| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698495
Identifier: 126698495
GI number: 126698495
Start: 1099200
End: 1100039
Strand: Direct
Name: 126698495
Synonym: CD0918
Alternate gene names: NA
Gene position: 1099200-1100039 (Clockwise)
Preceding gene: 126698494
Following gene: 126698496
Centisome position: 25.62
GC content: 28.45
Gene sequence:
>840_bases GTGCCAATTTTCAGACAGATATATACAAATTTTTGGACTGACCCAAAGATACAAGAAGAATTTTCAGTAGAGGATAAACT ATTTTATATATACTTACTAACTAACCCTCATACTACTCAAATTGGAATATATACAATAACTAAAAAACAAATAGCTTTTG AAATAGGTTGGACTTTAGAATCTACAAATGCAGTTATGGACAGATTTATTAATCACCATCAACTTATAAGTTATAATTCT GAAACTAGAGAAATAGCAATCAAGAATTGGGCTAAATATAATCTCAATAGAGCAGGAACACCAATGGAGAATTGTGTTAG AAAAGAATTAAGAGAGATTAAAGACAAGTCATTACTAATGCTAATTTATGAACATATAGAAAATAAGAAATTCAAACAGA TATTTGAAGAATATTTTGATGAACTCCGTAACGGTGTACGTAACGAAACTCGTGACGAGGGGAATAACAATAACAATAAC AATAACAATAATAATAACAATAACAACAACAATAAAAAGGTTACGGTGGTTGTGGATAAAATTAAATCATATTTTGATTT AGAATCTAAAGACATTGAAAAAATTGTTGATGTATTCATACATACAAATAAGGGGATTGACTATTTAGAGGAAAAATTGA GGTTGGTCAAAAATACGGAGAGTGTAAAAAGTGTTACAGGCTATTTAATTACGGCGTTAGAAAAGAATTATAAACCTATA CCAAGTAGAAAAAATAAGACTAAGTTTCATAATTTTAACGAGACATTTGGACAATATACAGATGAAGAATTAAAAAACAT GGCTAATAGAGGTCAACTTGAAGAAAGTAAATTCGGTTAA
Upstream 100 bases:
>100_bases GGTGAAAGAGGATGAAGTTGAAGTAAGAGAAGAAGCTGAAAATATAGATTGCCAAATAAGTATGGAAGATAATATGAATT TTGAATAAGTAGGTGATAGA
Downstream 100 bases:
>100_bases GTTAAGTATTCTAGGGAGTAATTATACAATATTACTTCCTAGAAGTTAAAAAACATTGGAGGTAAATAATATGAATGAAT TAGTAAAAATAACGGATAAA
Product: phage protein
Products: NA
Alternate protein names: DNAD Domain Protein; Phage Protein; DNAA Analog DnaD Domain Protein; Primosome DNAD Subunit; DNAD Protein; DNAA Domain-Containing Protein
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MPIFRQIYTNFWTDPKIQEEFSVEDKLFYIYLLTNPHTTQIGIYTITKKQIAFEIGWTLESTNAVMDRFINHHQLISYNS ETREIAIKNWAKYNLNRAGTPMENCVRKELREIKDKSLLMLIYEHIENKKFKQIFEEYFDELRNGVRNETRDEGNNNNNN NNNNNNNNNNNKKVTVVVDKIKSYFDLESKDIEKIVDVFIHTNKGIDYLEEKLRLVKNTESVKSVTGYLITALEKNYKPI PSRKNKTKFHNFNETFGQYTDEELKNMANRGQLEESKFG
Sequences:
>Translated_279_residues MPIFRQIYTNFWTDPKIQEEFSVEDKLFYIYLLTNPHTTQIGIYTITKKQIAFEIGWTLESTNAVMDRFINHHQLISYNS ETREIAIKNWAKYNLNRAGTPMENCVRKELREIKDKSLLMLIYEHIENKKFKQIFEEYFDELRNGVRNETRDEGNNNNNN NNNNNNNNNNNKKVTVVVDKIKSYFDLESKDIEKIVDVFIHTNKGIDYLEEKLRLVKNTESVKSVTGYLITALEKNYKPI PSRKNKTKFHNFNETFGQYTDEELKNMANRGQLEESKFG >Mature_278_residues PIFRQIYTNFWTDPKIQEEFSVEDKLFYIYLLTNPHTTQIGIYTITKKQIAFEIGWTLESTNAVMDRFINHHQLISYNSE TREIAIKNWAKYNLNRAGTPMENCVRKELREIKDKSLLMLIYEHIENKKFKQIFEEYFDELRNGVRNETRDEGNNNNNNN NNNNNNNNNNKKVTVVVDKIKSYFDLESKDIEKIVDVFIHTNKGIDYLEEKLRLVKNTESVKSVTGYLITALEKNYKPIP SRKNKTKFHNFNETFGQYTDEELKNMANRGQLEESKFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33108; Mature: 32977
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIFRQIYTNFWTDPKIQEEFSVEDKLFYIYLLTNPHTTQIGIYTITKKQIAFEIGWTLE CCHHHHHHHHHCCCCCCHHHCCCCCEEEEEEEEECCCCEEEEEEEEEHHHEEEEECCEEC STNAVMDRFINHHQLISYNSETREIAIKNWAKYNLNRAGTPMENCVRKELREIKDKSLLM HHHHHHHHHHCHHHEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH LIYEHIENKKFKQIFEEYFDELRNGVRNETRDEGNNNNNNNNNNNNNNNNNKKVTVVVDK HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHH IKSYFDLESKDIEKIVDVFIHTNKGIDYLEEKLRLVKNTESVKSVTGYLITALEKNYKPI HHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCC PSRKNKTKFHNFNETFGQYTDEELKNMANRGQLEESKFG CCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PIFRQIYTNFWTDPKIQEEFSVEDKLFYIYLLTNPHTTQIGIYTITKKQIAFEIGWTLE CHHHHHHHHHCCCCCCHHHCCCCCEEEEEEEEECCCCEEEEEEEEEHHHEEEEECCEEC STNAVMDRFINHHQLISYNSETREIAIKNWAKYNLNRAGTPMENCVRKELREIKDKSLLM HHHHHHHHHHCHHHEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH LIYEHIENKKFKQIFEEYFDELRNGVRNETRDEGNNNNNNNNNNNNNNNNNKKVTVVVDK HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHH IKSYFDLESKDIEKIVDVFIHTNKGIDYLEEKLRLVKNTESVKSVTGYLITALEKNYKPI HHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCC PSRKNKTKFHNFNETFGQYTDEELKNMANRGQLEESKFG CCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA