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The map label for this gene is yqaN [H]

Identifier: 126698515

GI number: 126698515

Start: 1108377

End: 1108784

Strand: Direct

Name: yqaN [H]

Synonym: CD0936

Alternate gene names: 126698515

Gene position: 1108377-1108784 (Clockwise)

Preceding gene: 126698514

Following gene: 126698516

Centisome position: 25.83

GC content: 31.13

Gene sequence:

>408_bases
ATGAGAGTTAATTTTACAATAGATGGAGAACCAGTTGGCAAAGAAAGACCTAGATTTAATTTGGCTACTAAAAGGACCTA
TACACCTAATAAGACTAAGAGTTATGAGGAGTTAATAAAATGGCTGTATCAATCTAAAGTTAAGTATCGTTTTACTGGTT
ATATAAAAATGACTATAAGATGCTATTATTCTATAGCTAAAAGTAACAGTAAAAAGGTTAAGGAGCAGAAAAGAAATAAT
GTGTTAAGACCTAGCAAGAAACCCGATATAGACAATGTCATTAAAGTTGTGGCTGATTCACTTAATGGAATAGCCTATAA
GGATGATACACAGATTGTTGAGGTTGTAGCTAGTAAATATTATAGTGACAAACCAAGAGTTGAAGTTATGATAGAGGATA
TTATCTAA

Upstream 100 bases:

>100_bases
AAATCACATGCAGAACAAGGCAAATTAAGAAAAGAAATGTTGTGGACCAACTTTGAAACTACTAAACAACTTAGTTTGTT
TAAATAAATAGGAGAGAGTA

Downstream 100 bases:

>100_bases
GGAGGACTATAAATATGAATGAGATTATGACAAATGAAAATTTAAGAGTTGTAGCAGATGATTTAGTTACAGTTTATGAA
ACTGATACAGGAGAGAAAAT

Product: phage endonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MRVNFTIDGEPVGKERPRFNLATKRTYTPNKTKSYEELIKWLYQSKVKYRFTGYIKMTIRCYYSIAKSNSKKVKEQKRNN
VLRPSKKPDIDNVIKVVADSLNGIAYKDDTQIVEVVASKYYSDKPRVEVMIEDII

Sequences:

>Translated_135_residues
MRVNFTIDGEPVGKERPRFNLATKRTYTPNKTKSYEELIKWLYQSKVKYRFTGYIKMTIRCYYSIAKSNSKKVKEQKRNN
VLRPSKKPDIDNVIKVVADSLNGIAYKDDTQIVEVVASKYYSDKPRVEVMIEDII
>Mature_135_residues
MRVNFTIDGEPVGKERPRFNLATKRTYTPNKTKSYEELIKWLYQSKVKYRFTGYIKMTIRCYYSIAKSNSKKVKEQKRNN
VLRPSKKPDIDNVIKVVADSLNGIAYKDDTQIVEVVASKYYSDKPRVEVMIEDII

Specific function: Unknown

COG id: COG4570

COG function: function code L; Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008822 [H]

Pfam domain/function: PF05866 RusA [H]

EC number: NA

Molecular weight: Translated: 15838; Mature: 15838

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVNFTIDGEPVGKERPRFNLATKRTYTPNKTKSYEELIKWLYQSKVKYRFTGYIKMTIR
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEEHH
CYYSIAKSNSKKVKEQKRNNVLRPSKKPDIDNVIKVVADSLNGIAYKDDTQIVEVVASKY
HHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEECCCHHHHHHHHHHH
YSDKPRVEVMIEDII
CCCCCCEEEEEECCC
>Mature Secondary Structure
MRVNFTIDGEPVGKERPRFNLATKRTYTPNKTKSYEELIKWLYQSKVKYRFTGYIKMTIR
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEEHH
CYYSIAKSNSKKVKEQKRNNVLRPSKKPDIDNVIKVVADSLNGIAYKDDTQIVEVVASKY
HHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEECCCHHHHHHHHHHH
YSDKPRVEVMIEDII
CCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]