Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698494

Identifier: 126698494

GI number: 126698494

Start: 1098285

End: 1099187

Strand: Direct

Name: 126698494

Synonym: CD0917

Alternate gene names: NA

Gene position: 1098285-1099187 (Clockwise)

Preceding gene: 126698493

Following gene: 126698495

Centisome position: 25.6

GC content: 30.45

Gene sequence:

>903_bases
ATGAATAACAAGGCTTTAGAATTAGCAACATGTACCTTAGAATCAGGTCAAATACTTGATTACATGACAGTAAAGAATTA
CTTAGTAAGTGGAAATGGAAATGTAACAGACCAAGAAGTGCTAATGTTTATAGAATTATGTAAGGCTCAAAAATTAAATC
CATTTATAAAAGAAGCATATTTAATAAAGTTTGGTAATTCACCAGCAAATATAGTAGTTGGTAAAGATGTATTTGTAAAA
AGAGCAAATAAAAATCCTAACTTTGAGGGTATGAAAGCAGGAATAGTAACTGTAAATAAAAATGGAGAAATATTTGAAAG
GGAGGGTAGTTTAAAGCTACCACAAGAAGAATTAATCGGTGGATGGTGTGAAGTATCAGTTAGAGGAATGAAGTTTCCTA
TAAAGTCTGTAGTGTCTTTAGAAGAGTATTCAAAGAGTCAAGCTACTTGGAAGCAAATGCCTTGTGTAATGATAAGAAAA
TGTGCTATTGTTACAGCTTTAAGAGAAGCATTCCCAGAAGATTTACAAGGATTATATGATAGTGCAGAAATAAAGACTGT
ACCCGATAAATTACCTCAAAAGCCTATTGAAATAGGTAAGGCAAGTCCATCACAAAAACAAGGAATACTTAAGTTAGCAT
CAATGAAAGGTTTGTATGATTATGAGAATAAAAAAGATACGTCAAAGCTAGAGGAATTTTGTAAAAGTAATGGATTTGAT
TTAAAAGAACTAAAATTTGAAGAAGTAGATGAATTAATTGAATTACTAAGTGAATATGAACCAAAAGATGATTTTATAGA
TGCTGAGTTTGAAGAGGTGAAAGAGGATGAAGTTGAAGTAAGAGAAGAAGCTGAAAATATAGATTGCCAAATAAGTATGG
AAGATAATATGAATTTTGAATAA

Upstream 100 bases:

>100_bases
ATTAAAGACTTTATTAAAAAAGGTCATGAGGTTGAAGGTTGCAGGATTGAATATGGAACTACACTAACAATTCCAAAAGC
TAAAAAAGAGGTGAATTAAT

Downstream 100 bases:

>100_bases
GTAGGTGATAGAGTGCCAATTTTCAGACAGATATATACAAATTTTTGGACTGACCCAAAGATACAAGAAGAATTTTCAGT
AGAGGATAAACTATTTTATA

Product: phage recombination protein

Products: NA

Alternate protein names: Phage Recombination Protein

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MNNKALELATCTLESGQILDYMTVKNYLVSGNGNVTDQEVLMFIELCKAQKLNPFIKEAYLIKFGNSPANIVVGKDVFVK
RANKNPNFEGMKAGIVTVNKNGEIFEREGSLKLPQEELIGGWCEVSVRGMKFPIKSVVSLEEYSKSQATWKQMPCVMIRK
CAIVTALREAFPEDLQGLYDSAEIKTVPDKLPQKPIEIGKASPSQKQGILKLASMKGLYDYENKKDTSKLEEFCKSNGFD
LKELKFEEVDELIELLSEYEPKDDFIDAEFEEVKEDEVEVREEAENIDCQISMEDNMNFE

Sequences:

>Translated_300_residues
MNNKALELATCTLESGQILDYMTVKNYLVSGNGNVTDQEVLMFIELCKAQKLNPFIKEAYLIKFGNSPANIVVGKDVFVK
RANKNPNFEGMKAGIVTVNKNGEIFEREGSLKLPQEELIGGWCEVSVRGMKFPIKSVVSLEEYSKSQATWKQMPCVMIRK
CAIVTALREAFPEDLQGLYDSAEIKTVPDKLPQKPIEIGKASPSQKQGILKLASMKGLYDYENKKDTSKLEEFCKSNGFD
LKELKFEEVDELIELLSEYEPKDDFIDAEFEEVKEDEVEVREEAENIDCQISMEDNMNFE
>Mature_300_residues
MNNKALELATCTLESGQILDYMTVKNYLVSGNGNVTDQEVLMFIELCKAQKLNPFIKEAYLIKFGNSPANIVVGKDVFVK
RANKNPNFEGMKAGIVTVNKNGEIFEREGSLKLPQEELIGGWCEVSVRGMKFPIKSVVSLEEYSKSQATWKQMPCVMIRK
CAIVTALREAFPEDLQGLYDSAEIKTVPDKLPQKPIEIGKASPSQKQGILKLASMKGLYDYENKKDTSKLEEFCKSNGFD
LKELKFEEVDELIELLSEYEPKDDFIDAEFEEVKEDEVEVREEAENIDCQISMEDNMNFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34006; Mature: 34006

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNKALELATCTLESGQILDYMTVKNYLVSGNGNVTDQEVLMFIELCKAQKLNPFIKEAY
CCCCEEEEEEEEECCCCEEHHEEHHHEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHEE
LIKFGNSPANIVVGKDVFVKRANKNPNFEGMKAGIVTVNKNGEIFEREGSLKLPQEELIG
EEEECCCCCEEEECCHHEEEECCCCCCCCCEEEEEEEECCCCCEEECCCCCCCCHHHHCC
GWCEVSVRGMKFPIKSVVSLEEYSKSQATWKQMPCVMIRKCAIVTALREAFPEDLQGLYD
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHC
SAEIKTVPDKLPQKPIEIGKASPSQKQGILKLASMKGLYDYENKKDTSKLEEFCKSNGFD
CCCEEECCHHCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCC
LKELKFEEVDELIELLSEYEPKDDFIDAEFEEVKEDEVEVREEAENIDCQISMEDNMNFE
HHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
>Mature Secondary Structure
MNNKALELATCTLESGQILDYMTVKNYLVSGNGNVTDQEVLMFIELCKAQKLNPFIKEAY
CCCCEEEEEEEEECCCCEEHHEEHHHEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHEE
LIKFGNSPANIVVGKDVFVKRANKNPNFEGMKAGIVTVNKNGEIFEREGSLKLPQEELIG
EEEECCCCCEEEECCHHEEEECCCCCCCCCEEEEEEEECCCCCEEECCCCCCCCHHHHCC
GWCEVSVRGMKFPIKSVVSLEEYSKSQATWKQMPCVMIRKCAIVTALREAFPEDLQGLYD
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHC
SAEIKTVPDKLPQKPIEIGKASPSQKQGILKLASMKGLYDYENKKDTSKLEEFCKSNGFD
CCCEEECCHHCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCC
LKELKFEEVDELIELLSEYEPKDDFIDAEFEEVKEDEVEVREEAENIDCQISMEDNMNFE
HHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA