Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698516

Identifier: 126698516

GI number: 126698516

Start: 1108799

End: 1109524

Strand: Direct

Name: 126698516

Synonym: CD0937

Alternate gene names: NA

Gene position: 1108799-1109524 (Clockwise)

Preceding gene: 126698515

Following gene: 126698517

Centisome position: 25.84

GC content: 27.0

Gene sequence:

>726_bases
ATGAATGAGATTATGACAAATGAAAATTTAAGAGTTGTAGCAGATGATTTAGTTACAGTTTATGAAACTGATACAGGAGA
GAAAATAGTTTTTGCAAGAGAACTACATAATAACTTAGAAGTTAAGAGACAGTTTATAGACTGGATTGAAGATAGAATTA
AACAATATGGATTTAAGGAAAATGAGGATTATTCAGTTTTTCACAAAAATATGAAAAACTCAACTGGTGGGAGACCTTCA
AAAGAATATGTATTGAAGCTTGATGTAGCAAAAGAACTTGCTATGGTACAAAACAATAATAAAGGAAGAGAAATAAGAAG
ATATTTTATAAGATTAGAAAAGTTGCTCAATAGAACCTTATCAAATTCACAGCTTAGTCAAATTAATACTATTGTGAATG
AATCATTACTTAAGATGGAAGTTAAACATAATATCCAAATGGAGCAACTTAAAAAAGAGTGTTCAGAATATTATAGACCA
ACCTCTAAAACTAAATATGATATATCTTCTTATATAAAAGAAAGACTAGGTATATCAAAAGTTAATGAAGAATTTGAATT
AGTTAAGAAAAGAACTCTATTGGTATTAGGTGCTGACAAATGGGAGGATATCCCGAAAGATGTATTACTTAATTCATTAA
ACTTAATAGATGAATCAATTAGAATTATAAAATCTGAAAGAAAGACAAATCAGATTAGTTTCTTTGAAAAAGATAATTTC
TGTTAA

Upstream 100 bases:

>100_bases
ATGATACACAGATTGTTGAGGTTGTAGCTAGTAAATATTATAGTGACAAACCAAGAGTTGAAGTTATGATAGAGGATATT
ATCTAAGGAGGACTATAAAT

Downstream 100 bases:

>100_bases
TAAAAAGAAAAAAGGAGTGCTTTCACACTCCACTTGTCAAAAATATAAAGCTTTTATCCAAGATTATTATAACATAAACA
GGAGTGTGGAAGTATGGATA

Product: phage anti-repressor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MNEIMTNENLRVVADDLVTVYETDTGEKIVFARELHNNLEVKRQFIDWIEDRIKQYGFKENEDYSVFHKNMKNSTGGRPS
KEYVLKLDVAKELAMVQNNNKGREIRRYFIRLEKLLNRTLSNSQLSQINTIVNESLLKMEVKHNIQMEQLKKECSEYYRP
TSKTKYDISSYIKERLGISKVNEEFELVKKRTLLVLGADKWEDIPKDVLLNSLNLIDESIRIIKSERKTNQISFFEKDNF
C

Sequences:

>Translated_241_residues
MNEIMTNENLRVVADDLVTVYETDTGEKIVFARELHNNLEVKRQFIDWIEDRIKQYGFKENEDYSVFHKNMKNSTGGRPS
KEYVLKLDVAKELAMVQNNNKGREIRRYFIRLEKLLNRTLSNSQLSQINTIVNESLLKMEVKHNIQMEQLKKECSEYYRP
TSKTKYDISSYIKERLGISKVNEEFELVKKRTLLVLGADKWEDIPKDVLLNSLNLIDESIRIIKSERKTNQISFFEKDNF
C
>Mature_241_residues
MNEIMTNENLRVVADDLVTVYETDTGEKIVFARELHNNLEVKRQFIDWIEDRIKQYGFKENEDYSVFHKNMKNSTGGRPS
KEYVLKLDVAKELAMVQNNNKGREIRRYFIRLEKLLNRTLSNSQLSQINTIVNESLLKMEVKHNIQMEQLKKECSEYYRP
TSKTKYDISSYIKERLGISKVNEEFELVKKRTLLVLGADKWEDIPKDVLLNSLNLIDESIRIIKSERKTNQISFFEKDNF
C

Specific function: Unknown

COG id: COG3561

COG function: function code K; Phage anti-repressor protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013557
- InterPro:   IPR018876 [H]

Pfam domain/function: PF08346 AntA; PF10548 P22_AR_C [H]

EC number: NA

Molecular weight: Translated: 28542; Mature: 28542

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEIMTNENLRVVADDLVTVYETDTGEKIVFARELHNNLEVKRQFIDWIEDRIKQYGFKE
CCCCCCCCCCEEEHHHHEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NEDYSVFHKNMKNSTGGRPSKEYVLKLDVAKELAMVQNNNKGREIRRYFIRLEKLLNRTL
CCCHHHHHHHHCCCCCCCCCHHHEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
SNSQLSQINTIVNESLLKMEVKHNIQMEQLKKECSEYYRPTSKTKYDISSYIKERLGISK
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHH
VNEEFELVKKRTLLVLGADKWEDIPKDVLLNSLNLIDESIRIIKSERKTNQISFFEKDNF
HHHHHHHHHHHHEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
C
C
>Mature Secondary Structure
MNEIMTNENLRVVADDLVTVYETDTGEKIVFARELHNNLEVKRQFIDWIEDRIKQYGFKE
CCCCCCCCCCEEEHHHHEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NEDYSVFHKNMKNSTGGRPSKEYVLKLDVAKELAMVQNNNKGREIRRYFIRLEKLLNRTL
CCCHHHHHHHHCCCCCCCCCHHHEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
SNSQLSQINTIVNESLLKMEVKHNIQMEQLKKECSEYYRPTSKTKYDISSYIKERLGISK
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHH
VNEEFELVKKRTLLVLGADKWEDIPKDVLLNSLNLIDESIRIIKSERKTNQISFFEKDNF
HHHHHHHHHHHHEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
C
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]