAGTATTGTGGAAATAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MDNNINKKELFKKVEGRLHHYKFLSAEIKNLELDIESRENEIFGCKAVGYDEKVSPTYAFNSSVENEIIKKERDITRLKK LKKDKEIEKKKIENALTCLDIREEHFFKLFYNSRMKNSMVYISLEMNSDRKTCRCVRERLVYKIMDMLYPRIKENELPLF KN
Sequences:
>Translated_162_residues MDNNINKKELFKKVEGRLHHYKFLSAEIKNLELDIESRENEIFGCKAVGYDEKVSPTYAFNSSVENEIIKKERDITRLKK LKKDKEIEKKKIENALTCLDIREEHFFKLFYNSRMKNSMVYISLEMNSDRKTCRCVRERLVYKIMDMLYPRIKENELPLF KN >Mature_162_residues MDNNINKKELFKKVEGRLHHYKFLSAEIKNLELDIESRENEIFGCKAVGYDEKVSPTYAFNSSVENEIIKKERDITRLKK LKKDKEIEKKKIENALTCLDIREEHFFKLFYNSRMKNSMVYISLEMNSDRKTCRCVRERLVYKIMDMLYPRIKENELPLF KN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19527; Mature: 19527
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNNINKKELFKKVEGRLHHYKFLSAEIKNLELDIESRENEIFGCKAVGYDEKVSPTYAF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEECCCCCCCCCCEEE NSSVENEIIKKERDITRLKKLKKDKEIEKKKIENALTCLDIREEHFFKLFYNSRMKNSMV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE YISLEMNSDRKTCRCVRERLVYKIMDMLYPRIKENELPLFKN EEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MDNNINKKELFKKVEGRLHHYKFLSAEIKNLELDIESRENEIFGCKAVGYDEKVSPTYAF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEECCCCCCCCCCEEE NSSVENEIIKKERDITRLKKLKKDKEIEKKKIENALTCLDIREEHFFKLFYNSRMKNSMV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE YISLEMNSDRKTCRCVRERLVYKIMDMLYPRIKENELPLFKN EEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA