| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698488
Identifier: 126698488
GI number: 126698488
Start: 1096282
End: 1096479
Strand: Direct
Name: 126698488
Synonym: CD0911
Alternate gene names: NA
Gene position: 1096282-1096479 (Clockwise)
Preceding gene: 126698486
Following gene: 126698489
Centisome position: 25.55
GC content: 26.77
Gene sequence:
>198_bases ATGGCAATTAATGACAACATAAATAAAATTTTAAAAGATAGAGATTTAAAAGCATGGAAATTAGCAAAAGAAATAGGCGT AGATTCAGGGAATTTATATGCAATTTTAAGAGGAGAAAATAAAAATCCAACTATAGATACATTAATAAAAATAGCTGACT ATTTAGACGTTACATTAGACGAACTAGTTGGAAGATAG
Upstream 100 bases:
>100_bases AGAGTATTTTCTTTGAATTACTGTCTAACATGTGTGCACCACCTAACCATATATTTATAGGATTTATCCTACAAATATAG TATATCAAAGGAGGGAAATA
Downstream 100 bases:
>100_bases AAGGGGTGAGATAAAAATGAGTGTAGCATTACAATTCATAGACACAAAAGACTTAGTACAAGAGCTAATGCAAAGAGATG ATACAACAGACATCATCAAG
Product: phage regulatory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 64
Protein sequence:
>65_residues MAINDNINKILKDRDLKAWKLAKEIGVDSGNLYAILRGENKNPTIDTLIKIADYLDVTLDELVGR
Sequences:
>Translated_65_residues MAINDNINKILKDRDLKAWKLAKEIGVDSGNLYAILRGENKNPTIDTLIKIADYLDVTLDELVGR >Mature_64_residues AINDNINKILKDRDLKAWKLAKEIGVDSGNLYAILRGENKNPTIDTLIKIADYLDVTLDELVGR
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7313; Mature: 7181
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAINDNINKILKDRDLKAWKLAKEIGVDSGNLYAILRGENKNPTIDTLIKIADYLDVTLD CCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH ELVGR HHCCC >Mature Secondary Structure AINDNINKILKDRDLKAWKLAKEIGVDSGNLYAILRGENKNPTIDTLIKIADYLDVTLD CCCCCHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH ELVGR HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA